RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 C18orf8Q96DM3 657 aa19.62■□□□□ 0.73
PRKCA-203ENST00000578063 CPXM1Q96SM3 734 aa19.62■□□□□ 0.73
PRKCA-203ENST00000578063 TMEM175Q9BSA9 504 aa19.62■□□□□ 0.73
PRKCA-203ENST00000578063 DNAJB4Q9UDY4 337 aa19.62■□□□□ 0.73
PRKCA-203ENST00000578063 LCMT1Q9UIC8 334 aa19.62■□□□□ 0.73
PRKCA-203ENST00000578063 SLU7O95391 586 aaKnown RBP19.62■□□□□ 0.73
PRKCA-203ENST00000578063 CSF2RAP15509 400 aa19.62■□□□□ 0.73
PRKCA-203ENST00000578063 ACAT1P24752 427 aaKnown RBP19.62■□□□□ 0.73
PRKCA-203ENST00000578063 SNX16P57768 344 aa19.62■□□□□ 0.73
PRKCA-203ENST00000578063 BST2Q10589 180 aaKnown RBP19.62■□□□□ 0.73
PRKCA-203ENST00000578063 SLC2A14Q8TDB8 520 aa19.62■□□□□ 0.73
PRKCA-203ENST00000578063 STK32AQ8WU08 396 aa19.62■□□□□ 0.73
PRKCA-203ENST00000578063 OSBPL9Q96SU4 736 aa19.62■□□□□ 0.73
PRKCA-203ENST00000578063 HNRNPABQ99729 332 aaKnown RBP19.62■□□□□ 0.73
PRKCA-203ENST00000578063 PRG3Q9Y2Y8 225 aaPredicted RBP19.62■□□□□ 0.73
PRKCA-203ENST00000578063 TCRBV5S1A1TA0A578 114 aa19.61■□□□□ 0.73
PRKCA-203ENST00000578063 AMHP03971 560 aa19.61■□□□□ 0.73
PRKCA-203ENST00000578063 ADORA2BP29275 332 aa19.61■□□□□ 0.73
PRKCA-203ENST00000578063 MESDQ14696 234 aa19.61■□□□□ 0.73
PRKCA-203ENST00000578063 LLGL2Q6P1M3 1020 aa19.61■□□□□ 0.73
PRKCA-203ENST00000578063 FEZF2Q8TBJ5 459 aa19.61■□□□□ 0.73
PRKCA-203ENST00000578063 ACBD6Q9BR61 282 aa19.61■□□□□ 0.73
PRKCA-203ENST00000578063 COLEC11Q9BWP8 271 aa19.61■□□□□ 0.73
PRKCA-203ENST00000578063 ALG6Q9Y672 507 aa19.61■□□□□ 0.73
PRKCA-203ENST00000578063 TSC2P49815 1807 aa19.61■□□□□ 0.73
PRKCA-203ENST00000578063 F8W810 466 aa19.6■□□□□ 0.73
PRKCA-203ENST00000578063 MYO1FO00160 1098 aa19.6■□□□□ 0.73
PRKCA-203ENST00000578063 TADA2AO75478 443 aa19.6■□□□□ 0.73
PRKCA-203ENST00000578063 ERBB2P04626 1255 aa19.6■□□□□ 0.73
PRKCA-203ENST00000578063 SLC8A3P57103 927 aa19.6■□□□□ 0.73
PRKCA-203ENST00000578063 ZNF268Q14587 947 aaPredicted RBP19.6■□□□□ 0.73
PRKCA-203ENST00000578063 LTBP2Q14767 1821 aa19.6■□□□□ 0.73
PRKCA-203ENST00000578063 MDH1BQ5I0G3 518 aa19.6■□□□□ 0.73
PRKCA-203ENST00000578063 CYP4A22Q5TCH4 519 aa19.6■□□□□ 0.73
PRKCA-203ENST00000578063 OVOS1Q6IE37 1185 aa19.6■□□□□ 0.73
PRKCA-203ENST00000578063 PHLDB2Q86SQ0 1253 aa19.6■□□□□ 0.73
PRKCA-203ENST00000578063 THEM5Q8N1Q8 247 aa19.6■□□□□ 0.73
PRKCA-203ENST00000578063 CEP112Q8N8E3 955 aa19.6■□□□□ 0.73
PRKCA-203ENST00000578063 SLC35F5Q8WV83 523 aa19.6■□□□□ 0.73
PRKCA-203ENST00000578063 HES6Q96HZ4 224 aa19.6■□□□□ 0.73
PRKCA-203ENST00000578063 LPIN3Q9BQK8 851 aa19.6■□□□□ 0.73
PRKCA-203ENST00000578063 CRTAC1Q9NQ79 661 aa19.6■□□□□ 0.73
PRKCA-203ENST00000578063 CYLDQ9NQC7 956 aa19.6■□□□□ 0.73
PRKCA-203ENST00000578063 ST7Q9NRC1 585 aa19.6■□□□□ 0.73
PRKCA-203ENST00000578063 PACSIN2Q9UNF0 486 aaPredicted RBP19.6■□□□□ 0.73
PRKCA-203ENST00000578063 MYH10P35580 1976 aa19.6■□□□□ 0.73
PRKCA-203ENST00000578063 TMEM110-MUSTN1A8MSY1 372 aa19.59■□□□□ 0.73
PRKCA-203ENST00000578063 MIF4GDA9UHW6 222 aaKnown RBP19.59■□□□□ 0.73
PRKCA-203ENST00000578063 NRP1O14786 923 aa19.59■□□□□ 0.73
PRKCA-203ENST00000578063 SYN3O14994 580 aa19.59■□□□□ 0.73
PRKCA-203ENST00000578063 ATP2C2O75185 946 aa19.59■□□□□ 0.73
PRKCA-203ENST00000578063 BAIAP3O94812 1187 aa19.59■□□□□ 0.73
PRKCA-203ENST00000578063 ALDH2P05091 517 aa19.59■□□□□ 0.73
PRKCA-203ENST00000578063 PLCB3Q01970 1234 aa19.59■□□□□ 0.73
PRKCA-203ENST00000578063 PDE4CQ08493 712 aa19.59■□□□□ 0.73
PRKCA-203ENST00000578063 KIAA0319Q5VV43 1072 aa19.59■□□□□ 0.73
PRKCA-203ENST00000578063 XYLT1Q86Y38 959 aa19.59■□□□□ 0.73
PRKCA-203ENST00000578063 FUKQ8N0W3 1084 aa19.59■□□□□ 0.73
PRKCA-203ENST00000578063 MNS1Q8NEH6 495 aa19.59■□□□□ 0.73
PRKCA-203ENST00000578063 MYCBPAPQ8TBZ2 947 aa19.59■□□□□ 0.73
PRKCA-203ENST00000578063 SELENOOQ9BVL4 669 aa19.59■□□□□ 0.73
PRKCA-203ENST00000578063 SLC4A5Q9BY07 1137 aa19.59■□□□□ 0.73
PRKCA-203ENST00000578063 PRKAG2Q9UGJ0 569 aa19.59■□□□□ 0.73
PRKCA-203ENST00000578063 ADAM28Q9UKQ2 775 aa19.59■□□□□ 0.73
PRKCA-203ENST00000578063 CES2O00748 559 aa19.59■□□□□ 0.73
PRKCA-203ENST00000578063 SRGAP2O75044 1071 aa19.59■□□□□ 0.73
PRKCA-203ENST00000578063 DGKIO75912 1065 aa19.59■□□□□ 0.73
PRKCA-203ENST00000578063 COMTP21964 271 aa19.59■□□□□ 0.73
PRKCA-203ENST00000578063 TKTP29401 623 aaKnown RBP19.59■□□□□ 0.73
PRKCA-203ENST00000578063 SLC1A1P43005 524 aa19.59■□□□□ 0.73
PRKCA-203ENST00000578063 SLC11A1P49279 550 aa19.59■□□□□ 0.73
PRKCA-203ENST00000578063 YWHAHQ04917 246 aaPredicted RBP19.59■□□□□ 0.73
PRKCA-203ENST00000578063 CKAP4Q07065 602 aaKnown RBP19.59■□□□□ 0.73
PRKCA-203ENST00000578063 INTS6LQ5JSJ4 861 aaKnown RBP19.59■□□□□ 0.73
PRKCA-203ENST00000578063 PPP1R15BQ5SWA1 713 aa19.59■□□□□ 0.73
PRKCA-203ENST00000578063 DCUN1D2Q6PH85 259 aa19.59■□□□□ 0.73
PRKCA-203ENST00000578063 TOP1MTQ969P6 601 aa19.59■□□□□ 0.73
PRKCA-203ENST00000578063 MCRS1Q96EZ8 462 aa19.59■□□□□ 0.73
PRKCA-203ENST00000578063 BTBD6Q96KE9 485 aa19.59■□□□□ 0.73
PRKCA-203ENST00000578063 RTP3Q9BQQ7 232 aa19.59■□□□□ 0.73
PRKCA-203ENST00000578063 CARD6Q9BX69 1037 aa19.59■□□□□ 0.73
PRKCA-203ENST00000578063 FAN1Q9Y2M0 1017 aa19.59■□□□□ 0.73
PRKCA-203ENST00000578063 TMEM191CA6NGB0 347 aa19.58■□□□□ 0.72
PRKCA-203ENST00000578063 SIGLEC16A6NMB1 481 aa19.58■□□□□ 0.72
PRKCA-203ENST00000578063 SPOPO43791 374 aa19.58■□□□□ 0.72
PRKCA-203ENST00000578063 PROSCO94903 275 aa19.58■□□□□ 0.72
PRKCA-203ENST00000578063 UPP2O95045 317 aa19.58■□□□□ 0.72
PRKCA-203ENST00000578063 TSPY1Q01534 308 aa19.58■□□□□ 0.72
PRKCA-203ENST00000578063 ELAVL2Q12926 359 aaKnown RBP19.58■□□□□ 0.72
PRKCA-203ENST00000578063 MAPRE1Q15691 268 aaKnown RBP19.58■□□□□ 0.72
PRKCA-203ENST00000578063 PMF1Q6P1K2 205 aa19.58■□□□□ 0.72
PRKCA-203ENST00000578063 TMEM110Q86TL2 294 aa19.58■□□□□ 0.72
PRKCA-203ENST00000578063 MCEEQ96PE7 176 aa19.58■□□□□ 0.72
PRKCA-203ENST00000578063 MED10Q9BTT4 135 aa19.58■□□□□ 0.72
PRKCA-203ENST00000578063 DUSP16Q9BY84 665 aa19.58■□□□□ 0.72
PRKCA-203ENST00000578063 IL23AQ9NPF7 189 aa19.58■□□□□ 0.72
PRKCA-203ENST00000578063 RNF14Q9UBS8 474 aa19.58■□□□□ 0.72
PRKCA-203ENST00000578063 TJP2Q9UDY2 1190 aa19.58■□□□□ 0.72
PRKCA-203ENST00000578063 IP6K2Q9UHH9 426 aa19.58■□□□□ 0.72
PRKCA-203ENST00000578063 SF3B1O75533 1304 aaKnown RBP eCLIP19.57■□□□□ 0.724e-6■■■■■ 159.9
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms