RNA–Protein interactions for RNA: ENST00000584049.5

BDNF-219, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best)

Gene BDNF, Length 4,030 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-219ENST00000584049 IVNS1ABPQ9Y6Y0 642 aa9.12□□□□□ -0.95
BDNF-219ENST00000584049 LPXNO60711 386 aa9.12□□□□□ -0.95
BDNF-219ENST00000584049 DKC1O60832 514 aaKnown RBP eCLIP9.12□□□□□ -0.95
BDNF-219ENST00000584049 MT-ND3P03897 115 aa9.12□□□□□ -0.95
BDNF-219ENST00000584049 CACNA2D1P54289 1103 aa9.12□□□□□ -0.95
BDNF-219ENST00000584049 OVGP1Q12889 678 aa9.12□□□□□ -0.95
BDNF-219ENST00000584049 TBCCQ15814 346 aa9.12□□□□□ -0.95
BDNF-219ENST00000584049 PDCD2Q16342 344 aaPredicted RBP9.12□□□□□ -0.95
BDNF-219ENST00000584049 HP1BP3Q5SSJ5 553 aaPredicted RBP9.12□□□□□ -0.95
BDNF-219ENST00000584049 TDRD10Q5VZ19 366 aaKnown RBP9.12□□□□□ -0.95
BDNF-219ENST00000584049 RINLQ6ZS11 566 aa9.12□□□□□ -0.95
BDNF-219ENST00000584049 C3orf62Q6ZUJ4 267 aa9.12□□□□□ -0.95
BDNF-219ENST00000584049 NET1Q7Z628 596 aaPredicted RBP9.12□□□□□ -0.95
BDNF-219ENST00000584049 ZC3H18Q86VM9 953 aaKnown RBP9.12□□□□□ -0.95
BDNF-219ENST00000584049 ANKMY2Q8IV38 441 aa9.12□□□□□ -0.95
BDNF-219ENST00000584049 MCPH1Q8NEM0 835 aa9.12□□□□□ -0.95
BDNF-219ENST00000584049 CCDC110Q8TBZ0 833 aa9.12□□□□□ -0.95
BDNF-219ENST00000584049 BSNDQ8WZ55 320 aa9.12□□□□□ -0.95
BDNF-219ENST00000584049 APBB2Q92870 758 aa9.12□□□□□ -0.95
BDNF-219ENST00000584049 FAM213AQ9BRX8 229 aa9.12□□□□□ -0.95
BDNF-219ENST00000584049 KIFC3Q9BVG8 833 aa9.12□□□□□ -0.95
BDNF-219ENST00000584049 TRIM4Q9C037 500 aa9.12□□□□□ -0.95
BDNF-219ENST00000584049 DBNDD1Q9H9R9 158 aa9.12□□□□□ -0.95
BDNF-219ENST00000584049 KCNK4Q9NYG8 393 aa9.12□□□□□ -0.95
BDNF-219ENST00000584049 SLC17A7Q9P2U7 560 aa9.12□□□□□ -0.95
BDNF-219ENST00000584049 CCPG1Q9ULG6 757 aa9.12□□□□□ -0.95
BDNF-219ENST00000584049 STRIP2Q9ULQ0 834 aa9.12□□□□□ -0.95
BDNF-219ENST00000584049 ZNRF3Q9ULT6 936 aa9.12□□□□□ -0.95
BDNF-219ENST00000584049 STYXL1Q9Y6J8 313 aa9.12□□□□□ -0.95
BDNF-219ENST00000584049 SCN9AQ15858 1988 aa9.12□□□□□ -0.95
BDNF-219ENST00000584049 ARID2Q68CP9 1835 aa9.12□□□□□ -0.95
BDNF-219ENST00000584049 FCHO1O14526 889 aa9.12□□□□□ -0.95
BDNF-219ENST00000584049 SSTR1P30872 391 aa9.12□□□□□ -0.95
BDNF-219ENST00000584049 PTGER2P43116 358 aa9.12□□□□□ -0.95
BDNF-219ENST00000584049 ZNF132P52740 706 aa9.12□□□□□ -0.95
BDNF-219ENST00000584049 MRPS9P82933 396 aaKnown RBP9.12□□□□□ -0.95
BDNF-219ENST00000584049 ZNF252P-AS1Q0IIN9 211 aa9.12□□□□□ -0.95
BDNF-219ENST00000584049 DYNC1I2Q13409 638 aaKnown RBP9.12□□□□□ -0.95
BDNF-219ENST00000584049 EFTUD2Q15029 972 aaKnown RBP eCLIP9.12□□□□□ -0.95
BDNF-219ENST00000584049 ATP13A4Q4VNC1 1196 aa9.12□□□□□ -0.95
BDNF-219ENST00000584049 ZFYVE27Q5T4F4 411 aa9.12□□□□□ -0.95
BDNF-219ENST00000584049 PLA2G4FQ68DD2 849 aa9.12□□□□□ -0.95
BDNF-219ENST00000584049 TMPRSS6Q8IU80 811 aa9.12□□□□□ -0.95
BDNF-219ENST00000584049 SCYL3Q8IZE3 742 aa9.12□□□□□ -0.95
BDNF-219ENST00000584049 PDIK1LQ8N165 341 aa9.12□□□□□ -0.95
BDNF-219ENST00000584049 PDCD7Q8N8D1 485 aaKnown RBP9.12□□□□□ -0.95
BDNF-219ENST00000584049 PTPRN2Q92932 1015 aa9.12□□□□□ -0.95
BDNF-219ENST00000584049 KLHL11Q9NVR0 708 aa9.12□□□□□ -0.95
BDNF-219ENST00000584049 ARHGAP28Q9P2N2 729 aa9.12□□□□□ -0.95
BDNF-219ENST00000584049 TMEM150BA6NC51 233 aa9.11□□□□□ -0.95
BDNF-219ENST00000584049 PGM1P36871 562 aa9.11□□□□□ -0.95
BDNF-219ENST00000584049 C6orf163Q5TEZ5 329 aa9.11□□□□□ -0.95
BDNF-219ENST00000584049 DNAJC24Q6P3W2 148 aa9.11□□□□□ -0.95
BDNF-219ENST00000584049 TMEM270Q6UE05 265 aa9.11□□□□□ -0.95
BDNF-219ENST00000584049 BBS12Q6ZW61 710 aa9.11□□□□□ -0.95
BDNF-219ENST00000584049 LRRC6Q86X45 466 aa9.11□□□□□ -0.95
BDNF-219ENST00000584049 EGFL6Q8IUX8 553 aa9.11□□□□□ -0.95
BDNF-219ENST00000584049 PASD1Q8IV76 773 aa9.11□□□□□ -0.95
BDNF-219ENST00000584049 PALM2Q8IXS6 379 aa9.11□□□□□ -0.95
BDNF-219ENST00000584049 FGD4Q96M96 766 aa9.11□□□□□ -0.95
BDNF-219ENST00000584049 TMEM121Q9BTD3 319 aa9.11□□□□□ -0.95
BDNF-219ENST00000584049 ZNF518BQ9C0D4 1074 aa9.11□□□□□ -0.95
BDNF-219ENST00000584049 TDRD3Q9H7E2 651 aaKnown RBP9.11□□□□□ -0.95
BDNF-219ENST00000584049 GPAMQ9HCL2 828 aa9.11□□□□□ -0.95
BDNF-219ENST00000584049 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.11□□□□□ -0.95
BDNF-219ENST00000584049 WDR91A4D1P6 747 aa9.11□□□□□ -0.95
BDNF-219ENST00000584049 MAP3K13O43283 966 aa9.11□□□□□ -0.95
BDNF-219ENST00000584049 VNN1O95497 513 aa9.11□□□□□ -0.95
BDNF-219ENST00000584049 IFNB1P01574 187 aa9.11□□□□□ -0.95
BDNF-219ENST00000584049 CFHP08603 1231 aa9.11□□□□□ -0.95
BDNF-219ENST00000584049 RPL7AP62424 266 aaKnown RBP9.11□□□□□ -0.95
BDNF-219ENST00000584049 TAZQ16635 292 aa9.11□□□□□ -0.95
BDNF-219ENST00000584049 DNAL1Q4LDG9 190 aa9.11□□□□□ -0.95
BDNF-219ENST00000584049 SH2D5Q6ZV89 423 aa9.11□□□□□ -0.95
BDNF-219ENST00000584049 RHPN2Q8IUC4 686 aa9.11□□□□□ -0.95
BDNF-219ENST00000584049 FBXO36Q8NEA4 188 aa9.11□□□□□ -0.95
BDNF-219ENST00000584049 WDR60Q8WVS4 1066 aa9.11□□□□□ -0.95
BDNF-219ENST00000584049 SLC44A1Q8WWI5 657 aa9.11□□□□□ -0.95
BDNF-219ENST00000584049 CLEC4DQ8WXI8 215 aa9.11□□□□□ -0.95
BDNF-219ENST00000584049 ELMO3Q96BJ8 720 aa9.11□□□□□ -0.95
BDNF-219ENST00000584049 MRRFQ96E11 262 aaKnown RBP9.11□□□□□ -0.95
BDNF-219ENST00000584049 C7orf26Q96N11 449 aa9.11□□□□□ -0.95
BDNF-219ENST00000584049 WDR83Q9BRX9 315 aaKnown RBP9.11□□□□□ -0.95
BDNF-219ENST00000584049 KRT82Q9NSB4 513 aa9.11□□□□□ -0.95
BDNF-219ENST00000584049 IL1RAPL1Q9NZN1 696 aa9.11□□□□□ -0.95
BDNF-219ENST00000584049 TNNI1P19237 187 aa9.11□□□□□ -0.95
BDNF-219ENST00000584049 PLCB3Q01970 1234 aa9.11□□□□□ -0.95
BDNF-219ENST00000584049 TBC1D10BQ4KMP7 808 aaPredicted RBP9.11□□□□□ -0.95
BDNF-219ENST00000584049 PPP1R15BQ5SWA1 713 aa9.11□□□□□ -0.95
BDNF-219ENST00000584049 FNBP1LQ5T0N5 605 aa9.11□□□□□ -0.95
BDNF-219ENST00000584049 RNF220Q5VTB9 566 aa9.11□□□□□ -0.95
BDNF-219ENST00000584049 ANO5Q75V66 913 aa9.11□□□□□ -0.95
BDNF-219ENST00000584049 ADGRG6Q86SQ4 1221 aa9.11□□□□□ -0.95
BDNF-219ENST00000584049 UBR7Q8N806 425 aa9.11□□□□□ -0.95
BDNF-219ENST00000584049 APOBEC3GQ9HC16 384 aaKnown RBP9.11□□□□□ -0.95
BDNF-219ENST00000584049 ARHGEF4Q9NR80 690 aa9.11□□□□□ -0.95
BDNF-219ENST00000584049 FBXO6Q9NRD1 293 aaPredicted RBP9.11□□□□□ -0.95
BDNF-219ENST00000584049 PPME1Q9Y570 386 aa9.11□□□□□ -0.95
BDNF-219ENST00000584049 MYH9P35579 1960 aaKnown RBP9.11□□□□□ -0.95
BDNF-219ENST00000584049 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms