RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 LPCAT2Q7L5N7 544 aa7.82□□□□□ -1.16
SMG6-205ENST00000570659 NAXDQ8IW45 347 aa7.82□□□□□ -1.16
SMG6-205ENST00000570659 MCPH1Q8NEM0 835 aa7.82□□□□□ -1.16
SMG6-205ENST00000570659 APPL2Q8NEU8 664 aa7.82□□□□□ -1.16
SMG6-205ENST00000570659 KNL1Q8NG31 2342 aa7.82□□□□□ -1.16
SMG6-205ENST00000570659 OSCP1Q8WVF1 389 aa7.82□□□□□ -1.16
SMG6-205ENST00000570659 SENP8Q96LD8 212 aa7.82□□□□□ -1.16
SMG6-205ENST00000570659 DCBLD2Q96PD2 775 aa7.82□□□□□ -1.16
SMG6-205ENST00000570659 ACOX2Q99424 681 aa7.82□□□□□ -1.16
SMG6-205ENST00000570659 CCDC94Q9BW85 323 aaPredicted RBP7.82□□□□□ -1.16
SMG6-205ENST00000570659 NUSAP1Q9BXS6 441 aaKnown RBP7.82□□□□□ -1.16
SMG6-205ENST00000570659 C22orf23Q9BZE7 217 aa7.82□□□□□ -1.16
SMG6-205ENST00000570659 BHMT2Q9H2M3 363 aa7.82□□□□□ -1.16
SMG6-205ENST00000570659 PRORYQ9H606 182 aa7.82□□□□□ -1.16
SMG6-205ENST00000570659 SLC38A7Q9NVC3 462 aa7.82□□□□□ -1.16
SMG6-205ENST00000570659 DNAAF2Q9NVR5 837 aaKnown RBP7.82□□□□□ -1.16
SMG6-205ENST00000570659 DUS2Q9NX74 493 aaKnown RBP7.82□□□□□ -1.16
SMG6-205ENST00000570659 ANKFY1Q9P2R3 1169 aa7.82□□□□□ -1.16
SMG6-205ENST00000570659 MAFFQ9ULX9 164 aa7.82□□□□□ -1.16
SMG6-205ENST00000570659 SLC6A14Q9UN76 642 aa7.82□□□□□ -1.16
SMG6-205ENST00000570659 MAGED2Q9UNF1 606 aaPredicted RBP7.82□□□□□ -1.16
SMG6-205ENST00000570659 TCHHQ07283 1943 aa7.82□□□□□ -1.16
SMG6-205ENST00000570659 CABIN1Q9Y6J0 2220 aa7.81□□□□□ -1.16
SMG6-205ENST00000570659 IGHV1OR15-9A0A0B4J2B8 117 aa7.81□□□□□ -1.16
SMG6-205ENST00000570659 TCRBV21S2A2A0A5A6 115 aa7.81□□□□□ -1.16
SMG6-205ENST00000570659 OR6C75A6NL08 312 aa7.81□□□□□ -1.16
SMG6-205ENST00000570659 BTBD18B2RXH4 712 aa7.81□□□□□ -1.16
SMG6-205ENST00000570659 TISP43B9A030 160 aa7.81□□□□□ -1.16
SMG6-205ENST00000570659 E9PMD0 336 aa7.81□□□□□ -1.16
SMG6-205ENST00000570659 K7ERI5 159 aa7.81□□□□□ -1.16
SMG6-205ENST00000570659 ARHGAP33O14559 1287 aa7.81□□□□□ -1.16
SMG6-205ENST00000570659 ATXN7O15265 892 aaPredicted RBP7.81□□□□□ -1.16
SMG6-205ENST00000570659 MARCH6O60337 910 aa7.81□□□□□ -1.16
SMG6-205ENST00000570659 OPHN1O60890 802 aa7.81□□□□□ -1.16
SMG6-205ENST00000570659 HIP1RO75146 1068 aa7.81□□□□□ -1.16
SMG6-205ENST00000570659 SERPINF2P08697 491 aa7.81□□□□□ -1.16
SMG6-205ENST00000570659 MCF2P10911 925 aa7.81□□□□□ -1.16
SMG6-205ENST00000570659 EIF2S3P41091 472 aaKnown RBP7.81□□□□□ -1.16
SMG6-205ENST00000570659 LILRA4P59901 499 aa7.81□□□□□ -1.16
SMG6-205ENST00000570659 USP46P62068 366 aa7.81□□□□□ -1.16
SMG6-205ENST00000570659 KDSRQ06136 332 aa7.81□□□□□ -1.16
SMG6-205ENST00000570659 C19orf57Q0VDD7 668 aa7.81□□□□□ -1.16
SMG6-205ENST00000570659 ST3GAL1Q11201 340 aa7.81□□□□□ -1.16
SMG6-205ENST00000570659 MYBPC2Q14324 1141 aa7.81□□□□□ -1.16
SMG6-205ENST00000570659 ENOX2Q16206 610 aaKnown RBP7.81□□□□□ -1.16
SMG6-205ENST00000570659 DDR2Q16832 855 aa7.81□□□□□ -1.16
SMG6-205ENST00000570659 WSCD1Q658N2 575 aa7.81□□□□□ -1.16
SMG6-205ENST00000570659 SLC39A4Q6P5W5 647 aa7.81□□□□□ -1.16
SMG6-205ENST00000570659 MPZL3Q6UWV2 235 aa7.81□□□□□ -1.16
SMG6-205ENST00000570659 TMPRSS7Q7RTY8 843 aa7.81□□□□□ -1.16
SMG6-205ENST00000570659 MON1AQ86VX9 555 aa7.81□□□□□ -1.16
SMG6-205ENST00000570659 SLFN12Q8IYM2 578 aa7.81□□□□□ -1.16
SMG6-205ENST00000570659 ARL14EPQ8N8R7 260 aaPredicted RBP7.81□□□□□ -1.16
SMG6-205ENST00000570659 SH3RF2Q8TEC5 729 aa7.81□□□□□ -1.16
SMG6-205ENST00000570659 ACDQ96AP0 544 aa7.81□□□□□ -1.16
SMG6-205ENST00000570659 PKMYT1Q99640 499 aa7.81□□□□□ -1.16
SMG6-205ENST00000570659 HNRNPABQ99729 332 aaKnown RBP7.81□□□□□ -1.16
SMG6-205ENST00000570659 PI4K2AQ9BTU6 479 aa7.81□□□□□ -1.16
SMG6-205ENST00000570659 TRPC7Q9HCX4 862 aa7.81□□□□□ -1.16
SMG6-205ENST00000570659 POLMQ9NP87 494 aaPredicted RBP7.81□□□□□ -1.16
SMG6-205ENST00000570659 THG1LQ9NWX6 298 aaKnown RBP7.81□□□□□ -1.16
SMG6-205ENST00000570659 ABI2Q9NYB9 513 aaPredicted RBP7.81□□□□□ -1.16
SMG6-205ENST00000570659 CALCOCO1Q9P1Z2 691 aa7.81□□□□□ -1.16
SMG6-205ENST00000570659 PCOLCE2Q9UKZ9 415 aa7.81□□□□□ -1.16
SMG6-205ENST00000570659 TPCN1Q9ULQ1 816 aa7.81□□□□□ -1.16
SMG6-205ENST00000570659 FNDC3AQ9Y2H6 1198 aaKnown RBP7.81□□□□□ -1.16
SMG6-205ENST00000570659 ASB3Q9Y575 518 aa7.81□□□□□ -1.16
SMG6-205ENST00000570659 PHLPP2Q6ZVD8 1323 aa7.8□□□□□ -1.16
SMG6-205ENST00000570659 NPHP3-ACAD11A0A0J9YXS1 232 aa7.8□□□□□ -1.16
SMG6-205ENST00000570659 A0A1W2PQF6 199 aa7.8□□□□□ -1.16
SMG6-205ENST00000570659 ARHGEF35A5YM69 484 aa7.8□□□□□ -1.16
SMG6-205ENST00000570659 GOLGA8CPA6NN73 597 aa7.8□□□□□ -1.16
SMG6-205ENST00000570659 CCDC169A6NNP5 214 aa7.8□□□□□ -1.16
SMG6-205ENST00000570659 H0Y626 953 aa7.8□□□□□ -1.16
SMG6-205ENST00000570659 TRIM16O95361 564 aa7.8□□□□□ -1.16
SMG6-205ENST00000570659 XRCC6P12956 609 aaKnown RBP eCLIP7.8□□□□□ -1.16
SMG6-205ENST00000570659 ACAT1P24752 427 aaKnown RBP7.8□□□□□ -1.16
SMG6-205ENST00000570659 CYP2F1P24903 491 aa7.8□□□□□ -1.16
SMG6-205ENST00000570659 MARCKSP29966 332 aaPredicted RBP7.8□□□□□ -1.16
SMG6-205ENST00000570659 CDC25CP30307 473 aa7.8□□□□□ -1.16
SMG6-205ENST00000570659 AVPR1AP37288 418 aa7.8□□□□□ -1.16
SMG6-205ENST00000570659 YARSP54577 528 aaKnown RBP7.8□□□□□ -1.16
SMG6-205ENST00000570659 RPL6Q02878 288 aaKnown RBP7.8□□□□□ -1.16
SMG6-205ENST00000570659 GFPT1Q06210 699 aaPredicted RBP7.8□□□□□ -1.16
SMG6-205ENST00000570659 ZNF33AQ06730 810 aa7.8□□□□□ -1.16
SMG6-205ENST00000570659 SRSF1Q07955 248 aaKnown RBP eCLIP7.8□□□□□ -1.16
SMG6-205ENST00000570659 RAD51AP2Q09MP3 1159 aa7.8□□□□□ -1.16
SMG6-205ENST00000570659 BFSP1Q12934 665 aa7.8□□□□□ -1.16
SMG6-205ENST00000570659 GRIK2Q13002 908 aa7.8□□□□□ -1.16
SMG6-205ENST00000570659 PDGFRLQ15198 375 aa7.8□□□□□ -1.16
SMG6-205ENST00000570659 IL17AQ16552 155 aa7.8□□□□□ -1.16
SMG6-205ENST00000570659 FBXO43Q4G163 708 aa7.8□□□□□ -1.16
SMG6-205ENST00000570659 JADE1Q6IE81 842 aa7.8□□□□□ -1.16
SMG6-205ENST00000570659 GALNT17Q6IS24 598 aa7.8□□□□□ -1.16
SMG6-205ENST00000570659 DSTYKQ6XUX3 929 aa7.8□□□□□ -1.16
SMG6-205ENST00000570659 OSTM1Q86WC4 334 aa7.8□□□□□ -1.16
SMG6-205ENST00000570659 CPA6Q8N4T0 437 aa7.8□□□□□ -1.16
SMG6-205ENST00000570659 TRIML1Q8N9V2 468 aa7.8□□□□□ -1.16
SMG6-205ENST00000570659 ZSWIM2Q8NEG5 633 aa7.8□□□□□ -1.16
SMG6-205ENST00000570659 HSPA12BQ96MM6 686 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms