RNA–Protein interactions for RNA: ENST00000578415.1

TSEN54-205, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-205ENST00000578415 USP49Q70CQ1 688 aa22.57■■□□□ 1.2
TSEN54-205ENST00000578415 DYMQ7RTS9 669 aa22.57■■□□□ 1.2
TSEN54-205ENST00000578415 CXorf38Q8TB03 319 aa22.57■■□□□ 1.2
TSEN54-205ENST00000578415 TRMT2BQ96GJ1 504 aaKnown RBP22.57■■□□□ 1.2
TSEN54-205ENST00000578415 FAM84AQ96KN4 292 aa22.57■■□□□ 1.2
TSEN54-205ENST00000578415 MYRFLQ96LU7 910 aa22.57■■□□□ 1.2
TSEN54-205ENST00000578415 SLC22A12Q96S37 553 aa22.57■■□□□ 1.2
TSEN54-205ENST00000578415 ACBD6Q9BR61 282 aa22.57■■□□□ 1.2
TSEN54-205ENST00000578415 FAM213AQ9BRX8 229 aa22.57■■□□□ 1.2
TSEN54-205ENST00000578415 ECT2Q9H8V3 914 aa22.57■■□□□ 1.2
TSEN54-205ENST00000578415 DDX43Q9NXZ2 648 aaKnown RBP22.57■■□□□ 1.2
TSEN54-205ENST00000578415 ANGPTL2Q9UKU9 493 aa22.57■■□□□ 1.2
TSEN54-205ENST00000578415 AGAP1Q9UPQ3 857 aa22.57■■□□□ 1.2
TSEN54-205ENST00000578415 RPL10AP62906 217 aaKnown RBP22.56■■□□□ 1.2
TSEN54-205ENST00000578415 FAM160A1Q05DH4 1040 aa22.56■■□□□ 1.2
TSEN54-205ENST00000578415 FBXO43Q4G163 708 aa22.56■■□□□ 1.2
TSEN54-205ENST00000578415 OSTM1Q86WC4 334 aa22.56■■□□□ 1.2
TSEN54-205ENST00000578415 BRSK2Q8IWQ3 736 aa22.56■■□□□ 1.2
TSEN54-205ENST00000578415 RPLP0P6Q8NHW5 317 aa22.56■■□□□ 1.2
TSEN54-205ENST00000578415 OSCP1Q8WVF1 389 aa22.56■■□□□ 1.2
TSEN54-205ENST00000578415 SAAL1Q96ER3 474 aa22.56■■□□□ 1.2
TSEN54-205ENST00000578415 EPSTI1Q96J88 318 aa22.56■■□□□ 1.2
TSEN54-205ENST00000578415 CYP2S1Q96SQ9 504 aa22.56■■□□□ 1.2
TSEN54-205ENST00000578415 DUSP15Q9H1R2 295 aaPredicted RBP22.56■■□□□ 1.2
TSEN54-205ENST00000578415 UXTQ9UBK9 157 aaPredicted RBP22.56■■□□□ 1.2
TSEN54-205ENST00000578415 SPAG17Q6Q759 2223 aa22.55■■□□□ 1.2
TSEN54-205ENST00000578415 DENND4CQ5VZ89 1909 aa22.55■■□□□ 1.2
TSEN54-205ENST00000578415 USP4Q13107 963 aa22.55■■□□□ 1.2
TSEN54-205ENST00000578415 TCEAL6Q6IPX3 200 aa22.55■■□□□ 1.2
TSEN54-205ENST00000578415 SYT13Q7L8C5 426 aa22.55■■□□□ 1.2
TSEN54-205ENST00000578415 CPA6Q8N4T0 437 aa22.55■■□□□ 1.2
TSEN54-205ENST00000578415 TCEAL3Q969E4 200 aa22.55■■□□□ 1.2
TSEN54-205ENST00000578415 TRPC7Q9HCX4 862 aa22.55■■□□□ 1.2
TSEN54-205ENST00000578415 VPS45Q9NRW7 570 aa22.55■■□□□ 1.2
TSEN54-205ENST00000578415 DUS2Q9NX74 493 aaKnown RBP22.55■■□□□ 1.2
TSEN54-205ENST00000578415 GTF3C4Q9UKN8 822 aa22.55■■□□□ 1.2
TSEN54-205ENST00000578415 SMC3Q9UQE7 1217 aa22.55■■□□□ 1.2
TSEN54-205ENST00000578415 WNT6Q9Y6F9 365 aa22.55■■□□□ 1.2
TSEN54-205ENST00000578415 OBSL1O75147 1896 aa22.55■■□□□ 1.2
TSEN54-205ENST00000578415 DCLK1O15075 740 aa22.54■■□□□ 1.2
TSEN54-205ENST00000578415 HCRTO43612 131 aa22.54■■□□□ 1.2
TSEN54-205ENST00000578415 HUS1O60921 280 aa22.54■■□□□ 1.2
TSEN54-205ENST00000578415 SHC2P98077 582 aa22.54■■□□□ 1.2
TSEN54-205ENST00000578415 EML3Q32P44 896 aa22.54■■□□□ 1.2
TSEN54-205ENST00000578415 L1TD1Q5T7N2 865 aaKnown RBP22.54■■□□□ 1.2
TSEN54-205ENST00000578415 LARP1BQ659C4 914 aaKnown RBP22.54■■□□□ 1.2
TSEN54-205ENST00000578415 BRAPQ7Z569 592 aa22.54■■□□□ 1.2
TSEN54-205ENST00000578415 TMEM86AQ8N2M4 240 aa22.54■■□□□ 1.2
TSEN54-205ENST00000578415 LRRC52Q8N7C0 313 aa22.54■■□□□ 1.2
TSEN54-205ENST00000578415 CD101Q93033 1021 aa22.54■■□□□ 1.2
TSEN54-205ENST00000578415 DNAJC19Q96DA6 116 aa22.54■■□□□ 1.2
TSEN54-205ENST00000578415 TMEM206Q9H813 350 aa22.54■■□□□ 1.2
TSEN54-205ENST00000578415 MRPL44Q9H9J2 332 aaKnown RBP22.54■■□□□ 1.2
TSEN54-205ENST00000578415 GDAP2Q9NXN4 497 aa22.54■■□□□ 1.2
TSEN54-205ENST00000578415 TBC1D7Q9P0N9 293 aa22.54■■□□□ 1.2
TSEN54-205ENST00000578415 SEL1LQ9UBV2 794 aa22.54■■□□□ 1.2
TSEN54-205ENST00000578415 TCHHQ07283 1943 aa22.53■■□□□ 1.2
TSEN54-205ENST00000578415 ATG2BQ96BY7 2078 aa22.53■■□□□ 1.2
TSEN54-205ENST00000578415 MYMKA6NI61 221 aa22.53■■□□□ 1.2
TSEN54-205ENST00000578415 CKMP06732 381 aa22.53■■□□□ 1.2
TSEN54-205ENST00000578415 USP17L7P0C7H9 530 aa22.53■■□□□ 1.2
TSEN54-205ENST00000578415 MYL7Q01449 175 aa22.53■■□□□ 1.2
TSEN54-205ENST00000578415 DMC1Q14565 340 aa22.53■■□□□ 1.2
TSEN54-205ENST00000578415 CFAP221Q4G0U5 840 aa22.53■■□□□ 1.2
TSEN54-205ENST00000578415 TTC16Q8NEE8 873 aa22.53■■□□□ 1.2
TSEN54-205ENST00000578415 ATP2A3Q93084 1043 aa22.53■■□□□ 1.2
TSEN54-205ENST00000578415 ACCSQ96QU6 501 aa22.53■■□□□ 1.2
TSEN54-205ENST00000578415 LSM14BQ9BX40 385 aaKnown RBP22.53■■□□□ 1.2
TSEN54-205ENST00000578415 RBAKQ9NYW8 714 aaPredicted RBP22.53■■□□□ 1.2
TSEN54-205ENST00000578415 GCNT4Q9P109 453 aa22.53■■□□□ 1.2
TSEN54-205ENST00000578415 STK17AQ9UEE5 414 aa22.53■■□□□ 1.2
TSEN54-205ENST00000578415 EBF1Q9UH73 591 aa22.53■■□□□ 1.2
TSEN54-205ENST00000578415 SIX4Q9UIU6 781 aa22.53■■□□□ 1.2
TSEN54-205ENST00000578415 EXOC7Q9UPT5 735 aa22.53■■□□□ 1.2
TSEN54-205ENST00000578415 EML5Q05BV3 1969 aa22.52■■□□□ 1.2
TSEN54-205ENST00000578415 TRAV19A0A0A6YYK7 116 aa22.52■■□□□ 1.2
TSEN54-205ENST00000578415 TULP1O00294 542 aaPredicted RBP22.52■■□□□ 1.2
TSEN54-205ENST00000578415 GABRDO14764 452 aa22.52■■□□□ 1.2
TSEN54-205ENST00000578415 KCNK5O95279 499 aa22.52■■□□□ 1.2
TSEN54-205ENST00000578415 APBB3O95704 486 aa22.52■■□□□ 1.2
TSEN54-205ENST00000578415 IFNAR2P48551 515 aa22.52■■□□□ 1.2
TSEN54-205ENST00000578415 CASP5P51878 434 aa22.52■■□□□ 1.2
TSEN54-205ENST00000578415 ADGRF2Q8IZF7 708 aa22.52■■□□□ 1.2
TSEN54-205ENST00000578415 CSGALNACT2Q8N6G5 542 aa22.52■■□□□ 1.2
TSEN54-205ENST00000578415 ARL14EPQ8N8R7 260 aaPredicted RBP22.52■■□□□ 1.2
TSEN54-205ENST00000578415 EXOC4Q96A65 974 aa22.52■■□□□ 1.2
TSEN54-205ENST00000578415 ITGA11Q9UKX5 1188 aa22.52■■□□□ 1.2
TSEN54-205ENST00000578415 SNX9Q9Y5X1 595 aa22.52■■□□□ 1.2
TSEN54-205ENST00000578415 CFAP47Q6ZTR5 3102 aa22.51■■□□□ 1.19
TSEN54-205ENST00000578415 GOLGA8IPA6NC78 632 aa22.51■■□□□ 1.19
TSEN54-205ENST00000578415 C2orf78A6NCI8 922 aa22.51■■□□□ 1.19
TSEN54-205ENST00000578415 GOLGA8JA6NMD2 632 aa22.51■■□□□ 1.19
TSEN54-205ENST00000578415 GCNT3O95395 438 aa22.51■■□□□ 1.19
TSEN54-205ENST00000578415 GAP43P17677 238 aa22.51■■□□□ 1.19
TSEN54-205ENST00000578415 ELF2Q15723 593 aa22.51■■□□□ 1.19
TSEN54-205ENST00000578415 SOWAHAQ2M3V2 549 aa22.51■■□□□ 1.19
TSEN54-205ENST00000578415 RNF43Q68DV7 783 aa22.51■■□□□ 1.19
TSEN54-205ENST00000578415 SPATA2LQ8IUW3 424 aaPredicted RBP22.51■■□□□ 1.19
TSEN54-205ENST00000578415 SCN4BQ8IWT1 228 aa22.51■■□□□ 1.19
TSEN54-205ENST00000578415 TOP6BLQ8N6T0 577 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms