RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 GDI1P31150 447 aa24.56■■□□□ 1.52
VAPA-205ENST00000578314 TNNC1P63316 161 aa24.56■■□□□ 1.52
VAPA-205ENST00000578314 GCNAQ96QF7 691 aa24.56■■□□□ 1.52
VAPA-205ENST00000578314 SNX25Q9H3E2 840 aa24.56■■□□□ 1.52
VAPA-205ENST00000578314 HEBP1Q9NRV9 189 aa24.56■■□□□ 1.52
VAPA-205ENST00000578314 MAPK8IP1Q9UQF2 711 aa24.56■■□□□ 1.52
VAPA-205ENST00000578314 DMDP11532 3685 aa24.55■■□□□ 1.52
VAPA-205ENST00000578314 SOBPA7XYQ1 873 aa24.55■■□□□ 1.52
VAPA-205ENST00000578314 IKBKBO14920 756 aa24.55■■□□□ 1.52
VAPA-205ENST00000578314 NOL4O94818 638 aa24.55■■□□□ 1.52
VAPA-205ENST00000578314 NBL1P41271 181 aa24.55■■□□□ 1.52
VAPA-205ENST00000578314 NLRP12P59046 1061 aa24.55■■□□□ 1.52
VAPA-205ENST00000578314 PSMC1P62191 440 aaKnown RBP24.55■■□□□ 1.52
VAPA-205ENST00000578314 DLG4P78352 724 aa24.55■■□□□ 1.52
VAPA-205ENST00000578314 CYP4F8P98187 520 aa24.55■■□□□ 1.52
VAPA-205ENST00000578314 FCHO2Q0JRZ9 810 aa24.55■■□□□ 1.52
VAPA-205ENST00000578314 BIRC3Q13489 604 aa24.55■■□□□ 1.52
VAPA-205ENST00000578314 SDHAF4Q5VUM1 108 aa24.55■■□□□ 1.52
VAPA-205ENST00000578314 MYCBPAPQ8TBZ2 947 aa24.55■■□□□ 1.52
VAPA-205ENST00000578314 TRMT2BQ96GJ1 504 aaKnown RBP24.55■■□□□ 1.52
VAPA-205ENST00000578314 MYRFLQ96LU7 910 aa24.55■■□□□ 1.52
VAPA-205ENST00000578314 NELL2Q99435 816 aa24.55■■□□□ 1.52
VAPA-205ENST00000578314 SLC46A2Q9BY10 475 aa24.55■■□□□ 1.52
VAPA-205ENST00000578314 MAGEC2Q9UBF1 373 aaPredicted RBP24.55■■□□□ 1.52
VAPA-205ENST00000578314 NME7Q9Y5B8 376 aa24.55■■□□□ 1.52
VAPA-205ENST00000578314 SHISA7A6NL88 538 aa24.54■■□□□ 1.52
VAPA-205ENST00000578314 ARNTLO00327 626 aa24.54■■□□□ 1.52
VAPA-205ENST00000578314 ZNF263O14978 683 aa24.54■■□□□ 1.52
VAPA-205ENST00000578314 VNN1O95497 513 aa24.54■■□□□ 1.52
VAPA-205ENST00000578314 GLULP15104 373 aa24.54■■□□□ 1.52
VAPA-205ENST00000578314 NCOA4Q13772 614 aa24.54■■□□□ 1.52
VAPA-205ENST00000578314 ZACNQ401N2 412 aa24.54■■□□□ 1.52
VAPA-205ENST00000578314 CEP135Q66GS9 1140 aa24.54■■□□□ 1.52
VAPA-205ENST00000578314 VSTM1Q6UX27 236 aa24.54■■□□□ 1.52
VAPA-205ENST00000578314 ZNF852Q6ZMS4 543 aa24.54■■□□□ 1.52
VAPA-205ENST00000578314 TPRG1Q6ZUI0 275 aa24.54■■□□□ 1.52
VAPA-205ENST00000578314 OR6B3Q8NGW1 331 aa24.54■■□□□ 1.52
VAPA-205ENST00000578314 LRRC3BQ96PB8 259 aa24.54■■□□□ 1.52
VAPA-205ENST00000578314 LTB4R2Q9NPC1 389 aa24.54■■□□□ 1.52
VAPA-205ENST00000578314 NXF1Q9UBU9 619 aaKnown RBP24.54■■□□□ 1.52
VAPA-205ENST00000578314 MTF2Q9Y483 593 aaPredicted RBP24.54■■□□□ 1.52
VAPA-205ENST00000578314 VPS13AQ96RL7 3174 aa24.54■■□□□ 1.52
VAPA-205ENST00000578314 FAM170BA6NMN3 283 aa24.53■■□□□ 1.52
VAPA-205ENST00000578314 SLC38A8A6NNN8 435 aa24.53■■□□□ 1.52
VAPA-205ENST00000578314 CHADO15335 359 aa24.53■■□□□ 1.52
VAPA-205ENST00000578314 CD72P21854 359 aa24.53■■□□□ 1.52
VAPA-205ENST00000578314 NR2F2P24468 414 aa24.53■■□□□ 1.52
VAPA-205ENST00000578314 DDX6P26196 483 aaKnown RBP eCLIP24.53■■□□□ 1.52
VAPA-205ENST00000578314 RPL13P26373 211 aaKnown RBP24.53■■□□□ 1.52
VAPA-205ENST00000578314 FAM160A1Q05DH4 1040 aa24.53■■□□□ 1.52
VAPA-205ENST00000578314 PNOCQ13519 176 aa24.53■■□□□ 1.52
VAPA-205ENST00000578314 ANGPT1Q15389 498 aa24.53■■□□□ 1.52
VAPA-205ENST00000578314 ZCWPW2Q504Y3 356 aa24.53■■□□□ 1.52
VAPA-205ENST00000578314 C1orf220Q5T0J3 134 aa24.53■■□□□ 1.52
VAPA-205ENST00000578314 GPIHBP1Q8IV16 184 aa24.53■■□□□ 1.52
VAPA-205ENST00000578314 MYLPFQ96A32 169 aa24.53■■□□□ 1.52
VAPA-205ENST00000578314 CEP295NLQ96MC4 621 aa24.53■■□□□ 1.52
VAPA-205ENST00000578314 UXTQ9UBK9 157 aaPredicted RBP24.53■■□□□ 1.52
VAPA-205ENST00000578314 MAGED2Q9UNF1 606 aaPredicted RBP24.53■■□□□ 1.52
VAPA-205ENST00000578314 DPYSL4O14531 572 aa24.52■■□□□ 1.52
VAPA-205ENST00000578314 LRRN2O75325 713 aa24.52■■□□□ 1.52
VAPA-205ENST00000578314 AKAP3O75969 853 aa24.52■■□□□ 1.52
VAPA-205ENST00000578314 PRAMEF12O95522 483 aa24.52■■□□□ 1.52
VAPA-205ENST00000578314 PTPN1P18031 435 aaKnown RBP24.52■■□□□ 1.52
VAPA-205ENST00000578314 MLLT6P55198 1093 aaPredicted RBP24.52■■□□□ 1.52
VAPA-205ENST00000578314 MCCD1P59942 119 aaPredicted RBP24.52■■□□□ 1.52
VAPA-205ENST00000578314 ENPEPQ07075 957 aa24.52■■□□□ 1.52
VAPA-205ENST00000578314 UBXN2BQ14CS0 331 aa24.52■■□□□ 1.52
VAPA-205ENST00000578314 ZNF699Q32M78 642 aa24.52■■□□□ 1.52
VAPA-205ENST00000578314 SV2AQ7L0J3 742 aa24.52■■□□□ 1.52
VAPA-205ENST00000578314 SCN4BQ8IWT1 228 aa24.52■■□□□ 1.52
VAPA-205ENST00000578314 YAF2Q8IY57 180 aa24.52■■□□□ 1.52
VAPA-205ENST00000578314 CMTM8Q8IZV2 173 aa24.52■■□□□ 1.52
VAPA-205ENST00000578314 STKLD1Q8NE28 680 aa24.52■■□□□ 1.52
VAPA-205ENST00000578314 SPATA20Q8TB22 786 aa24.52■■□□□ 1.52
VAPA-205ENST00000578314 PCED1BQ96HM7 432 aa24.52■■□□□ 1.52
VAPA-205ENST00000578314 SPATA17Q96L03 361 aa24.52■■□□□ 1.52
VAPA-205ENST00000578314 TIGD1Q96MW7 591 aa24.52■■□□□ 1.52
VAPA-205ENST00000578314 MAN2B1O00754 1011 aa24.51■■□□□ 1.51
VAPA-205ENST00000578314 BDNFP23560 247 aa24.51■■□□□ 1.51
VAPA-205ENST00000578314 VAMP7P51809 220 aa24.51■■□□□ 1.51
VAPA-205ENST00000578314 CYP27A1Q02318 531 aa24.51■■□□□ 1.51
VAPA-205ENST00000578314 ADAM9Q13443 819 aa24.51■■□□□ 1.51
VAPA-205ENST00000578314 SGSM1Q2NKQ1 1148 aa24.51■■□□□ 1.51
VAPA-205ENST00000578314 ZNF667Q5HYK9 610 aa24.51■■□□□ 1.51
VAPA-205ENST00000578314 INTS8Q75QN2 995 aaKnown RBP24.51■■□□□ 1.51
VAPA-205ENST00000578314 MON1AQ86VX9 555 aa24.51■■□□□ 1.51
VAPA-205ENST00000578314 TAF4BQ92750 862 aa24.51■■□□□ 1.51
VAPA-205ENST00000578314 CLDN23Q96B33 292 aa24.51■■□□□ 1.51
VAPA-205ENST00000578314 GSDMAQ96QA5 445 aa24.51■■□□□ 1.51
VAPA-205ENST00000578314 RMND1Q9NWS8 449 aa24.51■■□□□ 1.51
VAPA-205ENST00000578314 MRPS17Q9Y2R5 130 aaKnown RBP24.51■■□□□ 1.51
VAPA-205ENST00000578314 A8MXQ7 604 aa24.5■■□□□ 1.51
VAPA-205ENST00000578314 PSMC2P35998 433 aaKnown RBP24.5■■□□□ 1.51
VAPA-205ENST00000578314 MAGEA9P43362 315 aa24.5■■□□□ 1.51
VAPA-205ENST00000578314 EDRF1Q3B7T1 1238 aa24.5■■□□□ 1.51
VAPA-205ENST00000578314 ARHGAP29Q52LW3 1261 aa24.5■■□□□ 1.51
VAPA-205ENST00000578314 COBLL1Q53SF7 1204 aa24.5■■□□□ 1.51
VAPA-205ENST00000578314 MDH1BQ5I0G3 518 aa24.5■■□□□ 1.51
VAPA-205ENST00000578314 ZNF687Q8N1G0 1237 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms