RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 EPSTI1Q96J88 318 aa19.22■□□□□ 0.67
MKS1-209ENST00000580127 ZC3H10Q96K80 434 aaKnown RBP19.22■□□□□ 0.67
MKS1-209ENST00000580127 MYRFLQ96LU7 910 aa19.22■□□□□ 0.67
MKS1-209ENST00000580127 HPS4Q9NQG7 708 aa19.22■□□□□ 0.67
MKS1-209ENST00000580127 C2orf42Q9NWW7 574 aa19.22■□□□□ 0.67
MKS1-209ENST00000580127 GDAP2Q9NXN4 497 aa19.22■□□□□ 0.67
MKS1-209ENST00000580127 EHD2Q9NZN4 543 aa19.22■□□□□ 0.67
MKS1-209ENST00000580127 CCL26Q9Y258 94 aa19.22■□□□□ 0.67
MKS1-209ENST00000580127 DNAH14Q0VDD8 3507 aa19.21■□□□□ 0.67
MKS1-209ENST00000580127 KIAA0391O15091 583 aaKnown RBP19.21■□□□□ 0.67
MKS1-209ENST00000580127 GDF9O60383 454 aa19.21■□□□□ 0.67
MKS1-209ENST00000580127 EPN2O95208 641 aa19.21■□□□□ 0.67
MKS1-209ENST00000580127 CKMP06732 381 aa19.21■□□□□ 0.67
MKS1-209ENST00000580127 IDEP14735 1019 aa19.21■□□□□ 0.67
MKS1-209ENST00000580127 CYP2F1P24903 491 aa19.21■□□□□ 0.67
MKS1-209ENST00000580127 RAP1GAPP47736 663 aa19.21■□□□□ 0.67
MKS1-209ENST00000580127 GRIN1Q05586 938 aa19.21■□□□□ 0.67
MKS1-209ENST00000580127 SURF1Q15526 300 aa19.21■□□□□ 0.67
MKS1-209ENST00000580127 MAPRE1Q15691 268 aaKnown RBP19.21■□□□□ 0.67
MKS1-209ENST00000580127 DDR2Q16832 855 aa19.21■□□□□ 0.67
MKS1-209ENST00000580127 INTS6LQ5JSJ4 861 aaKnown RBP19.21■□□□□ 0.67
MKS1-209ENST00000580127 TRIM68Q6AZZ1 485 aa19.21■□□□□ 0.67
MKS1-209ENST00000580127 C4orf50Q6ZRC1 276 aa19.21■□□□□ 0.67
MKS1-209ENST00000580127 DPH6Q7L8W6 267 aa19.21■□□□□ 0.67
MKS1-209ENST00000580127 BRSK2Q8IWQ3 736 aa19.21■□□□□ 0.67
MKS1-209ENST00000580127 TOP6BLQ8N6T0 577 aa19.21■□□□□ 0.67
MKS1-209ENST00000580127 TTC16Q8NEE8 873 aa19.21■□□□□ 0.67
MKS1-209ENST00000580127 LRRC15Q8TF66 581 aa19.21■□□□□ 0.67
MKS1-209ENST00000580127 NOC3LQ8WTT2 800 aaKnown RBP19.21■□□□□ 0.67
MKS1-209ENST00000580127 ACDQ96AP0 544 aa19.21■□□□□ 0.67
MKS1-209ENST00000580127 ECT2Q9H8V3 914 aa19.21■□□□□ 0.67
MKS1-209ENST00000580127 TRPC7Q9HCX4 862 aa19.21■□□□□ 0.67
MKS1-209ENST00000580127 VPS45Q9NRW7 570 aa19.21■□□□□ 0.67
MKS1-209ENST00000580127 TBC1D7Q9P0N9 293 aa19.21■□□□□ 0.67
MKS1-209ENST00000580127 GTF3C4Q9UKN8 822 aa19.21■□□□□ 0.67
MKS1-209ENST00000580127 SRPRBQ9Y5M8 271 aaKnown RBP19.21■□□□□ 0.67
MKS1-209ENST00000580127 SNX9Q9Y5X1 595 aa19.21■□□□□ 0.67
MKS1-209ENST00000580127 CNOT1A5YKK6 2376 aaKnown RBP19.2■□□□□ 0.66
MKS1-209ENST00000580127 GREB1Q4ZG55 1949 aa19.2■□□□□ 0.66
MKS1-209ENST00000580127 VPS37CA5D8V6 355 aaPredicted RBP19.2■□□□□ 0.66
MKS1-209ENST00000580127 RNF40O75150 1001 aa19.2■□□□□ 0.66
MKS1-209ENST00000580127 PPP1R37O75864 691 aa19.2■□□□□ 0.66
MKS1-209ENST00000580127 NOL4O94818 638 aa19.2■□□□□ 0.66
MKS1-209ENST00000580127 TMEM191BP0C7N4 346 aa19.2■□□□□ 0.66
MKS1-209ENST00000580127 PXNP49023 591 aaPredicted RBP19.2■□□□□ 0.66
MKS1-209ENST00000580127 PSMD2Q13200 908 aa19.2■□□□□ 0.66
MKS1-209ENST00000580127 MTF1Q14872 753 aa19.2■□□□□ 0.66
MKS1-209ENST00000580127 CFAP221Q4G0U5 840 aa19.2■□□□□ 0.66
MKS1-209ENST00000580127 SYT13Q7L8C5 426 aa19.2■□□□□ 0.66
MKS1-209ENST00000580127 KBTBD6Q86V97 674 aa19.2■□□□□ 0.66
MKS1-209ENST00000580127 SCN4BQ8IWT1 228 aa19.2■□□□□ 0.66
MKS1-209ENST00000580127 OSCP1Q8WVF1 389 aa19.2■□□□□ 0.66
MKS1-209ENST00000580127 CD101Q93033 1021 aa19.2■□□□□ 0.66
MKS1-209ENST00000580127 ANKRD36BP1Q96IX9 119 aa19.2■□□□□ 0.66
MKS1-209ENST00000580127 CEP295NLQ96MC4 621 aa19.2■□□□□ 0.66
MKS1-209ENST00000580127 STRA6Q9BX79 667 aa19.2■□□□□ 0.66
MKS1-209ENST00000580127 LRRC27Q9C0I9 530 aa19.2■□□□□ 0.66
MKS1-209ENST00000580127 OLFML3Q9NRN5 406 aa19.2■□□□□ 0.66
MKS1-209ENST00000580127 TMLHEQ9NVH6 421 aa19.2■□□□□ 0.66
MKS1-209ENST00000580127 TSC2P49815 1807 aa19.2■□□□□ 0.66
MKS1-209ENST00000580127 APBB3O95704 486 aa19.19■□□□□ 0.66
MKS1-209ENST00000580127 EGFP01133 1207 aa19.19■□□□□ 0.66
MKS1-209ENST00000580127 TNNC2P02585 160 aa19.19■□□□□ 0.66
MKS1-209ENST00000580127 ARSAP15289 507 aa19.19■□□□□ 0.66
MKS1-209ENST00000580127 HDCP19113 662 aa19.19■□□□□ 0.66
MKS1-209ENST00000580127 GJA4P35212 333 aa19.19■□□□□ 0.66
MKS1-209ENST00000580127 MAGEA11P43364 429 aa19.19■□□□□ 0.66
MKS1-209ENST00000580127 KCNB1Q14721 858 aa19.19■□□□□ 0.66
MKS1-209ENST00000580127 ST3GAL2Q16842 350 aa19.19■□□□□ 0.66
MKS1-209ENST00000580127 C11orf74Q86VG3 221 aa19.19■□□□□ 0.66
MKS1-209ENST00000580127 ADGRF2Q8IZF7 708 aa19.19■□□□□ 0.66
MKS1-209ENST00000580127 C1orf127Q8N9H9 656 aa19.19■□□□□ 0.66
MKS1-209ENST00000580127 SAAL1Q96ER3 474 aa19.19■□□□□ 0.66
MKS1-209ENST00000580127 MAGEC2Q9UBF1 373 aaPredicted RBP19.19■□□□□ 0.66
MKS1-209ENST00000580127 L1RE1Q9UN81 338 aa19.19■□□□□ 0.66
MKS1-209ENST00000580127 OTOL1A6NHN0 477 aaPredicted RBP19.18■□□□□ 0.66
MKS1-209ENST00000580127 MYMKA6NI61 221 aa19.18■□□□□ 0.66
MKS1-209ENST00000580127 PFKLP17858 780 aa19.18■□□□□ 0.66
MKS1-209ENST00000580127 ACAT1P24752 427 aaKnown RBP19.18■□□□□ 0.66
MKS1-209ENST00000580127 STAT6P42226 847 aa19.18■□□□□ 0.66
MKS1-209ENST00000580127 GPR15P49685 360 aa19.18■□□□□ 0.66
MKS1-209ENST00000580127 SF3A2Q15428 464 aaKnown RBP19.18■□□□□ 0.66
MKS1-209ENST00000580127 DUOXA2Q1HG44 320 aa19.18■□□□□ 0.66
MKS1-209ENST00000580127 STPG1Q5TH74 334 aa19.18■□□□□ 0.66
MKS1-209ENST00000580127 SDHAF4Q5VUM1 108 aa19.18■□□□□ 0.66
MKS1-209ENST00000580127 CCDC65Q8IXS2 484 aa19.18■□□□□ 0.66
MKS1-209ENST00000580127 CYP2S1Q96SQ9 504 aa19.18■□□□□ 0.66
MKS1-209ENST00000580127 KIAA1586Q9HCI6 787 aa19.18■□□□□ 0.66
MKS1-209ENST00000580127 PANK4Q9NVE7 773 aa19.18■□□□□ 0.66
MKS1-209ENST00000580127 EBF1Q9UH73 591 aa19.18■□□□□ 0.66
MKS1-209ENST00000580127 ANGPTL2Q9UKU9 493 aa19.18■□□□□ 0.66
MKS1-209ENST00000580127 CLIC4Q9Y696 253 aa19.18■□□□□ 0.66
MKS1-209ENST00000580127 ZNF233A6NK53 670 aa19.17■□□□□ 0.66
MKS1-209ENST00000580127 NFATC1O95644 943 aa19.17■□□□□ 0.66
MKS1-209ENST00000580127 ANXA13P27216 316 aa19.17■□□□□ 0.66
MKS1-209ENST00000580127 MPLP40238 635 aa19.17■□□□□ 0.66
MKS1-209ENST00000580127 PPP3CCP48454 512 aa19.17■□□□□ 0.66
MKS1-209ENST00000580127 KCNA1Q09470 495 aa19.17■□□□□ 0.66
MKS1-209ENST00000580127 USP39Q53GS9 565 aaKnown RBP19.17■□□□□ 0.66
MKS1-209ENST00000580127 PKN3Q6P5Z2 889 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms