RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 PDXKO00764 312 aa13.58□□□□□ -0.24
NPLOC4-213ENST00000573519 CHADO15335 359 aa13.58□□□□□ -0.24
NPLOC4-213ENST00000573519 ZNF202O95125 648 aa13.58□□□□□ -0.24
NPLOC4-213ENST00000573519 PRAMEF12O95522 483 aa13.58□□□□□ -0.24
NPLOC4-213ENST00000573519 HMGA1P17096 107 aaKnown RBP13.58□□□□□ -0.24
NPLOC4-213ENST00000573519 GNL1P36915 607 aaPredicted RBP13.58□□□□□ -0.24
NPLOC4-213ENST00000573519 GRIK1P39086 918 aa13.58□□□□□ -0.24
NPLOC4-213ENST00000573519 KPNA1P52294 538 aaPredicted RBP13.58□□□□□ -0.24
NPLOC4-213ENST00000573519 NLRP12P59046 1061 aa13.58□□□□□ -0.24
NPLOC4-213ENST00000573519 DPYDQ12882 1025 aa13.58□□□□□ -0.24
NPLOC4-213ENST00000573519 MAPRE1Q15691 268 aaKnown RBP13.58□□□□□ -0.24
NPLOC4-213ENST00000573519 CFAP221Q4G0U5 840 aa13.58□□□□□ -0.24
NPLOC4-213ENST00000573519 MDH1BQ5I0G3 518 aa13.58□□□□□ -0.24
NPLOC4-213ENST00000573519 TXNDC8Q6A555 127 aa13.58□□□□□ -0.24
NPLOC4-213ENST00000573519 FAM171BQ6P995 826 aa13.58□□□□□ -0.24
NPLOC4-213ENST00000573519 TTC16Q8NEE8 873 aa13.58□□□□□ -0.24
NPLOC4-213ENST00000573519 PLEKHO2Q8TD55 490 aa13.58□□□□□ -0.24
NPLOC4-213ENST00000573519 FAM3CQ92520 227 aa13.58□□□□□ -0.24
NPLOC4-213ENST00000573519 MRPS31Q92665 395 aaKnown RBP13.58□□□□□ -0.24
NPLOC4-213ENST00000573519 NKD2Q969F2 451 aaPredicted RBP13.58□□□□□ -0.24
NPLOC4-213ENST00000573519 SYAP1Q96A49 352 aaPredicted RBP13.58□□□□□ -0.24
NPLOC4-213ENST00000573519 CCDC34Q96HJ3 373 aa13.58□□□□□ -0.24
NPLOC4-213ENST00000573519 FUBP3Q96I24 572 aaKnown RBP eCLIP13.58□□□□□ -0.24
NPLOC4-213ENST00000573519 ZFYVE19Q96K21 471 aa13.58□□□□□ -0.24
NPLOC4-213ENST00000573519 SLC46A2Q9BY10 475 aa13.58□□□□□ -0.24
NPLOC4-213ENST00000573519 OSBPL6Q9BZF3 934 aa13.58□□□□□ -0.24
NPLOC4-213ENST00000573519 GZF1Q9H116 711 aaPredicted RBP13.58□□□□□ -0.24
NPLOC4-213ENST00000573519 TRPC7Q9HCX4 862 aa13.58□□□□□ -0.24
NPLOC4-213ENST00000573519 CRTAC1Q9NQ79 661 aa13.58□□□□□ -0.24
NPLOC4-213ENST00000573519 UXTQ9UBK9 157 aaPredicted RBP13.58□□□□□ -0.24
NPLOC4-213ENST00000573519 FRMD4BQ9Y2L6 1034 aa13.58□□□□□ -0.24
NPLOC4-213ENST00000573519 A8MXQ7 604 aa13.57□□□□□ -0.24
NPLOC4-213ENST00000573519 LAMTOR5O43504 91 aa13.57□□□□□ -0.24
NPLOC4-213ENST00000573519 RHOBTB3O94955 611 aa13.57□□□□□ -0.24
NPLOC4-213ENST00000573519 F11P03951 625 aa13.57□□□□□ -0.24
NPLOC4-213ENST00000573519 BDNFP23560 247 aa13.57□□□□□ -0.24
NPLOC4-213ENST00000573519 CCNE1P24864 410 aa13.57□□□□□ -0.24
NPLOC4-213ENST00000573519 ANXA13P27216 316 aa13.57□□□□□ -0.24
NPLOC4-213ENST00000573519 ATICP31939 592 aa13.57□□□□□ -0.24
NPLOC4-213ENST00000573519 AP3M2P53677 418 aa13.57□□□□□ -0.24
NPLOC4-213ENST00000573519 DLG4P78352 724 aa13.57□□□□□ -0.24
NPLOC4-213ENST00000573519 FCHO2Q0JRZ9 810 aa13.57□□□□□ -0.24
NPLOC4-213ENST00000573519 ZNF699Q32M78 642 aa13.57□□□□□ -0.24
NPLOC4-213ENST00000573519 ARHGAP29Q52LW3 1261 aa13.57□□□□□ -0.24
NPLOC4-213ENST00000573519 TDRD10Q5VZ19 366 aaKnown RBP13.57□□□□□ -0.24
NPLOC4-213ENST00000573519 SCARA5Q6ZMJ2 495 aa13.57□□□□□ -0.24
NPLOC4-213ENST00000573519 ASCL5Q7RTU5 278 aa13.57□□□□□ -0.24
NPLOC4-213ENST00000573519 LIMS2Q7Z4I7 341 aa13.57□□□□□ -0.24
NPLOC4-213ENST00000573519 TMEM150AQ86TG1 271 aa13.57□□□□□ -0.24
NPLOC4-213ENST00000573519 SLC9A9Q8IVB4 645 aa13.57□□□□□ -0.24
NPLOC4-213ENST00000573519 CMTM8Q8IZV2 173 aa13.57□□□□□ -0.24
NPLOC4-213ENST00000573519 CELF5Q8N6W0 485 aaKnown RBP13.57□□□□□ -0.24
NPLOC4-213ENST00000573519 BPIFB1Q8TDL5 484 aa13.57□□□□□ -0.24
NPLOC4-213ENST00000573519 PARD3BQ8TEW8 1205 aa13.57□□□□□ -0.24
NPLOC4-213ENST00000573519 ELMO3Q96BJ8 720 aa13.57□□□□□ -0.24
NPLOC4-213ENST00000573519 LRRC3BQ96PB8 259 aa13.57□□□□□ -0.24
NPLOC4-213ENST00000573519 TRPV5Q9NQA5 729 aa13.57□□□□□ -0.24
NPLOC4-213ENST00000573519 DMAC2Q9NW81 257 aa13.57□□□□□ -0.24
NPLOC4-213ENST00000573519 THG1LQ9NWX6 298 aaKnown RBP13.57□□□□□ -0.24
NPLOC4-213ENST00000573519 OBP2AQ9NY56 170 aa13.57□□□□□ -0.24
NPLOC4-213ENST00000573519 R4GN57 208 aa13.57□□□□□ -0.24
NPLOC4-213ENST00000573519 PROB1E7EW31 1015 aa13.56□□□□□ -0.24
NPLOC4-213ENST00000573519 ARNTLO00327 626 aa13.56□□□□□ -0.24
NPLOC4-213ENST00000573519 TACC1O75410 805 aa13.56□□□□□ -0.24
NPLOC4-213ENST00000573519 NOL4O94818 638 aa13.56□□□□□ -0.24
NPLOC4-213ENST00000573519 SP9P0CG40 484 aa13.56□□□□□ -0.24
NPLOC4-213ENST00000573519 DDX6P26196 483 aaKnown RBP eCLIP13.56□□□□□ -0.249e-7■■■□□ 16.7
NPLOC4-213ENST00000573519 MAGEA9P43362 315 aa13.56□□□□□ -0.24
NPLOC4-213ENST00000573519 RAP1GAPP47736 663 aa13.56□□□□□ -0.24
NPLOC4-213ENST00000573519 SOX9P48436 509 aa13.56□□□□□ -0.24
NPLOC4-213ENST00000573519 NCOA4Q13772 614 aa13.56□□□□□ -0.24
NPLOC4-213ENST00000573519 ZNF667Q5HYK9 610 aa13.56□□□□□ -0.24
NPLOC4-213ENST00000573519 MYCBPAPQ8TBZ2 947 aa13.56□□□□□ -0.24
NPLOC4-213ENST00000573519 PCED1BQ96HM7 432 aa13.56□□□□□ -0.24
NPLOC4-213ENST00000573519 XYLT2Q9H1B5 865 aa13.56□□□□□ -0.24
NPLOC4-213ENST00000573519 DPEP3Q9H4B8 488 aa13.56□□□□□ -0.24
NPLOC4-213ENST00000573519 GTSE1Q9NYZ3 720 aa13.56□□□□□ -0.24
NPLOC4-213ENST00000573519 ZMYM5Q9UJ78 669 aa13.56□□□□□ -0.24
NPLOC4-213ENST00000573519 TICRRQ7Z2Z1 1910 aa13.56□□□□□ -0.24
NPLOC4-213ENST00000573519 PRR23AA6NEV1 266 aa13.55□□□□□ -0.24
NPLOC4-213ENST00000573519 SHISA7A6NL88 538 aa13.55□□□□□ -0.24
NPLOC4-213ENST00000573519 STAU1O95793 577 aaKnown RBP13.55□□□□□ -0.24
NPLOC4-213ENST00000573519 C4BPAP04003 597 aaKnown RBP13.55□□□□□ -0.24
NPLOC4-213ENST00000573519 PTPN1P18031 435 aaKnown RBP13.55□□□□□ -0.24
NPLOC4-213ENST00000573519 NR2F2P24468 414 aa13.55□□□□□ -0.24
NPLOC4-213ENST00000573519 WEE1P30291 646 aa13.55□□□□□ -0.24
NPLOC4-213ENST00000573519 MAGEA11P43364 429 aa13.55□□□□□ -0.24
NPLOC4-213ENST00000573519 CDH8P55286 799 aa13.55□□□□□ -0.24
NPLOC4-213ENST00000573519 CSTF1Q05048 431 aaKnown RBP13.55□□□□□ -0.24
NPLOC4-213ENST00000573519 TNK2Q07912 1038 aa13.55□□□□□ -0.24
NPLOC4-213ENST00000573519 ZC3H14Q6PJT7 736 aaKnown RBP13.55□□□□□ -0.24
NPLOC4-213ENST00000573519 VSTM1Q6UX27 236 aa13.55□□□□□ -0.24
NPLOC4-213ENST00000573519 MON1AQ86VX9 555 aa13.55□□□□□ -0.24
NPLOC4-213ENST00000573519 FMR1NBQ8N0W7 255 aaPredicted RBP13.55□□□□□ -0.24
NPLOC4-213ENST00000573519 USP13Q92995 863 aaPredicted RBP13.55□□□□□ -0.24
NPLOC4-213ENST00000573519 CLDN23Q96B33 292 aa13.55□□□□□ -0.24
NPLOC4-213ENST00000573519 TRMT2BQ96GJ1 504 aaKnown RBP13.55□□□□□ -0.24
NPLOC4-213ENST00000573519 SMYD3Q9H7B4 428 aa13.55□□□□□ -0.24
NPLOC4-213ENST00000573519 C8orf33Q9H7E9 229 aaPredicted RBP13.55□□□□□ -0.24
NPLOC4-213ENST00000573519 LMAN1LQ9HAT1 526 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms