RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 ERVK-21P61565 698 aa11.38□□□□□ -0.59
SS18-213ENST00000579640 NOMO3P69849 1222 aa11.38□□□□□ -0.59
SS18-213ENST00000579640 CENPCQ03188 943 aa11.38□□□□□ -0.59
SS18-213ENST00000579640 SLC8B1Q6J4K2 584 aa11.38□□□□□ -0.59
SS18-213ENST00000579640 TOGARAM2Q6ZUX3 1019 aa11.38□□□□□ -0.59
SS18-213ENST00000579640 FUKQ8N0W3 1084 aa11.38□□□□□ -0.59
SS18-213ENST00000579640 MSANTD4Q8NCY6 345 aa11.38□□□□□ -0.59
SS18-213ENST00000579640 SLC2A14Q8TDB8 520 aa11.38□□□□□ -0.59
SS18-213ENST00000579640 C2orf15Q8WU43 125 aaKnown RBP11.38□□□□□ -0.59
SS18-213ENST00000579640 MYLPFQ96A32 169 aa11.38□□□□□ -0.59
SS18-213ENST00000579640 PCED1BQ96HM7 432 aa11.38□□□□□ -0.59
SS18-213ENST00000579640 FUBP3Q96I24 572 aaKnown RBP eCLIP11.38□□□□□ -0.593e-6■□□□□ 10.3
SS18-213ENST00000579640 B3GALT6Q96L58 329 aa11.38□□□□□ -0.59
SS18-213ENST00000579640 NOX5Q96PH1 765 aa11.38□□□□□ -0.59
SS18-213ENST00000579640 MED10Q9BTT4 135 aa11.38□□□□□ -0.59
SS18-213ENST00000579640 PBX4Q9BYU1 374 aa11.38□□□□□ -0.59
SS18-213ENST00000579640 ZBP1Q9H171 429 aa11.38□□□□□ -0.59
SS18-213ENST00000579640 ISCUQ9H1K1 167 aa11.38□□□□□ -0.59
SS18-213ENST00000579640 MRPL17Q9NRX2 175 aaKnown RBP11.38□□□□□ -0.59
SS18-213ENST00000579640 GTF3C4Q9UKN8 822 aa11.38□□□□□ -0.59
SS18-213ENST00000579640 INTUQ9ULD6 942 aa11.38□□□□□ -0.59
SS18-213ENST00000579640 ZNF263O14978 683 aa11.37□□□□□ -0.59
SS18-213ENST00000579640 ZSCAN12O43309 604 aa11.37□□□□□ -0.59
SS18-213ENST00000579640 CCDC130P13994 396 aa11.37□□□□□ -0.59
SS18-213ENST00000579640 NSFP46459 744 aaKnown RBP11.37□□□□□ -0.59
SS18-213ENST00000579640 TAP1Q03518 808 aa11.37□□□□□ -0.59
SS18-213ENST00000579640 BST2Q10589 180 aaKnown RBP11.37□□□□□ -0.59
SS18-213ENST00000579640 GPR17Q13304 367 aa11.37□□□□□ -0.59
SS18-213ENST00000579640 PKDCCQ504Y2 493 aa11.37□□□□□ -0.59
SS18-213ENST00000579640 ACAD10Q6JQN1 1059 aa11.37□□□□□ -0.59
SS18-213ENST00000579640 DENND1BQ6P3S1 775 aa11.37□□□□□ -0.59
SS18-213ENST00000579640 PALB2Q86YC2 1186 aa11.37□□□□□ -0.59
SS18-213ENST00000579640 FBXO22Q8NEZ5 403 aa11.37□□□□□ -0.59
SS18-213ENST00000579640 TRIM11Q96F44 468 aa11.37□□□□□ -0.59
SS18-213ENST00000579640 SMARCD1Q96GM5 515 aa11.37□□□□□ -0.59
SS18-213ENST00000579640 C17orf80Q9BSJ5 609 aa11.37□□□□□ -0.59
SS18-213ENST00000579640 DUSP16Q9BY84 665 aa11.37□□□□□ -0.59
SS18-213ENST00000579640 B3GNT5Q9BYG0 378 aa11.37□□□□□ -0.59
SS18-213ENST00000579640 PRO3102Q9H379 93 aa11.37□□□□□ -0.59
SS18-213ENST00000579640 FNIP2Q9P278 1114 aa11.37□□□□□ -0.59
SS18-213ENST00000579640 PYCARDQ9ULZ3 195 aa11.37□□□□□ -0.59
SS18-213ENST00000579640 YBX2Q9Y2T7 364 aaKnown RBP11.37□□□□□ -0.59
SS18-213ENST00000579640 PCDHA13Q9Y5I0 950 aa11.37□□□□□ -0.59
SS18-213ENST00000579640 CFHP08603 1231 aa11.37□□□□□ -0.59
SS18-213ENST00000579640 H2AFZP0C0S5 128 aa11.37□□□□□ -0.59
SS18-213ENST00000579640 FAM200BP0CF97 657 aa11.37□□□□□ -0.59
SS18-213ENST00000579640 CPB1P15086 417 aa11.37□□□□□ -0.59
SS18-213ENST00000579640 ADORA2BP29275 332 aa11.37□□□□□ -0.59
SS18-213ENST00000579640 GPD2P43304 727 aa11.37□□□□□ -0.59
SS18-213ENST00000579640 VAV2P52735 878 aa11.37□□□□□ -0.59
SS18-213ENST00000579640 SNX16P57768 344 aa11.37□□□□□ -0.59
SS18-213ENST00000579640 CYP27A1Q02318 531 aa11.37□□□□□ -0.59
SS18-213ENST00000579640 CFAP221Q4G0U5 840 aa11.37□□□□□ -0.59
SS18-213ENST00000579640 SLC39A12Q504Y0 691 aa11.37□□□□□ -0.59
SS18-213ENST00000579640 NAA35Q5VZE5 725 aa11.37□□□□□ -0.59
SS18-213ENST00000579640 PRSS55Q6UWB4 352 aaPredicted RBP11.37□□□□□ -0.59
SS18-213ENST00000579640 H2AFVQ71UI9 128 aa11.37□□□□□ -0.59
SS18-213ENST00000579640 FAM35AQ86V20 835 aa11.37□□□□□ -0.59
SS18-213ENST00000579640 LRRTM3Q86VH5 581 aa11.37□□□□□ -0.59
SS18-213ENST00000579640 TTC30AQ86WT1 665 aa11.37□□□□□ -0.59
SS18-213ENST00000579640 PHF13Q86YI8 300 aaPredicted RBP11.37□□□□□ -0.59
SS18-213ENST00000579640 SPATA2LQ8IUW3 424 aaPredicted RBP11.37□□□□□ -0.59
SS18-213ENST00000579640 PASD1Q8IV76 773 aa11.37□□□□□ -0.59
SS18-213ENST00000579640 ACRBPQ8NEB7 543 aa11.37□□□□□ -0.59
SS18-213ENST00000579640 SPPL3Q8TCT6 385 aa11.37□□□□□ -0.59
SS18-213ENST00000579640 STK32AQ8WU08 396 aa11.37□□□□□ -0.59
SS18-213ENST00000579640 VCPIP1Q96JH7 1222 aa11.37□□□□□ -0.59
SS18-213ENST00000579640 TMEM209Q96SK2 561 aa11.37□□□□□ -0.59
SS18-213ENST00000579640 LPIN3Q9BQK8 851 aa11.37□□□□□ -0.59
SS18-213ENST00000579640 DESI2Q9BSY9 194 aa11.37□□□□□ -0.59
SS18-213ENST00000579640 MIS12Q9H081 205 aa11.37□□□□□ -0.59
SS18-213ENST00000579640 RXFP1Q9HBX9 757 aa11.37□□□□□ -0.59
SS18-213ENST00000579640 ABCB6Q9NP58 842 aa11.37□□□□□ -0.59
SS18-213ENST00000579640 CYLDQ9NQC7 956 aa11.37□□□□□ -0.59
SS18-213ENST00000579640 PPP2R2CQ9Y2T4 447 aa11.37□□□□□ -0.59
SS18-213ENST00000579640 IRAK3Q9Y616 596 aa11.37□□□□□ -0.59
SS18-213ENST00000579640 CDY1Q9Y6F8 540 aa11.37□□□□□ -0.59
SS18-213ENST00000579640 PLXNA4Q9HCM2 1894 aa11.36□□□□□ -0.59
SS18-213ENST00000579640 A0A1W2PPC1 479 aa11.36□□□□□ -0.59
SS18-213ENST00000579640 ANKRD62A6NC57 917 aa11.36□□□□□ -0.59
SS18-213ENST00000579640 LILRB3O75022 631 aa11.36□□□□□ -0.59
SS18-213ENST00000579640 ARHGEF15O94989 841 aa11.36□□□□□ -0.59
SS18-213ENST00000579640 FTLP02792 175 aaPredicted RBP11.36□□□□□ -0.59
SS18-213ENST00000579640 NPR3P17342 541 aa11.36□□□□□ -0.59
SS18-213ENST00000579640 SSTR3P32745 418 aaPredicted RBP11.36□□□□□ -0.59
SS18-213ENST00000579640 PBX2P40425 430 aa11.36□□□□□ -0.59
SS18-213ENST00000579640 SMAD3P84022 425 aaKnown RBP11.36□□□□□ -0.59
SS18-213ENST00000579640 C1QBPQ07021 282 aaKnown RBP11.36□□□□□ -0.59
SS18-213ENST00000579640 PTPN14Q15678 1187 aa11.36□□□□□ -0.59
SS18-213ENST00000579640 PDE12Q6L8Q7 609 aaKnown RBP11.36□□□□□ -0.59
SS18-213ENST00000579640 ZNF662Q6ZS27 426 aa11.36□□□□□ -0.59
SS18-213ENST00000579640 PAQR9Q6ZVX9 377 aa11.36□□□□□ -0.59
SS18-213ENST00000579640 TMC7Q7Z402 723 aa11.36□□□□□ -0.59
SS18-213ENST00000579640 KIAA1328Q86T90 577 aa11.36□□□□□ -0.59
SS18-213ENST00000579640 WDTC1Q8N5D0 677 aa11.36□□□□□ -0.59
SS18-213ENST00000579640 C1orf131Q8NDD1 294 aaKnown RBP11.36□□□□□ -0.59
SS18-213ENST00000579640 UBA3Q8TBC4 463 aa11.36□□□□□ -0.59
SS18-213ENST00000579640 KIAA1524Q8TCG1 905 aa11.36□□□□□ -0.59
SS18-213ENST00000579640 SPPL2BQ8TCT7 592 aa11.36□□□□□ -0.59
SS18-213ENST00000579640 POF1BQ8WVV4 589 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms