RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 WDR24Q96S15 920 aa12.73□□□□□ -0.37
GGA3-217ENST00000583667 RTKNQ9BST9 563 aa12.73□□□□□ -0.37
GGA3-217ENST00000583667 EIF2AQ9BY44 585 aaKnown RBP12.73□□□□□ -0.37
GGA3-217ENST00000583667 BCO2Q9BYV7 579 aa12.73□□□□□ -0.37
GGA3-217ENST00000583667 IRX2Q9BZI1 471 aaPredicted RBP12.73□□□□□ -0.37
GGA3-217ENST00000583667 CDV3Q9UKY7 258 aaKnown RBP12.73□□□□□ -0.37
GGA3-217ENST00000583667 GUCA1BQ9UMX6 200 aa12.73□□□□□ -0.37
GGA3-217ENST00000583667 ST3GAL5Q9UNP4 418 aa12.73□□□□□ -0.37
GGA3-217ENST00000583667 PIN4Q9Y237 131 aaKnown RBP12.73□□□□□ -0.37
GGA3-217ENST00000583667 GINS2Q9Y248 185 aa12.73□□□□□ -0.37
GGA3-217ENST00000583667 ANK1P16157 1881 aa12.72□□□□□ -0.37
GGA3-217ENST00000583667 ANO9A1A5B4 782 aa12.72□□□□□ -0.37
GGA3-217ENST00000583667 ANKRD62A6NC57 917 aa12.72□□□□□ -0.37
GGA3-217ENST00000583667 PRR5-ARHGAP8B1AHC4 643 aa12.72□□□□□ -0.37
GGA3-217ENST00000583667 XPOTO43592 962 aaKnown RBP12.72□□□□□ -0.37
GGA3-217ENST00000583667 RTN2O75298 545 aa12.72□□□□□ -0.37
GGA3-217ENST00000583667 NFICP08651 508 aa12.72□□□□□ -0.37
GGA3-217ENST00000583667 FAM163BP0C2L3 166 aa12.72□□□□□ -0.37
GGA3-217ENST00000583667 TMEM253P0C7T8 217 aa12.72□□□□□ -0.37
GGA3-217ENST00000583667 PRLRP16471 622 aa12.72□□□□□ -0.37
GGA3-217ENST00000583667 HADHBP55084 474 aaKnown RBP12.72□□□□□ -0.37
GGA3-217ENST00000583667 ARHGAP8P85298 464 aa12.72□□□□□ -0.37
GGA3-217ENST00000583667 DSC3Q14574 896 aa12.72□□□□□ -0.37
GGA3-217ENST00000583667 IFI16Q16666 785 aaKnown RBP12.72□□□□□ -0.37
GGA3-217ENST00000583667 PAPD7Q5XG87 772 aaKnown RBP12.72□□□□□ -0.37
GGA3-217ENST00000583667 TRIM72Q6ZMU5 477 aa12.72□□□□□ -0.37
GGA3-217ENST00000583667 NOP9Q86U38 636 aaKnown RBP12.72□□□□□ -0.37
GGA3-217ENST00000583667 GLYCTKQ8IVS8 523 aa12.72□□□□□ -0.37
GGA3-217ENST00000583667 GPR161Q8N6U8 529 aaKnown RBP12.72□□□□□ -0.37
GGA3-217ENST00000583667 LRRC52Q8N7C0 313 aa12.72□□□□□ -0.37
GGA3-217ENST00000583667 SMG8Q8ND04 991 aaKnown RBP12.72□□□□□ -0.37
GGA3-217ENST00000583667 DPP3Q9NY33 737 aa12.72□□□□□ -0.37
GGA3-217ENST00000583667 SNTG2Q9NY99 539 aa12.72□□□□□ -0.37
GGA3-217ENST00000583667 UBQLN1Q9UMX0 589 aaKnown RBP12.72□□□□□ -0.37
GGA3-217ENST00000583667 DUSP10Q9Y6W6 482 aa12.72□□□□□ -0.37
GGA3-217ENST00000583667 CTAGE9A4FU28 777 aa12.71□□□□□ -0.37
GGA3-217ENST00000583667 TACC1O75410 805 aa12.71□□□□□ -0.37
GGA3-217ENST00000583667 P4HA1P13674 534 aa12.71□□□□□ -0.37
GGA3-217ENST00000583667 ASPAP45381 313 aa12.71□□□□□ -0.37
GGA3-217ENST00000583667 PDE6CP51160 858 aa12.71□□□□□ -0.37
GGA3-217ENST00000583667 FMO1Q01740 532 aa12.71□□□□□ -0.37
GGA3-217ENST00000583667 UBE3AQ05086 875 aa12.71□□□□□ -0.37
GGA3-217ENST00000583667 ZNF699Q32M78 642 aa12.71□□□□□ -0.37
GGA3-217ENST00000583667 PAN2Q504Q3 1202 aaKnown RBP12.71□□□□□ -0.37
GGA3-217ENST00000583667 ZNF667Q5HYK9 610 aa12.71□□□□□ -0.37
GGA3-217ENST00000583667 VARS2Q5ST30 1063 aaKnown RBP12.71□□□□□ -0.37
GGA3-217ENST00000583667 SPOPLQ6IQ16 392 aa12.71□□□□□ -0.37
GGA3-217ENST00000583667 LLGL2Q6P1M3 1020 aa12.71□□□□□ -0.37
GGA3-217ENST00000583667 SLC47A2Q86VL8 602 aa12.71□□□□□ -0.37
GGA3-217ENST00000583667 HACE1Q8IYU2 909 aa12.71□□□□□ -0.37
GGA3-217ENST00000583667 SIX5Q8N196 739 aa12.71□□□□□ -0.37
GGA3-217ENST00000583667 SLC35F6Q8N357 371 aa12.71□□□□□ -0.37
GGA3-217ENST00000583667 BEST2Q8NFU1 509 aa12.71□□□□□ -0.37
GGA3-217ENST00000583667 MYRIPQ8NFW9 859 aa12.71□□□□□ -0.37
GGA3-217ENST00000583667 FAM84AQ96KN4 292 aa12.71□□□□□ -0.37
GGA3-217ENST00000583667 NECTIN4Q96NY8 510 aa12.71□□□□□ -0.37
GGA3-217ENST00000583667 NOX5Q96PH1 765 aa12.71□□□□□ -0.37
GGA3-217ENST00000583667 NAPGQ99747 312 aaPredicted RBP12.71□□□□□ -0.37
GGA3-217ENST00000583667 TRIM6Q9C030 488 aaPredicted RBP12.71□□□□□ -0.37
GGA3-217ENST00000583667 ADAM7Q9H2U9 754 aa12.71□□□□□ -0.37
GGA3-217ENST00000583667 TRIM10Q9UDY6 481 aa12.71□□□□□ -0.37
GGA3-217ENST00000583667 R3HCC1Q9Y3T6 440 aaKnown RBP12.71□□□□□ -0.37
GGA3-217ENST00000583667 JRKLQ9Y4A0 524 aa12.71□□□□□ -0.37
GGA3-217ENST00000583667 IPPQ9Y573 584 aa12.71□□□□□ -0.37
GGA3-217ENST00000583667 ZFYVE26Q68DK2 2539 aa12.7□□□□□ -0.38
GGA3-217ENST00000583667 SMIM28A0A1B0GU29 152 aa12.7□□□□□ -0.38
GGA3-217ENST00000583667 PIRO00625 290 aa12.7□□□□□ -0.38
GGA3-217ENST00000583667 FSCN2O14926 492 aa12.7□□□□□ -0.38
GGA3-217ENST00000583667 RECQL4O94761 1208 aa12.7□□□□□ -0.38
GGA3-217ENST00000583667 MTA2O94776 668 aa12.7□□□□□ -0.38
GGA3-217ENST00000583667 CYP1A1P04798 512 aaPredicted RBP12.7□□□□□ -0.38
GGA3-217ENST00000583667 ITGB3P05106 788 aa12.7□□□□□ -0.38
GGA3-217ENST00000583667 PAEPP09466 180 aa12.7□□□□□ -0.38
GGA3-217ENST00000583667 GHRP10912 638 aa12.7□□□□□ -0.38
GGA3-217ENST00000583667 SKIP12755 728 aa12.7□□□□□ -0.38
GGA3-217ENST00000583667 USP8P40818 1118 aa12.7□□□□□ -0.38
GGA3-217ENST00000583667 RAB27AP51159 221 aa12.7□□□□□ -0.38
GGA3-217ENST00000583667 GALCP54803 685 aa12.7□□□□□ -0.38
GGA3-217ENST00000583667 SCARA3Q6AZY7 606 aa12.7□□□□□ -0.38
GGA3-217ENST00000583667 PLCD3Q8N3E9 789 aa12.7□□□□□ -0.38
GGA3-217ENST00000583667 SLC20A1Q8WUM9 679 aa12.7□□□□□ -0.38
GGA3-217ENST00000583667 ZNF592Q92610 1267 aa12.7□□□□□ -0.38
GGA3-217ENST00000583667 KIF12Q96FN5 646 aa12.7□□□□□ -0.38
GGA3-217ENST00000583667 HPDLQ96IR7 371 aa12.7□□□□□ -0.38
GGA3-217ENST00000583667 VCPIP1Q96JH7 1222 aa12.7□□□□□ -0.38
GGA3-217ENST00000583667 ZMAT2Q96NC0 199 aaKnown RBP12.7□□□□□ -0.38
GGA3-217ENST00000583667 PCDHB18PQ96TA0 734 aa12.7□□□□□ -0.38
GGA3-217ENST00000583667 ARID3AQ99856 593 aa12.7□□□□□ -0.38
GGA3-217ENST00000583667 CISHQ9NSE2 258 aa12.7□□□□□ -0.38
GGA3-217ENST00000583667 RNF216Q9NWF9 866 aaPredicted RBP12.7□□□□□ -0.38
GGA3-217ENST00000583667 SALL4Q9UJQ4 1053 aa12.7□□□□□ -0.38
GGA3-217ENST00000583667 KIAA1257Q9ULG3 409 aa12.7□□□□□ -0.38
GGA3-217ENST00000583667 PADI3Q9ULW8 664 aa12.7□□□□□ -0.38
GGA3-217ENST00000583667 GIT1Q9Y2X7 761 aa12.7□□□□□ -0.38
GGA3-217ENST00000583667 PCDHB4Q9Y5E5 795 aa12.7□□□□□ -0.38
GGA3-217ENST00000583667 NCANO14594 1321 aa12.69□□□□□ -0.38
GGA3-217ENST00000583667 STK25O00506 426 aa12.69□□□□□ -0.38
GGA3-217ENST00000583667 RIOK3O14730 519 aaKnown RBP12.69□□□□□ -0.38
GGA3-217ENST00000583667 INPPL1O15357 1258 aa12.69□□□□□ -0.38
GGA3-217ENST00000583667 UNGP13051 313 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms