RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 GJA1P17302 382 aa13.64□□□□□ -0.23
CDT1-203ENST00000569140 CEBPBP17676 345 aa13.64□□□□□ -0.23
CDT1-203ENST00000569140 YWHAEP62258 255 aaKnown RBP13.64□□□□□ -0.23
CDT1-203ENST00000569140 SLC5A9Q2M3M2 681 aa13.64□□□□□ -0.23
CDT1-203ENST00000569140 CT47A1Q5JQC4 288 aaPredicted RBP13.64□□□□□ -0.23
CDT1-203ENST00000569140 DNAJB7Q7Z6W7 309 aaPredicted RBP13.64□□□□□ -0.23
CDT1-203ENST00000569140 UNC93AQ86WB7 457 aa13.64□□□□□ -0.23
CDT1-203ENST00000569140 RNF135Q8IUD6 432 aa13.64□□□□□ -0.23
CDT1-203ENST00000569140 TCEAL4Q96EI5 215 aa13.64□□□□□ -0.23
CDT1-203ENST00000569140 FUBP3Q96I24 572 aaKnown RBP eCLIP13.64□□□□□ -0.23
CDT1-203ENST00000569140 MYADMQ96S97 322 aa13.64□□□□□ -0.23
CDT1-203ENST00000569140 CRACR2AQ9BSW2 395 aa13.64□□□□□ -0.23
CDT1-203ENST00000569140 NT5C1AQ9BXI3 368 aa13.64□□□□□ -0.23
CDT1-203ENST00000569140 ZNF518BQ9C0D4 1074 aa13.64□□□□□ -0.23
CDT1-203ENST00000569140 NAT10Q9H0A0 1025 aaKnown RBP13.64□□□□□ -0.23
CDT1-203ENST00000569140 INTS2Q9H0H0 1204 aaKnown RBP13.64□□□□□ -0.23
CDT1-203ENST00000569140 ABCB6Q9NP58 842 aa13.64□□□□□ -0.23
CDT1-203ENST00000569140 SAMSN1Q9NSI8 373 aaKnown RBP13.64□□□□□ -0.23
CDT1-203ENST00000569140 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.64□□□□□ -0.23
CDT1-203ENST00000569140 LIMD1Q9UGP4 676 aa13.64□□□□□ -0.23
CDT1-203ENST00000569140 USTQ9Y2C2 406 aa13.64□□□□□ -0.23
CDT1-203ENST00000569140 ASB3Q9Y575 518 aa13.64□□□□□ -0.23
CDT1-203ENST00000569140 A0A1W2PRU2 124 aa13.63□□□□□ -0.23
CDT1-203ENST00000569140 SYCE3A1L190 88 aa13.63□□□□□ -0.23
CDT1-203ENST00000569140 C19orf67A6NJJ6 358 aa13.63□□□□□ -0.23
CDT1-203ENST00000569140 P4HA2O15460 535 aa13.63□□□□□ -0.23
CDT1-203ENST00000569140 ASGR2P07307 311 aa13.63□□□□□ -0.23
CDT1-203ENST00000569140 TPM2P07951 284 aa13.63□□□□□ -0.23
CDT1-203ENST00000569140 CCDC130P13994 396 aa13.63□□□□□ -0.23
CDT1-203ENST00000569140 TBXAS1P24557 533 aaPredicted RBP13.63□□□□□ -0.23
CDT1-203ENST00000569140 ADORA2BP29275 332 aa13.63□□□□□ -0.23
CDT1-203ENST00000569140 MCCD1P59942 119 aaPredicted RBP13.63□□□□□ -0.23
CDT1-203ENST00000569140 IFRD2Q12894 506 aaPredicted RBP13.63□□□□□ -0.23
CDT1-203ENST00000569140 CUL2Q13617 745 aa13.63□□□□□ -0.23
CDT1-203ENST00000569140 MAN2A1Q16706 1144 aa13.63□□□□□ -0.23
CDT1-203ENST00000569140 CFAP221Q4G0U5 840 aa13.63□□□□□ -0.23
CDT1-203ENST00000569140 ANO6Q4KMQ2 910 aa13.63□□□□□ -0.23
CDT1-203ENST00000569140 FAM35AQ86V20 835 aa13.63□□□□□ -0.23
CDT1-203ENST00000569140 AOPEPQ8N6M6 819 aa13.63□□□□□ -0.23
CDT1-203ENST00000569140 LEMD2Q8NC56 503 aa13.63□□□□□ -0.23
CDT1-203ENST00000569140 ENOX1Q8TC92 643 aaKnown RBP13.63□□□□□ -0.23
CDT1-203ENST00000569140 FGF13Q92913 245 aa13.63□□□□□ -0.23
CDT1-203ENST00000569140 PSMG2Q969U7 264 aa13.63□□□□□ -0.23
CDT1-203ENST00000569140 MCRS1Q96EZ8 462 aa13.63□□□□□ -0.23
CDT1-203ENST00000569140 TWNKQ96RR1 684 aa13.63□□□□□ -0.23
CDT1-203ENST00000569140 TUBGCP2Q9BSJ2 902 aa13.63□□□□□ -0.23
CDT1-203ENST00000569140 B3GNT5Q9BYG0 378 aa13.63□□□□□ -0.23
CDT1-203ENST00000569140 ELOVL4Q9GZR5 314 aa13.63□□□□□ -0.23
CDT1-203ENST00000569140 ATXN3LQ9H3M9 355 aa13.63□□□□□ -0.23
CDT1-203ENST00000569140 ZNF334Q9HCZ1 680 aaPredicted RBP13.63□□□□□ -0.23
CDT1-203ENST00000569140 KRT82Q9NSB4 513 aa13.63□□□□□ -0.23
CDT1-203ENST00000569140 CISHQ9NSE2 258 aa13.63□□□□□ -0.23
CDT1-203ENST00000569140 TAB2Q9NYJ8 693 aa13.63□□□□□ -0.23
CDT1-203ENST00000569140 MUTYHQ9UIF7 546 aa13.63□□□□□ -0.23
CDT1-203ENST00000569140 CDH7Q9ULB5 785 aa13.63□□□□□ -0.23
CDT1-203ENST00000569140 COQ4Q9Y3A0 265 aa13.63□□□□□ -0.23
CDT1-203ENST00000569140 SLC38A8A6NNN8 435 aa13.62□□□□□ -0.23
CDT1-203ENST00000569140 TRIM66O15016 1216 aa13.62□□□□□ -0.23
CDT1-203ENST00000569140 CILPO75339 1184 aa13.62□□□□□ -0.23
CDT1-203ENST00000569140 LETM1O95202 739 aaPredicted RBP13.62□□□□□ -0.23
CDT1-203ENST00000569140 PAPLNO95428 1278 aa13.62□□□□□ -0.23
CDT1-203ENST00000569140 CSH1P0DML2 217 aa13.62□□□□□ -0.23
CDT1-203ENST00000569140 CSH2P0DML3 217 aa13.62□□□□□ -0.23
CDT1-203ENST00000569140 GABRR2P28476 465 aa13.62□□□□□ -0.23
CDT1-203ENST00000569140 MYL5Q02045 173 aa13.62□□□□□ -0.23
CDT1-203ENST00000569140 INCA1Q0VD86 236 aa13.62□□□□□ -0.23
CDT1-203ENST00000569140 MTMR3Q13615 1198 aa13.62□□□□□ -0.23
CDT1-203ENST00000569140 TEAD2Q15562 447 aa13.62□□□□□ -0.23
CDT1-203ENST00000569140 SKOR2Q2VWA4 1001 aaPredicted RBP13.62□□□□□ -0.23
CDT1-203ENST00000569140 GBP6Q6ZN66 633 aa13.62□□□□□ -0.23
CDT1-203ENST00000569140 RRAGAQ7L523 313 aa13.62□□□□□ -0.23
CDT1-203ENST00000569140 IRF2BP1Q8IU81 584 aa13.62□□□□□ -0.23
CDT1-203ENST00000569140 NPAS3Q8IXF0 933 aa13.62□□□□□ -0.23
CDT1-203ENST00000569140 ZDHHC14Q8IZN3 488 aa13.62□□□□□ -0.23
CDT1-203ENST00000569140 TTC39CQ8N584 583 aa13.62□□□□□ -0.23
CDT1-203ENST00000569140 SLC2A14Q8TDB8 520 aa13.62□□□□□ -0.23
CDT1-203ENST00000569140 JAKMIP2Q96AA8 810 aa13.62□□□□□ -0.23
CDT1-203ENST00000569140 HEXIM2Q96MH2 286 aaKnown RBP13.62□□□□□ -0.23
CDT1-203ENST00000569140 FANCLQ9NW38 375 aa13.62□□□□□ -0.23
CDT1-203ENST00000569140 PCDHB4Q9Y5E5 795 aa13.62□□□□□ -0.23
CDT1-203ENST00000569140 F8VP50 259 aa13.61□□□□□ -0.23
CDT1-203ENST00000569140 AP1G2O75843 785 aa13.61□□□□□ -0.23
CDT1-203ENST00000569140 FGF19O95750 216 aa13.61□□□□□ -0.23
CDT1-203ENST00000569140 LAMP2P13473 410 aa13.61□□□□□ -0.23
CDT1-203ENST00000569140 CD19P15391 556 aa13.61□□□□□ -0.23
CDT1-203ENST00000569140 CDK11BP21127 795 aaKnown RBP13.61□□□□□ -0.23
CDT1-203ENST00000569140 EEF1GP26641 437 aaKnown RBP13.61□□□□□ -0.23
CDT1-203ENST00000569140 CCR2P41597 374 aa13.61□□□□□ -0.23
CDT1-203ENST00000569140 MAGEA11P43364 429 aa13.61□□□□□ -0.23
CDT1-203ENST00000569140 CYP4F8P98187 520 aa13.61□□□□□ -0.23
CDT1-203ENST00000569140 VWA3BQ502W6 1294 aa13.61□□□□□ -0.23
CDT1-203ENST00000569140 ARHGAP15Q53QZ3 475 aa13.61□□□□□ -0.23
CDT1-203ENST00000569140 TCP11X2Q5H9J9 407 aa13.61□□□□□ -0.23
CDT1-203ENST00000569140 PRSS36Q5K4E3 855 aa13.61□□□□□ -0.23
CDT1-203ENST00000569140 VSTM1Q6UX27 236 aa13.61□□□□□ -0.23
CDT1-203ENST00000569140 ARHGEF19Q8IW93 802 aa13.61□□□□□ -0.23
CDT1-203ENST00000569140 C12orf29Q8N999 325 aa13.61□□□□□ -0.23
CDT1-203ENST00000569140 EHBP1Q8NDI1 1231 aa13.61□□□□□ -0.23
CDT1-203ENST00000569140 ANKRD20A12PQ8NF67 263 aa13.61□□□□□ -0.23
CDT1-203ENST00000569140 SHKBP1Q8TBC3 707 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms