RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 MICAL1Q8TDZ2 1067 aa20.02■□□□□ 0.8
SCARF1-206ENST00000573852 TFAP2BQ92481 460 aa20.02■□□□□ 0.8
SCARF1-206ENST00000573852 ACSS3Q9H6R3 686 aa20.02■□□□□ 0.8
SCARF1-206ENST00000573852 ZWILCHQ9H900 591 aa20.02■□□□□ 0.8
SCARF1-206ENST00000573852 ALG13Q9NP73 1137 aaKnown RBP20.02■□□□□ 0.8
SCARF1-206ENST00000573852 SRCAPQ6ZRS2 3230 aa20.02■□□□□ 0.8
SCARF1-206ENST00000573852 EIF4E1BA6NMX2 242 aaKnown RBP20.02■□□□□ 0.8
SCARF1-206ENST00000573852 H0Y3Z8 333 aa20.02■□□□□ 0.8
SCARF1-206ENST00000573852 PHBP35232 272 aa20.02■□□□□ 0.8
SCARF1-206ENST00000573852 RPL22P35268 128 aaKnown RBP20.02■□□□□ 0.8
SCARF1-206ENST00000573852 TNFSF9P41273 254 aa20.02■□□□□ 0.8
SCARF1-206ENST00000573852 NAMPTP43490 491 aa20.02■□□□□ 0.8
SCARF1-206ENST00000573852 SP2Q02086 613 aa20.02■□□□□ 0.8
SCARF1-206ENST00000573852 KCNT1Q5JUK3 1230 aa20.02■□□□□ 0.8
SCARF1-206ENST00000573852 SPDYAQ5MJ70 313 aa20.02■□□□□ 0.8
SCARF1-206ENST00000573852 WASHC2DQ5SRD0 308 aa20.02■□□□□ 0.8
SCARF1-206ENST00000573852 SNRNP48Q6IEG0 339 aaKnown RBP20.02■□□□□ 0.8
SCARF1-206ENST00000573852 PCGF5Q86SE9 256 aa20.02■□□□□ 0.8
SCARF1-206ENST00000573852 ARFGAP1Q8N6T3 406 aa20.02■□□□□ 0.8
SCARF1-206ENST00000573852 NIPA2Q8N8Q9 360 aa20.02■□□□□ 0.8
SCARF1-206ENST00000573852 FBXO36Q8NEA4 188 aa20.02■□□□□ 0.8
SCARF1-206ENST00000573852 DCAKDQ8WVC6 231 aa20.02■□□□□ 0.8
SCARF1-206ENST00000573852 MIPEPQ99797 713 aa20.02■□□□□ 0.8
SCARF1-206ENST00000573852 IMPG2Q9BZV3 1241 aa20.02■□□□□ 0.8
SCARF1-206ENST00000573852 TLE6Q9H808 572 aa20.02■□□□□ 0.8
SCARF1-206ENST00000573852 FETUBQ9UGM5 382 aa20.02■□□□□ 0.8
SCARF1-206ENST00000573852 IL1R2P27930 398 aa20.01■□□□□ 0.79
SCARF1-206ENST00000573852 RFC1P35251 1148 aaPredicted RBP20.01■□□□□ 0.79
SCARF1-206ENST00000573852 ARL2P36404 184 aa20.01■□□□□ 0.79
SCARF1-206ENST00000573852 MYL6P60660 151 aa20.01■□□□□ 0.79
SCARF1-206ENST00000573852 ZC3H12AQ5D1E8 599 aaKnown RBP20.01■□□□□ 0.79
SCARF1-206ENST00000573852 ENDOVQ8N8Q3 282 aaKnown RBP20.01■□□□□ 0.79
SCARF1-206ENST00000573852 BANPQ8N9N5 519 aa20.01■□□□□ 0.79
SCARF1-206ENST00000573852 PTPRN2Q92932 1015 aa20.01■□□□□ 0.79
SCARF1-206ENST00000573852 TEPSINQ96N21 525 aa20.01■□□□□ 0.79
SCARF1-206ENST00000573852 DHX33Q9H6R0 707 aaKnown RBP20.01■□□□□ 0.79
SCARF1-206ENST00000573852 CISHQ9NSE2 258 aa20.01■□□□□ 0.79
SCARF1-206ENST00000573852 KCNG1Q9UIX4 513 aa20.01■□□□□ 0.79
SCARF1-206ENST00000573852 AGTPBP1Q9UPW5 1226 aa20.01■□□□□ 0.79
SCARF1-206ENST00000573852 NDC80O14777 642 aa20.01■□□□□ 0.79
SCARF1-206ENST00000573852 CST8O60676 142 aa20.01■□□□□ 0.79
SCARF1-206ENST00000573852 ITGBL1O95965 494 aaPredicted RBP20.01■□□□□ 0.79
SCARF1-206ENST00000573852 SEPT7Q16181 437 aaKnown RBP20.01■□□□□ 0.79
SCARF1-206ENST00000573852 TRIM68Q6AZZ1 485 aa20.01■□□□□ 0.79
SCARF1-206ENST00000573852 ANKRD27Q96NW4 1050 aa20.01■□□□□ 0.79
SCARF1-206ENST00000573852 SAR1AQ9NR31 198 aa20.01■□□□□ 0.79
SCARF1-206ENST00000573852 LNPEPQ9UIQ6 1025 aa20.01■□□□□ 0.79
SCARF1-206ENST00000573852 SIP14410 1827 aa20.01■□□□□ 0.79
SCARF1-206ENST00000573852 TMEM63AO94886 807 aa20■□□□□ 0.79
SCARF1-206ENST00000573852 TROVE2P10155 538 aaKnown RBP eCLIP20■□□□□ 0.79
SCARF1-206ENST00000573852 SLC25A11Q02978 314 aaKnown RBP20■□□□□ 0.79
SCARF1-206ENST00000573852 ZNF398Q8TD17 642 aa20■□□□□ 0.79
SCARF1-206ENST00000573852 MTMR12Q9C0I1 747 aa20■□□□□ 0.79
SCARF1-206ENST00000573852 TJP2Q9UDY2 1190 aa20■□□□□ 0.79
SCARF1-206ENST00000573852 COL11A1P12107 1806 aaPredicted RBP20■□□□□ 0.79
SCARF1-206ENST00000573852 SPATA31C2B4DYI2 1134 aa20■□□□□ 0.79
SCARF1-206ENST00000573852 E7ENQ6 273 aa20■□□□□ 0.79
SCARF1-206ENST00000573852 WEE2P0C1S8 567 aa20■□□□□ 0.79
SCARF1-206ENST00000573852 BBS9Q3SYG4 887 aa20■□□□□ 0.79
SCARF1-206ENST00000573852 RFWD3Q6PCD5 774 aa20■□□□□ 0.79
SCARF1-206ENST00000573852 UNC45BQ8IWX7 931 aa20■□□□□ 0.79
SCARF1-206ENST00000573852 KIAA0319LQ8IZA0 1049 aa20■□□□□ 0.79
SCARF1-206ENST00000573852 JOSD2Q8TAC2 188 aa20■□□□□ 0.79
SCARF1-206ENST00000573852 KCNN1Q92952 543 aa20■□□□□ 0.79
SCARF1-206ENST00000573852 MANSC1Q9H8J5 431 aa20■□□□□ 0.79
SCARF1-206ENST00000573852 E7ESA3 106 aa19.99■□□□□ 0.79
SCARF1-206ENST00000573852 CD48P09326 243 aa19.99■□□□□ 0.79
SCARF1-206ENST00000573852 PSMA2P25787 234 aa19.99■□□□□ 0.79
SCARF1-206ENST00000573852 TAP1Q03518 808 aa19.99■□□□□ 0.79
SCARF1-206ENST00000573852 CAPRIN2Q6IMN6 1127 aaKnown RBP19.99■□□□□ 0.79
SCARF1-206ENST00000573852 POLNQ7Z5Q5 900 aa19.99■□□□□ 0.79
SCARF1-206ENST00000573852 LRRC6Q86X45 466 aa19.99■□□□□ 0.79
SCARF1-206ENST00000573852 PALM2Q8IXS6 379 aa19.99■□□□□ 0.79
SCARF1-206ENST00000573852 REPS2Q8NFH8 660 aa19.99■□□□□ 0.79
SCARF1-206ENST00000573852 SLC24A3Q9HC58 644 aa19.99■□□□□ 0.79
SCARF1-206ENST00000573852 PARP14Q460N5 1801 aa19.99■□□□□ 0.79
SCARF1-206ENST00000573852 A0A0G2JND7 137 aa19.99■□□□□ 0.79
SCARF1-206ENST00000573852 CCDC189A1A4V9 331 aa19.99■□□□□ 0.79
SCARF1-206ENST00000573852 LIN7AO14910 233 aaPredicted RBP19.99■□□□□ 0.79
SCARF1-206ENST00000573852 TM9SF1O15321 606 aa19.99■□□□□ 0.79
SCARF1-206ENST00000573852 LRCH4O75427 683 aa19.99■□□□□ 0.79
SCARF1-206ENST00000573852 LUC7L3O95232 432 aaKnown RBP19.99■□□□□ 0.79
SCARF1-206ENST00000573852 OATP04181 439 aa19.99■□□□□ 0.79
SCARF1-206ENST00000573852 MARK3P27448 753 aa19.99■□□□□ 0.79
SCARF1-206ENST00000573852 KLHL38Q2WGJ6 581 aa19.99■□□□□ 0.79
SCARF1-206ENST00000573852 AGBL3Q8NEM8 1001 aa19.99■□□□□ 0.79
SCARF1-206ENST00000573852 CADM1Q9BY67 442 aaKnown RBP19.99■□□□□ 0.79
SCARF1-206ENST00000573852 VPS11Q9H270 941 aa19.99■□□□□ 0.79
SCARF1-206ENST00000573852 ARL8BQ9NVJ2 186 aa19.99■□□□□ 0.79
SCARF1-206ENST00000573852 CORO1CQ9ULV4 474 aaPredicted RBP19.99■□□□□ 0.79
SCARF1-206ENST00000573852 CDH5P33151 784 aaPredicted RBP19.99■□□□□ 0.79
SCARF1-206ENST00000573852 PTDSS1P48651 473 aaKnown RBP19.99■□□□□ 0.79
SCARF1-206ENST00000573852 NRLP54845 237 aa19.99■□□□□ 0.79
SCARF1-206ENST00000573852 DENND1BQ6P3S1 775 aa19.99■□□□□ 0.79
SCARF1-206ENST00000573852 SCARA5Q6ZMJ2 495 aa19.99■□□□□ 0.79
SCARF1-206ENST00000573852 BBS12Q6ZW61 710 aa19.99■□□□□ 0.79
SCARF1-206ENST00000573852 ZBTB33Q86T24 672 aa19.99■□□□□ 0.79
SCARF1-206ENST00000573852 IGDCC3Q8IVU1 814 aa19.99■□□□□ 0.79
SCARF1-206ENST00000573852 BRSK2Q8IWQ3 736 aa19.99■□□□□ 0.79
SCARF1-206ENST00000573852 RSAD2Q8WXG1 361 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms