RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 ARHGAP15Q53QZ3 475 aa10.58□□□□□ -0.72
SKA2-208ENST00000583927 C1orf220Q5T0J3 134 aa10.58□□□□□ -0.72
SKA2-208ENST00000583927 FOXR2Q6PJQ5 311 aa10.58□□□□□ -0.72
SKA2-208ENST00000583927 VITQ6UXI7 678 aa10.58□□□□□ -0.72
SKA2-208ENST00000583927 ZC3H3Q8IXZ2 948 aaKnown RBP10.58□□□□□ -0.72
SKA2-208ENST00000583927 ZSCAN18Q8TBC5 510 aaPredicted RBP10.58□□□□□ -0.72
SKA2-208ENST00000583927 MYCBPAPQ8TBZ2 947 aa10.58□□□□□ -0.72
SKA2-208ENST00000583927 IRF7Q92985 503 aa10.58□□□□□ -0.72
SKA2-208ENST00000583927 FAXDC2Q96IV6 333 aa10.58□□□□□ -0.72
SKA2-208ENST00000583927 SPATA17Q96L03 361 aa10.58□□□□□ -0.72
SKA2-208ENST00000583927 MMS19Q96T76 1030 aa10.58□□□□□ -0.72
SKA2-208ENST00000583927 LPIN3Q9BQK8 851 aa10.58□□□□□ -0.72
SKA2-208ENST00000583927 SYT15Q9BQS2 421 aa10.58□□□□□ -0.72
SKA2-208ENST00000583927 TRMT61BQ9BVS5 477 aaKnown RBP10.58□□□□□ -0.72
SKA2-208ENST00000583927 PLA2G2FQ9BZM2 168 aa10.58□□□□□ -0.72
SKA2-208ENST00000583927 TASP1Q9H6P5 420 aa10.58□□□□□ -0.72
SKA2-208ENST00000583927 CRTAC1Q9NQ79 661 aa10.58□□□□□ -0.72
SKA2-208ENST00000583927 RIF1Q5UIP0 2472 aaKnown RBP10.58□□□□□ -0.72
SKA2-208ENST00000583927 KANSL1LA0AUZ9 987 aa10.57□□□□□ -0.72
SKA2-208ENST00000583927 ARNTLO00327 626 aa10.57□□□□□ -0.72
SKA2-208ENST00000583927 PHACTR2O75167 634 aa10.57□□□□□ -0.72
SKA2-208ENST00000583927 SOAT2O75908 522 aa10.57□□□□□ -0.72
SKA2-208ENST00000583927 ASS1P00966 412 aaKnown RBP10.57□□□□□ -0.72
SKA2-208ENST00000583927 F11P03951 625 aa10.57□□□□□ -0.72
SKA2-208ENST00000583927 P4HA1P13674 534 aa10.57□□□□□ -0.72
SKA2-208ENST00000583927 PFKLP17858 780 aa10.57□□□□□ -0.72
SKA2-208ENST00000583927 ACAT1P24752 427 aaKnown RBP10.57□□□□□ -0.72
SKA2-208ENST00000583927 CYP2F1P24903 491 aa10.57□□□□□ -0.72
SKA2-208ENST00000583927 GTF2H1P32780 548 aa10.57□□□□□ -0.72
SKA2-208ENST00000583927 PSMC2P35998 433 aaKnown RBP10.57□□□□□ -0.72
SKA2-208ENST00000583927 PPP1R2P41236 205 aa10.57□□□□□ -0.72
SKA2-208ENST00000583927 MAGEA9P43362 315 aa10.57□□□□□ -0.72
SKA2-208ENST00000583927 VAMP7P51809 220 aa10.57□□□□□ -0.72
SKA2-208ENST00000583927 NLRP12P59046 1061 aa10.57□□□□□ -0.72
SKA2-208ENST00000583927 ADAM9Q13443 819 aa10.57□□□□□ -0.72
SKA2-208ENST00000583927 ZNF699Q32M78 642 aa10.57□□□□□ -0.72
SKA2-208ENST00000583927 ZNF667Q5HYK9 610 aa10.57□□□□□ -0.72
SKA2-208ENST00000583927 CEP135Q66GS9 1140 aa10.57□□□□□ -0.72
SKA2-208ENST00000583927 C1orf228Q6PIY5 440 aa10.57□□□□□ -0.72
SKA2-208ENST00000583927 SV2AQ7L0J3 742 aa10.57□□□□□ -0.72
SKA2-208ENST00000583927 TMEM150AQ86TG1 271 aa10.57□□□□□ -0.72
SKA2-208ENST00000583927 SPATA2LQ8IUW3 424 aaPredicted RBP10.57□□□□□ -0.72
SKA2-208ENST00000583927 ARID3BQ8IVW6 561 aaPredicted RBP10.57□□□□□ -0.72
SKA2-208ENST00000583927 CCDC105Q8IYK2 499 aa10.57□□□□□ -0.72
SKA2-208ENST00000583927 FLCNQ8NFG4 579 aa10.57□□□□□ -0.72
SKA2-208ENST00000583927 PJA1Q8NG27 643 aa10.57□□□□□ -0.72
SKA2-208ENST00000583927 FAM200AQ8TCP9 573 aa10.57□□□□□ -0.72
SKA2-208ENST00000583927 MSANTD3Q96H12 275 aa10.57□□□□□ -0.72
SKA2-208ENST00000583927 GCNAQ96QF7 691 aa10.57□□□□□ -0.72
SKA2-208ENST00000583927 NELL2Q99435 816 aa10.57□□□□□ -0.72
SKA2-208ENST00000583927 PI4K2AQ9BTU6 479 aa10.57□□□□□ -0.72
SKA2-208ENST00000583927 SNX25Q9H3E2 840 aa10.57□□□□□ -0.72
SKA2-208ENST00000583927 ATXN3LQ9H3M9 355 aa10.57□□□□□ -0.72
SKA2-208ENST00000583927 FAM124BQ9H5Z6 455 aaPredicted RBP10.57□□□□□ -0.72
SKA2-208ENST00000583927 TBC1D17Q9HA65 648 aa10.57□□□□□ -0.72
SKA2-208ENST00000583927 EHD2Q9NZN4 543 aa10.57□□□□□ -0.72
SKA2-208ENST00000583927 DLGAP2Q9P1A6 1054 aa10.57□□□□□ -0.72
SKA2-208ENST00000583927 MAGEC2Q9UBF1 373 aaPredicted RBP10.57□□□□□ -0.72
SKA2-208ENST00000583927 CA14Q9ULX7 337 aa10.57□□□□□ -0.72
SKA2-208ENST00000583927 PCDHA5Q9Y5H7 936 aa10.57□□□□□ -0.72
SKA2-208ENST00000583927 FAM186AA6NE01 2351 aa10.57□□□□□ -0.72
SKA2-208ENST00000583927 ZNF292O60281 2723 aa10.57□□□□□ -0.72
SKA2-208ENST00000583927 MYOFQ9NZM1 2061 aa10.56□□□□□ -0.72
SKA2-208ENST00000583927 HEPACAM2A8MVW5 462 aa10.56□□□□□ -0.72
SKA2-208ENST00000583927 TRIM66O15016 1216 aa10.56□□□□□ -0.72
SKA2-208ENST00000583927 CHADO15335 359 aa10.56□□□□□ -0.72
SKA2-208ENST00000583927 PI15O43692 258 aa10.56□□□□□ -0.72
SKA2-208ENST00000583927 KRT13P13646 458 aa10.56□□□□□ -0.72
SKA2-208ENST00000583927 GJA1P17302 382 aa10.56□□□□□ -0.72
SKA2-208ENST00000583927 PTPN1P18031 435 aaKnown RBP10.56□□□□□ -0.72
SKA2-208ENST00000583927 PRCPP42785 496 aa10.56□□□□□ -0.72
SKA2-208ENST00000583927 NOP14P78316 857 aaKnown RBP10.56□□□□□ -0.72
SKA2-208ENST00000583927 DLG4P78352 724 aa10.56□□□□□ -0.72
SKA2-208ENST00000583927 LRRC63Q05C16 580 aa10.56□□□□□ -0.72
SKA2-208ENST00000583927 BIRC3Q13489 604 aa10.56□□□□□ -0.72
SKA2-208ENST00000583927 ZNF268Q14587 947 aaPredicted RBP10.56□□□□□ -0.72
SKA2-208ENST00000583927 TAF12Q16514 161 aa10.56□□□□□ -0.72
SKA2-208ENST00000583927 GPR158Q5T848 1215 aa10.56□□□□□ -0.72
SKA2-208ENST00000583927 UNC93AQ86WB7 457 aa10.56□□□□□ -0.72
SKA2-208ENST00000583927 FAM186BQ8IYM0 893 aa10.56□□□□□ -0.72
SKA2-208ENST00000583927 ADSSL1Q8N142 457 aa10.56□□□□□ -0.72
SKA2-208ENST00000583927 B3GALNT2Q8NCR0 500 aa10.56□□□□□ -0.72
SKA2-208ENST00000583927 GIPC2Q8TF65 315 aa10.56□□□□□ -0.72
SKA2-208ENST00000583927 SMARCE1Q969G3 411 aa10.56□□□□□ -0.72
SKA2-208ENST00000583927 PCED1BQ96HM7 432 aa10.56□□□□□ -0.72
SKA2-208ENST00000583927 TNIP3Q96KP6 325 aa10.56□□□□□ -0.72
SKA2-208ENST00000583927 C8orf48Q96LL4 319 aa10.56□□□□□ -0.72
SKA2-208ENST00000583927 MRPL45Q9BRJ2 306 aaKnown RBP10.56□□□□□ -0.72
SKA2-208ENST00000583927 TTLL2Q9BWV7 592 aa10.56□□□□□ -0.72
SKA2-208ENST00000583927 ELOVL4Q9GZR5 314 aa10.56□□□□□ -0.72
SKA2-208ENST00000583927 SLITRK6Q9H5Y7 841 aa10.56□□□□□ -0.72
SKA2-208ENST00000583927 BRD9Q9H8M2 597 aa10.56□□□□□ -0.72
SKA2-208ENST00000583927 KIF9Q9HAQ2 790 aa10.56□□□□□ -0.72
SKA2-208ENST00000583927 MAPK8IP1Q9UQF2 711 aa10.56□□□□□ -0.72
SKA2-208ENST00000583927 SIT1Q9Y3P8 196 aa10.56□□□□□ -0.72
SKA2-208ENST00000583927 NME7Q9Y5B8 376 aa10.56□□□□□ -0.72
SKA2-208ENST00000583927 ATG2BQ96BY7 2078 aa10.56□□□□□ -0.72
SKA2-208ENST00000583927 KIAA1549LQ6ZVL6 1849 aa10.56□□□□□ -0.72
SKA2-208ENST00000583927 NCANO14594 1321 aa10.56□□□□□ -0.72
SKA2-208ENST00000583927 COL4A3Q01955 1670 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms