RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 ALDH7A1P49419 539 aaKnown RBP8.55□□□□□ -1.04
COPS3-215ENST00000578317 SMCPP49901 116 aaPredicted RBP8.55□□□□□ -1.04
COPS3-215ENST00000578317 GATMP50440 423 aa8.55□□□□□ -1.04
COPS3-215ENST00000578317 BPIFB4P59827 614 aa8.55□□□□□ -1.04
COPS3-215ENST00000578317 YWHAEP62258 255 aaKnown RBP8.55□□□□□ -1.04
COPS3-215ENST00000578317 INCA1Q0VD86 236 aa8.55□□□□□ -1.04
COPS3-215ENST00000578317 MEA1Q16626 185 aa8.55□□□□□ -1.04
COPS3-215ENST00000578317 PKDCCQ504Y2 493 aa8.55□□□□□ -1.04
COPS3-215ENST00000578317 PDXDC1Q6P996 788 aa8.55□□□□□ -1.04
COPS3-215ENST00000578317 GJB7Q6PEY0 223 aa8.55□□□□□ -1.04
COPS3-215ENST00000578317 IRF2BP2Q7Z5L9 587 aa8.55□□□□□ -1.04
COPS3-215ENST00000578317 ATCAYQ86WG3 371 aa8.55□□□□□ -1.04
COPS3-215ENST00000578317 HERC6Q8IVU3 1022 aa8.55□□□□□ -1.04
COPS3-215ENST00000578317 ZNF295-AS1Q8N0V1 137 aa8.55□□□□□ -1.04
COPS3-215ENST00000578317 TOP6BLQ8N6T0 577 aa8.55□□□□□ -1.04
COPS3-215ENST00000578317 UBR7Q8N806 425 aa8.55□□□□□ -1.04
COPS3-215ENST00000578317 CPLX3Q8WVH0 158 aa8.55□□□□□ -1.04
COPS3-215ENST00000578317 SPAG5Q96R06 1193 aa8.55□□□□□ -1.04
COPS3-215ENST00000578317 PAAF1Q9BRP4 392 aa8.55□□□□□ -1.04
COPS3-215ENST00000578317 CWH43Q9H720 699 aa8.55□□□□□ -1.04
COPS3-215ENST00000578317 NLRC4Q9NPP4 1024 aa8.55□□□□□ -1.04
COPS3-215ENST00000578317 ABHD10Q9NUJ1 306 aa8.55□□□□□ -1.04
COPS3-215ENST00000578317 FAN1Q9Y2M0 1017 aa8.55□□□□□ -1.04
COPS3-215ENST00000578317 HCN4Q9Y3Q4 1203 aa8.55□□□□□ -1.04
COPS3-215ENST00000578317 SNX9Q9Y5X1 595 aa8.55□□□□□ -1.04
COPS3-215ENST00000578317 BZW2Q9Y6E2 419 aaKnown RBP8.55□□□□□ -1.04
COPS3-215ENST00000578317 MEN1O00255 615 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 GABRDO14764 452 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 B4GALT3O60512 393 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 HUS1O60921 280 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 FERP16591 822 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 ATP2A2P16615 1042 aaKnown RBP8.54□□□□□ -1.04
COPS3-215ENST00000578317 IBSPP21815 317 aaPredicted RBP8.54□□□□□ -1.04
COPS3-215ENST00000578317 MZF1P28698 734 aaPredicted RBP8.54□□□□□ -1.04
COPS3-215ENST00000578317 OR1G1P47890 313 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 ZNF132P52740 706 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 ADKP55263 362 aaKnown RBP8.54□□□□□ -1.04
COPS3-215ENST00000578317 TNNC1P63316 161 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 BTG3Q14201 252 aaPredicted RBP8.54□□□□□ -1.04
COPS3-215ENST00000578317 SOWAHAQ2M3V2 549 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 TIGD5Q53EQ6 642 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 WDR59Q6PJI9 974 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 UNC93AQ86WB7 457 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 LRRC8AQ8IWT6 810 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 LINC00528Q8N1L1 170 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 TMEM86AQ8N2M4 240 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 TMEM130Q8N3G9 435 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 C3orf58Q8NDZ4 430 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 KAT5Q92993 513 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 SUSD3Q96L08 255 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 SENP8Q96LD8 212 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 YME1L1Q96TA2 773 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 CISHQ9NSE2 258 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 ZNHIT6Q9NWK9 470 aaKnown RBP8.54□□□□□ -1.04
COPS3-215ENST00000578317 NXF1Q9UBU9 619 aaKnown RBP8.54□□□□□ -1.04
COPS3-215ENST00000578317 DNAJB4Q9UDY4 337 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 STK39Q9UEW8 545 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 AJAP1Q9UKB5 411 aaPredicted RBP8.54□□□□□ -1.04
COPS3-215ENST00000578317 DSEQ9UL01 958 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 KIAA1257Q9ULG3 409 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 BARX2Q9UMQ3 279 aaPredicted RBP8.54□□□□□ -1.04
COPS3-215ENST00000578317 POLIQ9UNA4 740 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 TANC1Q9C0D5 1861 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 LTBP2Q14767 1821 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 LRRC53A6NM62 1247 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 CYB561D2O14569 222 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 SYN3O14994 580 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 CILPO75339 1184 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 TADA2AO75478 443 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 WEE2P0C1S8 567 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 BMP1P13497 986 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 LAG3P18627 525 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 TYMPP19971 482 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 WARSP23381 471 aaKnown RBP8.54□□□□□ -1.04
COPS3-215ENST00000578317 IGFBP6P24592 240 aaPredicted RBP8.54□□□□□ -1.04
COPS3-215ENST00000578317 ANXA13P27216 316 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 LHX1P48742 406 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 SLC11A1P49279 550 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 BCAR1P56945 870 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 ELAVL2Q12926 359 aaKnown RBP8.54□□□□□ -1.04
COPS3-215ENST00000578317 RAPGEF1Q13905 1077 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 SHHQ15465 462 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 ARHGAP44Q17R89 818 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 HS1BP3Q53T59 392 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 SFMBT2Q5VUG0 894 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 KCNT2Q6UVM3 1135 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 TRIM46Q7Z4K8 759 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 ETFBKMTQ8IXQ9 262 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 GPR65Q8IYL9 337 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 GJD3Q8N144 294 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 CRYBG2Q8N1P7 616 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 APPL2Q8NEU8 664 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 MMS19Q96T76 1030 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 PHACTR1Q9C0D0 580 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 AAASQ9NRG9 546 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 ADAM28Q9UKQ2 775 aa8.54□□□□□ -1.04
COPS3-215ENST00000578317 SSU72P8A0A1W2PR75 194 aa8.53□□□□□ -1.04
COPS3-215ENST00000578317 OAZ2O95190 189 aa8.53□□□□□ -1.04
COPS3-215ENST00000578317 KIF4AO95239 1232 aa8.53□□□□□ -1.04
COPS3-215ENST00000578317 SERPING1P05155 500 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms