RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 A0A1W2PQD8 194 aa18.3■□□□□ 0.52
MAP1LC3B-208ENST00000570189 PDXKO00764 312 aa18.3■□□□□ 0.52
MAP1LC3B-208ENST00000570189 TNNI1P19237 187 aa18.3■□□□□ 0.52
MAP1LC3B-208ENST00000570189 CD72P21854 359 aa18.3■□□□□ 0.52
MAP1LC3B-208ENST00000570189 ATICP31939 592 aa18.3■□□□□ 0.52
MAP1LC3B-208ENST00000570189 CYP2J2P51589 502 aa18.3■□□□□ 0.52
MAP1LC3B-208ENST00000570189 STK4Q13043 487 aa18.3■□□□□ 0.52
MAP1LC3B-208ENST00000570189 ZNF268Q14587 947 aaPredicted RBP18.3■□□□□ 0.52
MAP1LC3B-208ENST00000570189 TAF12Q16514 161 aa18.3■□□□□ 0.52
MAP1LC3B-208ENST00000570189 VSTM1Q6UX27 236 aa18.3■□□□□ 0.52
MAP1LC3B-208ENST00000570189 C4orf50Q6ZRC1 276 aa18.3■□□□□ 0.52
MAP1LC3B-208ENST00000570189 YAF2Q8IY57 180 aa18.3■□□□□ 0.52
MAP1LC3B-208ENST00000570189 GRAMD1CQ8IYS0 662 aa18.3■□□□□ 0.52
MAP1LC3B-208ENST00000570189 CMTM8Q8IZV2 173 aa18.3■□□□□ 0.52
MAP1LC3B-208ENST00000570189 CELF5Q8N6W0 485 aaKnown RBP18.3■□□□□ 0.52
MAP1LC3B-208ENST00000570189 LRRC3BQ96PB8 259 aa18.3■□□□□ 0.52
MAP1LC3B-208ENST00000570189 PI4K2AQ9BTU6 479 aa18.3■□□□□ 0.52
MAP1LC3B-208ENST00000570189 SLC46A2Q9BY10 475 aa18.3■□□□□ 0.52
MAP1LC3B-208ENST00000570189 CHRDQ9H2X0 955 aa18.3■□□□□ 0.52
MAP1LC3B-208ENST00000570189 KCTD10Q9H3F6 313 aa18.3■□□□□ 0.52
MAP1LC3B-208ENST00000570189 KIF9Q9HAQ2 790 aa18.3■□□□□ 0.52
MAP1LC3B-208ENST00000570189 PRMT8Q9NR22 394 aaPredicted RBP18.3■□□□□ 0.52
MAP1LC3B-208ENST00000570189 EXOC1Q9NV70 894 aa18.3■□□□□ 0.52
MAP1LC3B-208ENST00000570189 GTF3C4Q9UKN8 822 aa18.3■□□□□ 0.52
MAP1LC3B-208ENST00000570189 ZNF292O60281 2723 aa18.29■□□□□ 0.52
MAP1LC3B-208ENST00000570189 MYBPHLA2RUH7 354 aa18.29■□□□□ 0.52
MAP1LC3B-208ENST00000570189 DPYSL4O14531 572 aa18.29■□□□□ 0.52
MAP1LC3B-208ENST00000570189 PRAMEF12O95522 483 aa18.29■□□□□ 0.52
MAP1LC3B-208ENST00000570189 DLATP10515 647 aaKnown RBP18.29■□□□□ 0.52
MAP1LC3B-208ENST00000570189 ACAT1P24752 427 aaKnown RBP18.29■□□□□ 0.52
MAP1LC3B-208ENST00000570189 CYP2F1P24903 491 aa18.29■□□□□ 0.52
MAP1LC3B-208ENST00000570189 CYP4F8P98187 520 aa18.29■□□□□ 0.52
MAP1LC3B-208ENST00000570189 KMT5BQ4FZB7 885 aa18.29■□□□□ 0.52
MAP1LC3B-208ENST00000570189 SPATA2LQ8IUW3 424 aaPredicted RBP18.29■□□□□ 0.52
MAP1LC3B-208ENST00000570189 RDH13Q8NBN7 331 aa18.29■□□□□ 0.52
MAP1LC3B-208ENST00000570189 BPIFB1Q8TDL5 484 aa18.29■□□□□ 0.52
MAP1LC3B-208ENST00000570189 PARD3BQ8TEW8 1205 aa18.29■□□□□ 0.52
MAP1LC3B-208ENST00000570189 GIPC2Q8TF65 315 aa18.29■□□□□ 0.52
MAP1LC3B-208ENST00000570189 FAM3CQ92520 227 aa18.29■□□□□ 0.52
MAP1LC3B-208ENST00000570189 ZNF516Q92618 1163 aa18.29■□□□□ 0.52
MAP1LC3B-208ENST00000570189 SPATA17Q96L03 361 aa18.29■□□□□ 0.52
MAP1LC3B-208ENST00000570189 SYT15Q9BQS2 421 aa18.29■□□□□ 0.52
MAP1LC3B-208ENST00000570189 XYLT2Q9H1B5 865 aa18.29■□□□□ 0.52
MAP1LC3B-208ENST00000570189 GVINP1Q7Z2Y8 2422 aa18.29■□□□□ 0.52
MAP1LC3B-208ENST00000570189 LAMTOR5O43504 91 aa18.28■□□□□ 0.52
MAP1LC3B-208ENST00000570189 EXOC3O60645 756 aa18.28■□□□□ 0.52
MAP1LC3B-208ENST00000570189 TADA3O75528 432 aa18.28■□□□□ 0.52
MAP1LC3B-208ENST00000570189 CST3P01034 146 aaPredicted RBP18.28■□□□□ 0.52
MAP1LC3B-208ENST00000570189 NFIL3Q16649 462 aa18.28■□□□□ 0.52
MAP1LC3B-208ENST00000570189 MON1AQ86VX9 555 aa18.28■□□□□ 0.52
MAP1LC3B-208ENST00000570189 RALGPS2Q86X27 583 aaPredicted RBP18.28■□□□□ 0.52
MAP1LC3B-208ENST00000570189 MYCBPAPQ8TBZ2 947 aa18.28■□□□□ 0.52
MAP1LC3B-208ENST00000570189 CSGALNACT1Q8TDX6 532 aa18.28■□□□□ 0.52
MAP1LC3B-208ENST00000570189 FAM126AQ9BYI3 521 aaPredicted RBP18.28■□□□□ 0.52
MAP1LC3B-208ENST00000570189 CRTAC1Q9NQ79 661 aa18.28■□□□□ 0.52
MAP1LC3B-208ENST00000570189 SPATA6Q9NWH7 488 aaPredicted RBP18.28■□□□□ 0.52
MAP1LC3B-208ENST00000570189 PCDHGA2Q9Y5H1 932 aa18.28■□□□□ 0.52
MAP1LC3B-208ENST00000570189 OTOGLQ3ZCN5 2332 aa18.27■□□□□ 0.52
MAP1LC3B-208ENST00000570189 MAPK13O15264 365 aa18.27■□□□□ 0.52
MAP1LC3B-208ENST00000570189 RHOBTB3O94955 611 aa18.27■□□□□ 0.52
MAP1LC3B-208ENST00000570189 KIF20AO95235 890 aa18.27■□□□□ 0.52
MAP1LC3B-208ENST00000570189 PFKLP17858 780 aa18.27■□□□□ 0.52
MAP1LC3B-208ENST00000570189 LMO2P25791 158 aa18.27■□□□□ 0.52
MAP1LC3B-208ENST00000570189 SYKP43405 635 aa18.27■□□□□ 0.52
MAP1LC3B-208ENST00000570189 GPR15P49685 360 aa18.27■□□□□ 0.52
MAP1LC3B-208ENST00000570189 ENPEPQ07075 957 aa18.27■□□□□ 0.52
MAP1LC3B-208ENST00000570189 ZBTB44Q8NCP5 570 aa18.27■□□□□ 0.52
MAP1LC3B-208ENST00000570189 PLEKHO2Q8TD55 490 aa18.27■□□□□ 0.52
MAP1LC3B-208ENST00000570189 MRPS31Q92665 395 aaKnown RBP18.27■□□□□ 0.52
MAP1LC3B-208ENST00000570189 SYAP1Q96A49 352 aaPredicted RBP18.27■□□□□ 0.52
MAP1LC3B-208ENST00000570189 CCDC127Q96BQ5 260 aa18.27■□□□□ 0.52
MAP1LC3B-208ENST00000570189 THG1LQ9NWX6 298 aaKnown RBP18.27■□□□□ 0.52
MAP1LC3B-208ENST00000570189 MAGEC2Q9UBF1 373 aaPredicted RBP18.27■□□□□ 0.52
MAP1LC3B-208ENST00000570189 TRAF3IP3Q9Y228 551 aa18.27■□□□□ 0.52
MAP1LC3B-208ENST00000570189 FRYLO94915 3013 aa18.27■□□□□ 0.51
MAP1LC3B-208ENST00000570189 WDR87Q6ZQQ6 2873 aa18.27■□□□□ 0.51
MAP1LC3B-208ENST00000570189 SLC38A8A6NNN8 435 aa18.26■□□□□ 0.51
MAP1LC3B-208ENST00000570189 HCRTO43612 131 aa18.26■□□□□ 0.51
MAP1LC3B-208ENST00000570189 LMNAP02545 664 aaKnown RBP18.26■□□□□ 0.51
MAP1LC3B-208ENST00000570189 CHRNB1P11230 501 aa18.26■□□□□ 0.51
MAP1LC3B-208ENST00000570189 TCF3P15923 654 aa18.26■□□□□ 0.51
MAP1LC3B-208ENST00000570189 CTHP32929 405 aa18.26■□□□□ 0.51
MAP1LC3B-208ENST00000570189 AVPR1AP37288 418 aa18.26■□□□□ 0.51
MAP1LC3B-208ENST00000570189 NDUFA8P51970 172 aa18.26■□□□□ 0.51
MAP1LC3B-208ENST00000570189 MCCD1P59942 119 aaPredicted RBP18.26■□□□□ 0.51
MAP1LC3B-208ENST00000570189 DDR2Q16832 855 aa18.26■□□□□ 0.51
MAP1LC3B-208ENST00000570189 CCDC142Q17RM4 750 aa18.26■□□□□ 0.51
MAP1LC3B-208ENST00000570189 WDR72Q3MJ13 1102 aa18.26■□□□□ 0.51
MAP1LC3B-208ENST00000570189 TMC2Q8TDI7 906 aa18.26■□□□□ 0.51
MAP1LC3B-208ENST00000570189 MMS19Q96T76 1030 aa18.26■□□□□ 0.51
MAP1LC3B-208ENST00000570189 FAM83CQ9BQN1 747 aa18.26■□□□□ 0.51
MAP1LC3B-208ENST00000570189 TTLL2Q9BWV7 592 aa18.26■□□□□ 0.51
MAP1LC3B-208ENST00000570189 TDP1Q9NUW8 608 aa18.26■□□□□ 0.51
MAP1LC3B-208ENST00000570189 LRRIQ3A6PVS8 624 aaPredicted RBP18.25■□□□□ 0.51
MAP1LC3B-208ENST00000570189 SPECC1L-ADORA2AF8WAN1 911 aa18.25■□□□□ 0.51
MAP1LC3B-208ENST00000570189 IKBKBO14920 756 aa18.25■□□□□ 0.51
MAP1LC3B-208ENST00000570189 TRIM66O15016 1216 aa18.25■□□□□ 0.51
MAP1LC3B-208ENST00000570189 ATP2C2O75185 946 aa18.25■□□□□ 0.51
MAP1LC3B-208ENST00000570189 PAPSS2O95340 614 aaPredicted RBP18.25■□□□□ 0.51
MAP1LC3B-208ENST00000570189 C4BPAP04003 597 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms