RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 ZNF318Q5VUA4 2279 aa10.94□□□□□ -0.66
GTF3C1-213ENST00000571886 ZNF638Q14966 1978 aaKnown RBP10.94□□□□□ -0.66
GTF3C1-213ENST00000571886 SLC38A8A6NNN8 435 aa10.93□□□□□ -0.66
GTF3C1-213ENST00000571886 A8MXQ7 604 aa10.93□□□□□ -0.66
GTF3C1-213ENST00000571886 TADA3O75528 432 aa10.93□□□□□ -0.66
GTF3C1-213ENST00000571886 ASS1P00966 412 aaKnown RBP10.93□□□□□ -0.66
GTF3C1-213ENST00000571886 F11P03951 625 aa10.93□□□□□ -0.66
GTF3C1-213ENST00000571886 KRT13P13646 458 aa10.93□□□□□ -0.66
GTF3C1-213ENST00000571886 PIK3CAP42336 1068 aa10.93□□□□□ -0.66
GTF3C1-213ENST00000571886 ASPAP45381 313 aa10.93□□□□□ -0.66
GTF3C1-213ENST00000571886 STX17P56962 302 aa10.93□□□□□ -0.66
GTF3C1-213ENST00000571886 FKBP3Q00688 224 aaKnown RBP10.93□□□□□ -0.66
GTF3C1-213ENST00000571886 CYP27A1Q02318 531 aa10.93□□□□□ -0.66
GTF3C1-213ENST00000571886 GRM2Q14416 872 aa10.93□□□□□ -0.66
GTF3C1-213ENST00000571886 SGSM1Q2NKQ1 1148 aa10.93□□□□□ -0.66
GTF3C1-213ENST00000571886 CFAP221Q4G0U5 840 aa10.93□□□□□ -0.66
GTF3C1-213ENST00000571886 CBWD6Q4V339 395 aa10.93□□□□□ -0.66
GTF3C1-213ENST00000571886 CBWD3Q5JTY5 395 aa10.93□□□□□ -0.66
GTF3C1-213ENST00000571886 CBWD5Q5RIA9 395 aa10.93□□□□□ -0.66
GTF3C1-213ENST00000571886 GPR158Q5T848 1215 aa10.93□□□□□ -0.66
GTF3C1-213ENST00000571886 CWF19L1Q69YN2 538 aaKnown RBP10.93□□□□□ -0.66
GTF3C1-213ENST00000571886 TTI2Q6NXR4 508 aa10.93□□□□□ -0.66
GTF3C1-213ENST00000571886 VITQ6UXI7 678 aa10.93□□□□□ -0.66
GTF3C1-213ENST00000571886 CLEC17AQ6ZS10 378 aa10.93□□□□□ -0.66
GTF3C1-213ENST00000571886 PAQR9Q6ZVX9 377 aa10.93□□□□□ -0.66
GTF3C1-213ENST00000571886 MTSS1LQ765P7 747 aa10.93□□□□□ -0.66
GTF3C1-213ENST00000571886 SCN4BQ8IWT1 228 aa10.93□□□□□ -0.66
GTF3C1-213ENST00000571886 SIX5Q8N196 739 aa10.93□□□□□ -0.66
GTF3C1-213ENST00000571886 FBXL6Q8N531 539 aa10.93□□□□□ -0.66
GTF3C1-213ENST00000571886 LEMD2Q8NC56 503 aa10.93□□□□□ -0.66
GTF3C1-213ENST00000571886 ZSCAN18Q8TBC5 510 aaPredicted RBP10.93□□□□□ -0.66
GTF3C1-213ENST00000571886 MYCBPAPQ8TBZ2 947 aa10.93□□□□□ -0.66
GTF3C1-213ENST00000571886 NELFBQ8WX92 580 aa10.93□□□□□ -0.66
GTF3C1-213ENST00000571886 TATDN2Q93075 761 aa10.93□□□□□ -0.66
GTF3C1-213ENST00000571886 DHTKD1Q96HY7 919 aaPredicted RBP10.93□□□□□ -0.66
GTF3C1-213ENST00000571886 MED15Q96RN5 788 aa10.93□□□□□ -0.66
GTF3C1-213ENST00000571886 TMEM8AQ9HCN3 771 aa10.93□□□□□ -0.66
GTF3C1-213ENST00000571886 ABCB6Q9NP58 842 aa10.93□□□□□ -0.66
GTF3C1-213ENST00000571886 SLC2A4RGQ9NR83 387 aa10.93□□□□□ -0.66
GTF3C1-213ENST00000571886 LMBRD1Q9NUN5 540 aa10.93□□□□□ -0.66
GTF3C1-213ENST00000571886 KIAA1468Q9P260 1216 aa10.93□□□□□ -0.66
GTF3C1-213ENST00000571886 MAGEC2Q9UBF1 373 aaPredicted RBP10.93□□□□□ -0.66
GTF3C1-213ENST00000571886 MAGED2Q9UNF1 606 aaPredicted RBP10.93□□□□□ -0.66
GTF3C1-213ENST00000571886 CTNND2Q9UQB3 1225 aa10.93□□□□□ -0.66
GTF3C1-213ENST00000571886 MYH10P35580 1976 aa10.93□□□□□ -0.66
GTF3C1-213ENST00000571886 ECI2O75521 394 aa10.92□□□□□ -0.66
GTF3C1-213ENST00000571886 EPB41P11171 864 aaKnown RBP10.92□□□□□ -0.66
GTF3C1-213ENST00000571886 AVPR2P30518 371 aa10.92□□□□□ -0.66
GTF3C1-213ENST00000571886 NDST1P52848 882 aa10.92□□□□□ -0.66
GTF3C1-213ENST00000571886 NLRP12P59046 1061 aa10.92□□□□□ -0.66
GTF3C1-213ENST00000571886 USP46P62068 366 aa10.92□□□□□ -0.66
GTF3C1-213ENST00000571886 VEPH1Q14D04 833 aa10.92□□□□□ -0.66
GTF3C1-213ENST00000571886 ACOT1Q86TX2 421 aa10.92□□□□□ -0.66
GTF3C1-213ENST00000571886 ITIH5Q86UX2 942 aa10.92□□□□□ -0.66
GTF3C1-213ENST00000571886 ARID3BQ8IVW6 561 aaPredicted RBP10.92□□□□□ -0.66
GTF3C1-213ENST00000571886 TMEM105Q8N8V8 129 aa10.92□□□□□ -0.66
GTF3C1-213ENST00000571886 B3GALNT2Q8NCR0 500 aa10.92□□□□□ -0.66
GTF3C1-213ENST00000571886 SMARCD2Q92925 531 aa10.92□□□□□ -0.66
GTF3C1-213ENST00000571886 ELSPBP1Q96BH3 223 aa10.92□□□□□ -0.66
GTF3C1-213ENST00000571886 FUBP3Q96I24 572 aaKnown RBP eCLIP10.92□□□□□ -0.66
GTF3C1-213ENST00000571886 TWNKQ96RR1 684 aa10.92□□□□□ -0.66
GTF3C1-213ENST00000571886 TSG101Q99816 390 aa10.92□□□□□ -0.66
GTF3C1-213ENST00000571886 SLC46A2Q9BY10 475 aa10.92□□□□□ -0.66
GTF3C1-213ENST00000571886 BCO2Q9BYV7 579 aa10.92□□□□□ -0.66
GTF3C1-213ENST00000571886 ZNF518BQ9C0D4 1074 aa10.92□□□□□ -0.66
GTF3C1-213ENST00000571886 SMG9Q9H0W8 520 aaKnown RBP10.92□□□□□ -0.66
GTF3C1-213ENST00000571886 ZFP14Q9HCL3 533 aa10.92□□□□□ -0.66
GTF3C1-213ENST00000571886 WNT16Q9UBV4 365 aa10.92□□□□□ -0.66
GTF3C1-213ENST00000571886 FBXL21Q9UKT6 434 aa10.92□□□□□ -0.66
GTF3C1-213ENST00000571886 NUP210Q8TEM1 1887 aaPredicted RBP10.91□□□□□ -0.66
GTF3C1-213ENST00000571886 SHISA7A6NL88 538 aa10.91□□□□□ -0.66
GTF3C1-213ENST00000571886 HEPACAM2A8MVW5 462 aa10.91□□□□□ -0.66
GTF3C1-213ENST00000571886 F8VP50 259 aa10.91□□□□□ -0.66
GTF3C1-213ENST00000571886 PSMA7O14818 248 aa10.91□□□□□ -0.66
GTF3C1-213ENST00000571886 NOL4O94818 638 aa10.91□□□□□ -0.66
GTF3C1-213ENST00000571886 CLSTN1O94985 981 aa10.91□□□□□ -0.66
GTF3C1-213ENST00000571886 CSH1P0DML2 217 aa10.91□□□□□ -0.66
GTF3C1-213ENST00000571886 CSH2P0DML3 217 aa10.91□□□□□ -0.66
GTF3C1-213ENST00000571886 GTF2H1P32780 548 aa10.91□□□□□ -0.66
GTF3C1-213ENST00000571886 GRIK1P39086 918 aa10.91□□□□□ -0.66
GTF3C1-213ENST00000571886 MAGEA11P43364 429 aa10.91□□□□□ -0.66
GTF3C1-213ENST00000571886 RPL10AP62906 217 aaKnown RBP10.91□□□□□ -0.66
GTF3C1-213ENST00000571886 NOP14P78316 857 aaKnown RBP10.91□□□□□ -0.66
GTF3C1-213ENST00000571886 LRRC63Q05C16 580 aa10.91□□□□□ -0.66
GTF3C1-213ENST00000571886 ENPEPQ07075 957 aa10.91□□□□□ -0.66
GTF3C1-213ENST00000571886 TAF12Q16514 161 aa10.91□□□□□ -0.66
GTF3C1-213ENST00000571886 DCAF17Q5H9S7 520 aaPredicted RBP10.91□□□□□ -0.66
GTF3C1-213ENST00000571886 KRT39Q6A163 491 aa10.91□□□□□ -0.66
GTF3C1-213ENST00000571886 TXNDC8Q6A555 127 aa10.91□□□□□ -0.66
GTF3C1-213ENST00000571886 C4orf50Q6ZRC1 276 aa10.91□□□□□ -0.66
GTF3C1-213ENST00000571886 FILIP1Q7Z7B0 1213 aa10.91□□□□□ -0.66
GTF3C1-213ENST00000571886 C12orf29Q8N999 325 aa10.91□□□□□ -0.66
GTF3C1-213ENST00000571886 FLCNQ8NFG4 579 aa10.91□□□□□ -0.66
GTF3C1-213ENST00000571886 WHAMMQ8TF30 809 aa10.91□□□□□ -0.66
GTF3C1-213ENST00000571886 SLITRK6Q9H5Y7 841 aa10.91□□□□□ -0.66
GTF3C1-213ENST00000571886 TRPV4Q9HBA0 871 aa10.91□□□□□ -0.66
GTF3C1-213ENST00000571886 TICRRQ7Z2Z1 1910 aa10.91□□□□□ -0.66
GTF3C1-213ENST00000571886 KIF26AQ9ULI4 1882 aaPredicted RBP10.91□□□□□ -0.66
GTF3C1-213ENST00000571886 COL4A2P08572 1712 aa10.9□□□□□ -0.66
GTF3C1-213ENST00000571886 SLC16A3O15427 465 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms