RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 GDF9O60383 454 aa9.59□□□□□ -0.87
GGA3-207ENST00000578896 LDHAP00338 332 aaKnown RBP9.59□□□□□ -0.87
GGA3-207ENST00000578896 EGFP01133 1207 aa9.59□□□□□ -0.87
GGA3-207ENST00000578896 TMEM191BP0C7N4 346 aa9.59□□□□□ -0.87
GGA3-207ENST00000578896 PNPLA4P41247 253 aa9.59□□□□□ -0.87
GGA3-207ENST00000578896 MLLT6P55198 1093 aaPredicted RBP9.59□□□□□ -0.87
GGA3-207ENST00000578896 RBP5P82980 135 aa9.59□□□□□ -0.87
GGA3-207ENST00000578896 MYL7Q01449 175 aa9.59□□□□□ -0.87
GGA3-207ENST00000578896 RUNX3Q13761 415 aa9.59□□□□□ -0.87
GGA3-207ENST00000578896 CCINQ13939 588 aa9.59□□□□□ -0.87
GGA3-207ENST00000578896 PPP2R5DQ14738 602 aa9.59□□□□□ -0.87
GGA3-207ENST00000578896 SOWAHAQ2M3V2 549 aa9.59□□□□□ -0.87
GGA3-207ENST00000578896 DGKKQ5KSL6 1271 aa9.59□□□□□ -0.87
GGA3-207ENST00000578896 MON1AQ86VX9 555 aa9.59□□□□□ -0.87
GGA3-207ENST00000578896 NT5DC4Q86YG4 428 aa9.59□□□□□ -0.87
GGA3-207ENST00000578896 CCDC65Q8IXS2 484 aa9.59□□□□□ -0.87
GGA3-207ENST00000578896 ADGRF2Q8IZF7 708 aa9.59□□□□□ -0.87
GGA3-207ENST00000578896 GPD1LQ8N335 351 aa9.59□□□□□ -0.87
GGA3-207ENST00000578896 C2orf15Q8WU43 125 aaKnown RBP9.59□□□□□ -0.87
GGA3-207ENST00000578896 MRPS31Q92665 395 aaKnown RBP9.59□□□□□ -0.87
GGA3-207ENST00000578896 SECISBP2LQ93073 1101 aaKnown RBP9.59□□□□□ -0.87
GGA3-207ENST00000578896 ELMO3Q96BJ8 720 aa9.59□□□□□ -0.87
GGA3-207ENST00000578896 DHX58Q96C10 678 aa9.59□□□□□ -0.87
GGA3-207ENST00000578896 ACBD6Q9BR61 282 aa9.59□□□□□ -0.87
GGA3-207ENST00000578896 OLFML3Q9NRN5 406 aa9.59□□□□□ -0.87
GGA3-207ENST00000578896 TDP1Q9NUW8 608 aa9.59□□□□□ -0.87
GGA3-207ENST00000578896 THG1LQ9NWX6 298 aaKnown RBP9.59□□□□□ -0.87
GGA3-207ENST00000578896 C2orf78A6NCI8 922 aa9.58□□□□□ -0.88
GGA3-207ENST00000578896 SCAMP3O14828 347 aaKnown RBP9.58□□□□□ -0.88
GGA3-207ENST00000578896 AXIN1O15169 862 aa9.58□□□□□ -0.88
GGA3-207ENST00000578896 CST3P01034 146 aaPredicted RBP9.58□□□□□ -0.88
GGA3-207ENST00000578896 CSH1P0DML2 217 aa9.58□□□□□ -0.88
GGA3-207ENST00000578896 CSH2P0DML3 217 aa9.58□□□□□ -0.88
GGA3-207ENST00000578896 WEE1P30291 646 aa9.58□□□□□ -0.88
GGA3-207ENST00000578896 NASPP49321 788 aaPredicted RBP9.58□□□□□ -0.88
GGA3-207ENST00000578896 GALK1P51570 392 aa9.58□□□□□ -0.88
GGA3-207ENST00000578896 ASIC1P78348 528 aa9.58□□□□□ -0.88
GGA3-207ENST00000578896 PLCB2Q00722 1185 aa9.58□□□□□ -0.88
GGA3-207ENST00000578896 POU5F1Q01860 360 aaKnown RBP9.58□□□□□ -0.88
GGA3-207ENST00000578896 SMARCB1Q12824 385 aa9.58□□□□□ -0.88
GGA3-207ENST00000578896 E2F4Q16254 413 aa9.58□□□□□ -0.88
GGA3-207ENST00000578896 NFE2Q16621 373 aaPredicted RBP9.58□□□□□ -0.88
GGA3-207ENST00000578896 LAIR1Q6GTX8 287 aa9.58□□□□□ -0.88
GGA3-207ENST00000578896 CEP68Q76N32 757 aa9.58□□□□□ -0.88
GGA3-207ENST00000578896 LONP2Q86WA8 852 aa9.58□□□□□ -0.88
GGA3-207ENST00000578896 SPATA2LQ8IUW3 424 aaPredicted RBP9.58□□□□□ -0.88
GGA3-207ENST00000578896 NELFCDQ8IXH7 590 aa9.58□□□□□ -0.88
GGA3-207ENST00000578896 LRRC52Q8N7C0 313 aa9.58□□□□□ -0.88
GGA3-207ENST00000578896 ARL14EPQ8N8R7 260 aaPredicted RBP9.58□□□□□ -0.88
GGA3-207ENST00000578896 LINC00301Q8NCQ3 95 aa9.58□□□□□ -0.88
GGA3-207ENST00000578896 KBTBD7Q8WVZ9 684 aa9.58□□□□□ -0.88
GGA3-207ENST00000578896 MYLPFQ96A32 169 aa9.58□□□□□ -0.88
GGA3-207ENST00000578896 MSANTD3Q96H12 275 aa9.58□□□□□ -0.88
GGA3-207ENST00000578896 HPDLQ96IR7 371 aa9.58□□□□□ -0.88
GGA3-207ENST00000578896 ANKRD36BP1Q96IX9 119 aa9.58□□□□□ -0.88
GGA3-207ENST00000578896 SYT15Q9BQS2 421 aa9.58□□□□□ -0.88
GGA3-207ENST00000578896 IER2Q9BTL4 223 aa9.58□□□□□ -0.88
GGA3-207ENST00000578896 BLZF1Q9H2G9 400 aa9.58□□□□□ -0.88
GGA3-207ENST00000578896 LINC00597Q9H2U6 94 aa9.58□□□□□ -0.88
GGA3-207ENST00000578896 TMEM206Q9H813 350 aa9.58□□□□□ -0.88
GGA3-207ENST00000578896 CRTAC1Q9NQ79 661 aa9.58□□□□□ -0.88
GGA3-207ENST00000578896 INTS13Q9NVM9 706 aa9.58□□□□□ -0.88
GGA3-207ENST00000578896 GDAP2Q9NXN4 497 aa9.58□□□□□ -0.88
GGA3-207ENST00000578896 HSPBP1Q9NZL4 362 aa9.58□□□□□ -0.88
GGA3-207ENST00000578896 ITGA11Q9UKX5 1188 aa9.58□□□□□ -0.88
GGA3-207ENST00000578896 CDV3Q9UKY7 258 aaKnown RBP9.58□□□□□ -0.88
GGA3-207ENST00000578896 NME7Q9Y5B8 376 aa9.58□□□□□ -0.88
GGA3-207ENST00000578896 WNT6Q9Y6F9 365 aa9.58□□□□□ -0.88
GGA3-207ENST00000578896 PTPRDP23468 1912 aa9.58□□□□□ -0.88
GGA3-207ENST00000578896 MYO16Q9Y6X6 1858 aa9.57□□□□□ -0.88
GGA3-207ENST00000578896 LAMA1P25391 3075 aa9.57□□□□□ -0.88
GGA3-207ENST00000578896 MYH10P35580 1976 aa9.57□□□□□ -0.88
GGA3-207ENST00000578896 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.57□□□□□ -0.88
GGA3-207ENST00000578896 ZNF233A6NK53 670 aa9.57□□□□□ -0.88
GGA3-207ENST00000578896 GABRDO14764 452 aa9.57□□□□□ -0.88
GGA3-207ENST00000578896 SPTLC2O15270 562 aa9.57□□□□□ -0.88
GGA3-207ENST00000578896 RNF40O75150 1001 aa9.57□□□□□ -0.88
GGA3-207ENST00000578896 NOL4O94818 638 aa9.57□□□□□ -0.88
GGA3-207ENST00000578896 TNNC2P02585 160 aa9.57□□□□□ -0.88
GGA3-207ENST00000578896 CKMP06732 381 aa9.57□□□□□ -0.88
GGA3-207ENST00000578896 RETP07949 1114 aa9.57□□□□□ -0.88
GGA3-207ENST00000578896 DLATP10515 647 aaKnown RBP9.57□□□□□ -0.88
GGA3-207ENST00000578896 BDNFP23560 247 aa9.57□□□□□ -0.88
GGA3-207ENST00000578896 LHX1P48742 406 aa9.57□□□□□ -0.88
GGA3-207ENST00000578896 CYP2J2P51589 502 aa9.57□□□□□ -0.88
GGA3-207ENST00000578896 USP46P62068 366 aa9.57□□□□□ -0.88
GGA3-207ENST00000578896 RPL10AP62906 217 aaKnown RBP9.57□□□□□ -0.88
GGA3-207ENST00000578896 CYP27A1Q02318 531 aa9.57□□□□□ -0.88
GGA3-207ENST00000578896 LMNB2Q03252 620 aa9.57□□□□□ -0.88
GGA3-207ENST00000578896 GRSF1Q12849 480 aaKnown RBP eCLIP9.57□□□□□ -0.88
GGA3-207ENST00000578896 MTF1Q14872 753 aa9.57□□□□□ -0.88
GGA3-207ENST00000578896 TMEM196Q5HYL7 178 aa9.57□□□□□ -0.88
GGA3-207ENST00000578896 CC2D1AQ6P1N0 951 aaPredicted RBP9.57□□□□□ -0.88
GGA3-207ENST00000578896 FAM171BQ6P995 826 aa9.57□□□□□ -0.88
GGA3-207ENST00000578896 SHC4Q6S5L8 630 aa9.57□□□□□ -0.88
GGA3-207ENST00000578896 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.57□□□□□ -0.88
GGA3-207ENST00000578896 GRAMD1CQ8IYS0 662 aa9.57□□□□□ -0.88
GGA3-207ENST00000578896 TMEM86AQ8N2M4 240 aa9.57□□□□□ -0.88
GGA3-207ENST00000578896 FAM160A2Q8N612 972 aaPredicted RBP9.57□□□□□ -0.88
GGA3-207ENST00000578896 TOP6BLQ8N6T0 577 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms