RNA–Protein interactions for RNA: ENST00000577228.1

CDH8-202, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-202ENST00000577228 L1TD1Q5T7N2 865 aaKnown RBP12.69□□□□□ -0.38
CDH8-202ENST00000577228 NAIF1Q69YI7 327 aaPredicted RBP12.69□□□□□ -0.38
CDH8-202ENST00000577228 USP49Q70CQ1 688 aa12.69□□□□□ -0.38
CDH8-202ENST00000577228 TMEM86AQ8N2M4 240 aa12.69□□□□□ -0.38
CDH8-202ENST00000577228 CAMKK1Q8N5S9 505 aa12.69□□□□□ -0.38
CDH8-202ENST00000577228 LRRC52Q8N7C0 313 aa12.69□□□□□ -0.38
CDH8-202ENST00000577228 C1orf127Q8N9H9 656 aa12.69□□□□□ -0.38
CDH8-202ENST00000577228 TTC16Q8NEE8 873 aa12.69□□□□□ -0.38
CDH8-202ENST00000577228 CACTINQ8WUQ7 758 aaKnown RBP12.69□□□□□ -0.38
CDH8-202ENST00000577228 SAAL1Q96ER3 474 aa12.69□□□□□ -0.38
CDH8-202ENST00000577228 TRMT2BQ96GJ1 504 aaKnown RBP12.69□□□□□ -0.38
CDH8-202ENST00000577228 EPSTI1Q96J88 318 aa12.69□□□□□ -0.38
CDH8-202ENST00000577228 HHIPQ96QV1 700 aa12.69□□□□□ -0.38
CDH8-202ENST00000577228 STRA6Q9BX79 667 aa12.69□□□□□ -0.38
CDH8-202ENST00000577228 TMEM206Q9H813 350 aa12.69□□□□□ -0.38
CDH8-202ENST00000577228 FBRSL1Q9HCM7 1045 aaKnown RBP12.69□□□□□ -0.38
CDH8-202ENST00000577228 TRPC7Q9HCX4 862 aa12.69□□□□□ -0.38
CDH8-202ENST00000577228 POLR3BQ9NW08 1133 aaPredicted RBP12.69□□□□□ -0.38
CDH8-202ENST00000577228 DUS2Q9NX74 493 aaKnown RBP12.69□□□□□ -0.38
CDH8-202ENST00000577228 RBAKQ9NYW8 714 aaPredicted RBP12.69□□□□□ -0.38
CDH8-202ENST00000577228 TBC1D7Q9P0N9 293 aa12.69□□□□□ -0.38
CDH8-202ENST00000577228 CCDC39Q9UFE4 941 aa12.69□□□□□ -0.38
CDH8-202ENST00000577228 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.69□□□□□ -0.38
CDH8-202ENST00000577228 PCDHGA5Q9Y5G8 931 aa12.69□□□□□ -0.38
CDH8-202ENST00000577228 DENND4CQ5VZ89 1909 aa12.68□□□□□ -0.38
CDH8-202ENST00000577228 TRAV19A0A0A6YYK7 116 aa12.68□□□□□ -0.38
CDH8-202ENST00000577228 GCNT3O95395 438 aa12.68□□□□□ -0.38
CDH8-202ENST00000577228 CKMP06732 381 aa12.68□□□□□ -0.38
CDH8-202ENST00000577228 USP17L7P0C7H9 530 aa12.68□□□□□ -0.38
CDH8-202ENST00000577228 GJA4P35212 333 aa12.68□□□□□ -0.38
CDH8-202ENST00000577228 MPLP40238 635 aa12.68□□□□□ -0.38
CDH8-202ENST00000577228 KCNA1Q09470 495 aa12.68□□□□□ -0.38
CDH8-202ENST00000577228 USP4Q13107 963 aa12.68□□□□□ -0.38
CDH8-202ENST00000577228 PLA2G2CQ5R387 149 aa12.68□□□□□ -0.38
CDH8-202ENST00000577228 STPG1Q5TH74 334 aa12.68□□□□□ -0.38
CDH8-202ENST00000577228 RRAGBQ5VZM2 374 aa12.68□□□□□ -0.38
CDH8-202ENST00000577228 SPATA2LQ8IUW3 424 aaPredicted RBP12.68□□□□□ -0.38
CDH8-202ENST00000577228 ADGRF2Q8IZF7 708 aa12.68□□□□□ -0.38
CDH8-202ENST00000577228 ZSWIM2Q8NEG5 633 aa12.68□□□□□ -0.38
CDH8-202ENST00000577228 RPLP0P6Q8NHW5 317 aa12.68□□□□□ -0.38
CDH8-202ENST00000577228 SPATA18Q8TC71 538 aa12.68□□□□□ -0.38
CDH8-202ENST00000577228 OSCP1Q8WVF1 389 aa12.68□□□□□ -0.38
CDH8-202ENST00000577228 ATP2A3Q93084 1043 aa12.68□□□□□ -0.38
CDH8-202ENST00000577228 ZC3H10Q96K80 434 aaKnown RBP12.68□□□□□ -0.38
CDH8-202ENST00000577228 MYRFLQ96LU7 910 aa12.68□□□□□ -0.38
CDH8-202ENST00000577228 PKMYT1Q99640 499 aa12.68□□□□□ -0.38
CDH8-202ENST00000577228 ECT2Q9H8V3 914 aa12.68□□□□□ -0.38
CDH8-202ENST00000577228 RXFP3Q9NSD7 469 aa12.68□□□□□ -0.38
CDH8-202ENST00000577228 GTF3C4Q9UKN8 822 aa12.68□□□□□ -0.38
CDH8-202ENST00000577228 ANGPTL2Q9UKU9 493 aa12.68□□□□□ -0.38
CDH8-202ENST00000577228 ITGA11Q9UKX5 1188 aa12.68□□□□□ -0.38
CDH8-202ENST00000577228 WNT6Q9Y6F9 365 aa12.68□□□□□ -0.38
CDH8-202ENST00000577228 ZNF638Q14966 1978 aaKnown RBP12.68□□□□□ -0.38
CDH8-202ENST00000577228 OBSL1O75147 1896 aa12.68□□□□□ -0.38
CDH8-202ENST00000577228 GOLGA8IPA6NC78 632 aa12.67□□□□□ -0.38
CDH8-202ENST00000577228 MYMKA6NI61 221 aa12.67□□□□□ -0.38
CDH8-202ENST00000577228 GOLGA8JA6NMD2 632 aa12.67□□□□□ -0.38
CDH8-202ENST00000577228 APBB3O95704 486 aa12.67□□□□□ -0.38
CDH8-202ENST00000577228 LDHAP00338 332 aaKnown RBP12.67□□□□□ -0.38
CDH8-202ENST00000577228 KRT19P08727 400 aa12.67□□□□□ -0.38
CDH8-202ENST00000577228 GARTP22102 1010 aa12.67□□□□□ -0.38
CDH8-202ENST00000577228 PCSK1P29120 753 aa12.67□□□□□ -0.38
CDH8-202ENST00000577228 TXLNAP40222 546 aa12.67□□□□□ -0.38
CDH8-202ENST00000577228 LHX1P48742 406 aa12.67□□□□□ -0.38
CDH8-202ENST00000577228 RBP5P82980 135 aa12.67□□□□□ -0.38
CDH8-202ENST00000577228 DMC1Q14565 340 aa12.67□□□□□ -0.38
CDH8-202ENST00000577228 ELF2Q15723 593 aa12.67□□□□□ -0.38
CDH8-202ENST00000577228 ZNF77Q15935 545 aa12.67□□□□□ -0.38
CDH8-202ENST00000577228 CCDC142Q17RM4 750 aa12.67□□□□□ -0.38
CDH8-202ENST00000577228 PLK5Q496M5 336 aa12.67□□□□□ -0.38
CDH8-202ENST00000577228 CFAP221Q4G0U5 840 aa12.67□□□□□ -0.38
CDH8-202ENST00000577228 N4BP2L1Q5TBK1 243 aaPredicted RBP12.67□□□□□ -0.38
CDH8-202ENST00000577228 SV2BQ7L1I2 683 aa12.67□□□□□ -0.38
CDH8-202ENST00000577228 SYT13Q7L8C5 426 aa12.67□□□□□ -0.38
CDH8-202ENST00000577228 OSTM1Q86WC4 334 aa12.67□□□□□ -0.38
CDH8-202ENST00000577228 SCN4BQ8IWT1 228 aa12.67□□□□□ -0.38
CDH8-202ENST00000577228 SYCP3Q8IZU3 236 aa12.67□□□□□ -0.38
CDH8-202ENST00000577228 CSGALNACT2Q8N6G5 542 aa12.67□□□□□ -0.38
CDH8-202ENST00000577228 TOP6BLQ8N6T0 577 aa12.67□□□□□ -0.38
CDH8-202ENST00000577228 NOC3LQ8WTT2 800 aaKnown RBP12.67□□□□□ -0.38
CDH8-202ENST00000577228 CD101Q93033 1021 aa12.67□□□□□ -0.38
CDH8-202ENST00000577228 ACDQ96AP0 544 aa12.67□□□□□ -0.38
CDH8-202ENST00000577228 DNAJC19Q96DA6 116 aa12.67□□□□□ -0.38
CDH8-202ENST00000577228 FUBP3Q96I24 572 aaKnown RBP eCLIP12.67□□□□□ -0.38
CDH8-202ENST00000577228 FAM84AQ96KN4 292 aa12.67□□□□□ -0.38
CDH8-202ENST00000577228 SLC22A12Q96S37 553 aa12.67□□□□□ -0.38
CDH8-202ENST00000577228 CYP2S1Q96SQ9 504 aa12.67□□□□□ -0.38
CDH8-202ENST00000577228 SMOC1Q9H4F8 434 aa12.67□□□□□ -0.38
CDH8-202ENST00000577228 VPS45Q9NRW7 570 aa12.67□□□□□ -0.38
CDH8-202ENST00000577228 GDAP2Q9NXN4 497 aa12.67□□□□□ -0.38
CDH8-202ENST00000577228 PCDHB13Q9Y5F0 798 aa12.67□□□□□ -0.38
CDH8-202ENST00000577228 SNX9Q9Y5X1 595 aa12.67□□□□□ -0.38
CDH8-202ENST00000577228 CLIC4Q9Y696 253 aa12.67□□□□□ -0.38
CDH8-202ENST00000577228 ATG2BQ96BY7 2078 aa12.66□□□□□ -0.38
CDH8-202ENST00000577228 VPS37CA5D8V6 355 aaPredicted RBP12.66□□□□□ -0.38
CDH8-202ENST00000577228 TM4SF5O14894 197 aa12.66□□□□□ -0.38
CDH8-202ENST00000577228 HCRTO43612 131 aa12.66□□□□□ -0.38
CDH8-202ENST00000577228 RHOBTB1O94844 696 aa12.66□□□□□ -0.38
CDH8-202ENST00000577228 TMEM191BP0C7N4 346 aa12.66□□□□□ -0.38
CDH8-202ENST00000577228 IDEP14735 1019 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms