RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 PARD3BQ8TEW8 1205 aa8.38□□□□□ -1.07
CDH3-209ENST00000569080 ATOH1Q92858 354 aaPredicted RBP8.38□□□□□ -1.07
CDH3-209ENST00000569080 IRF7Q92985 503 aa8.38□□□□□ -1.07
CDH3-209ENST00000569080 MYLPFQ96A32 169 aa8.38□□□□□ -1.07
CDH3-209ENST00000569080 CLDN23Q96B33 292 aa8.38□□□□□ -1.07
CDH3-209ENST00000569080 TRMT2BQ96GJ1 504 aaKnown RBP8.38□□□□□ -1.07
CDH3-209ENST00000569080 SHDQ96IW2 340 aa8.38□□□□□ -1.07
CDH3-209ENST00000569080 MYRFLQ96LU7 910 aa8.38□□□□□ -1.07
CDH3-209ENST00000569080 SYT15Q9BQS2 421 aa8.38□□□□□ -1.07
CDH3-209ENST00000569080 TRMT61BQ9BVS5 477 aaKnown RBP8.38□□□□□ -1.07
CDH3-209ENST00000569080 SLC46A2Q9BY10 475 aa8.38□□□□□ -1.07
CDH3-209ENST00000569080 ATXN3LQ9H3M9 355 aa8.38□□□□□ -1.07
CDH3-209ENST00000569080 SLITRK6Q9H5Y7 841 aa8.38□□□□□ -1.07
CDH3-209ENST00000569080 TASP1Q9H6P5 420 aa8.38□□□□□ -1.07
CDH3-209ENST00000569080 BRD9Q9H8M2 597 aa8.38□□□□□ -1.07
CDH3-209ENST00000569080 TMEM30AQ9NV96 361 aa8.38□□□□□ -1.07
CDH3-209ENST00000569080 OBP2AQ9NY56 170 aa8.38□□□□□ -1.07
CDH3-209ENST00000569080 CDH9Q9ULB4 789 aa8.38□□□□□ -1.07
CDH3-209ENST00000569080 TRAF3IP3Q9Y228 551 aa8.38□□□□□ -1.07
CDH3-209ENST00000569080 ATP6V1DQ9Y5K8 247 aa8.38□□□□□ -1.07
CDH3-209ENST00000569080 ZNF638Q14966 1978 aaKnown RBP8.38□□□□□ -1.07
CDH3-209ENST00000569080 RIF1Q5UIP0 2472 aaKnown RBP8.38□□□□□ -1.07
CDH3-209ENST00000569080 FAM186AA6NE01 2351 aa8.37□□□□□ -1.07
CDH3-209ENST00000569080 OTOGLQ3ZCN5 2332 aa8.37□□□□□ -1.07
CDH3-209ENST00000569080 DNAH14Q0VDD8 3507 aa8.37□□□□□ -1.07
CDH3-209ENST00000569080 PRR23AA6NEV1 266 aa8.37□□□□□ -1.07
CDH3-209ENST00000569080 PDXKO00764 312 aa8.37□□□□□ -1.07
CDH3-209ENST00000569080 GFRA3O60609 400 aa8.37□□□□□ -1.07
CDH3-209ENST00000569080 C4BPAP04003 597 aaKnown RBP8.37□□□□□ -1.07
CDH3-209ENST00000569080 RFX1P22670 979 aa8.37□□□□□ -1.07
CDH3-209ENST00000569080 RPS9P46781 194 aaKnown RBP8.37□□□□□ -1.07
CDH3-209ENST00000569080 CACNA2D1P54289 1103 aa8.37□□□□□ -1.07
CDH3-209ENST00000569080 KCNB1Q14721 858 aa8.37□□□□□ -1.07
CDH3-209ENST00000569080 UBXN2BQ14CS0 331 aa8.37□□□□□ -1.07
CDH3-209ENST00000569080 NFIL3Q16649 462 aa8.37□□□□□ -1.07
CDH3-209ENST00000569080 DDR2Q16832 855 aa8.37□□□□□ -1.07
CDH3-209ENST00000569080 ZACNQ401N2 412 aa8.37□□□□□ -1.07
CDH3-209ENST00000569080 FRMD5Q7Z6J6 570 aa8.37□□□□□ -1.07
CDH3-209ENST00000569080 C1orf210Q8IVY1 113 aa8.37□□□□□ -1.07
CDH3-209ENST00000569080 FMR1NBQ8N0W7 255 aaPredicted RBP8.37□□□□□ -1.07
CDH3-209ENST00000569080 FAM200AQ8TCP9 573 aa8.37□□□□□ -1.07
CDH3-209ENST00000569080 USP13Q92995 863 aaPredicted RBP8.37□□□□□ -1.07
CDH3-209ENST00000569080 E2F7Q96AV8 911 aa8.37□□□□□ -1.07
CDH3-209ENST00000569080 CHFRQ96EP1 664 aa8.37□□□□□ -1.07
CDH3-209ENST00000569080 PCED1BQ96HM7 432 aa8.37□□□□□ -1.07
CDH3-209ENST00000569080 ZFYVE19Q96K21 471 aa8.37□□□□□ -1.07
CDH3-209ENST00000569080 FNBP1Q96RU3 617 aa8.37□□□□□ -1.07
CDH3-209ENST00000569080 SMG9Q9H0W8 520 aaKnown RBP8.37□□□□□ -1.07
CDH3-209ENST00000569080 SDCBP2Q9H190 292 aa8.37□□□□□ -1.07
CDH3-209ENST00000569080 DPEP3Q9H4B8 488 aa8.37□□□□□ -1.07
CDH3-209ENST00000569080 SMYD3Q9H7B4 428 aa8.37□□□□□ -1.07
CDH3-209ENST00000569080 PRMT8Q9NR22 394 aaPredicted RBP8.37□□□□□ -1.07
CDH3-209ENST00000569080 CCL26Q9Y258 94 aa8.37□□□□□ -1.07
CDH3-209ENST00000569080 PIAS3Q9Y6X2 628 aa8.37□□□□□ -1.07
CDH3-209ENST00000569080 GPR179Q6PRD1 2367 aa8.36□□□□□ -1.07
CDH3-209ENST00000569080 KIAA1549LQ6ZVL6 1849 aa8.36□□□□□ -1.07
CDH3-209ENST00000569080 FAM170BA6NMN3 283 aa8.36□□□□□ -1.07
CDH3-209ENST00000569080 SLC38A8A6NNN8 435 aa8.36□□□□□ -1.07
CDH3-209ENST00000569080 TULP1O00294 542 aaPredicted RBP8.36□□□□□ -1.07
CDH3-209ENST00000569080 STK25O00506 426 aa8.36□□□□□ -1.07
CDH3-209ENST00000569080 ZNF263O14978 683 aa8.36□□□□□ -1.07
CDH3-209ENST00000569080 MAPK13O15264 365 aa8.36□□□□□ -1.07
CDH3-209ENST00000569080 CHADO15335 359 aa8.36□□□□□ -1.07
CDH3-209ENST00000569080 AKAP3O75969 853 aa8.36□□□□□ -1.07
CDH3-209ENST00000569080 ZNF202O95125 648 aa8.36□□□□□ -1.07
CDH3-209ENST00000569080 FAM163BP0C2L3 166 aa8.36□□□□□ -1.07
CDH3-209ENST00000569080 SP9P0CG40 484 aa8.36□□□□□ -1.07
CDH3-209ENST00000569080 CSH1P0DML2 217 aa8.36□□□□□ -1.07
CDH3-209ENST00000569080 CSH2P0DML3 217 aa8.36□□□□□ -1.07
CDH3-209ENST00000569080 TDGF1P13385 188 aa8.36□□□□□ -1.07
CDH3-209ENST00000569080 DDX6P26196 483 aaKnown RBP eCLIP8.36□□□□□ -1.07
CDH3-209ENST00000569080 ATICP31939 592 aa8.36□□□□□ -1.07
CDH3-209ENST00000569080 CTHP32929 405 aa8.36□□□□□ -1.07
CDH3-209ENST00000569080 MAGEA9P43362 315 aa8.36□□□□□ -1.07
CDH3-209ENST00000569080 SOX9P48436 509 aa8.36□□□□□ -1.07
CDH3-209ENST00000569080 MLLT6P55198 1093 aaPredicted RBP8.36□□□□□ -1.07
CDH3-209ENST00000569080 MCCD1P59942 119 aaPredicted RBP8.36□□□□□ -1.07
CDH3-209ENST00000569080 USP46P62068 366 aa8.36□□□□□ -1.07
CDH3-209ENST00000569080 RPL10AP62906 217 aaKnown RBP8.36□□□□□ -1.07
CDH3-209ENST00000569080 USP4Q13107 963 aa8.36□□□□□ -1.07
CDH3-209ENST00000569080 NCOA4Q13772 614 aa8.36□□□□□ -1.07
CDH3-209ENST00000569080 WDR72Q3MJ13 1102 aa8.36□□□□□ -1.07
CDH3-209ENST00000569080 ARHGAP15Q53QZ3 475 aa8.36□□□□□ -1.07
CDH3-209ENST00000569080 TXNDC8Q6A555 127 aa8.36□□□□□ -1.07
CDH3-209ENST00000569080 TXNDC11Q6PKC3 985 aa8.36□□□□□ -1.07
CDH3-209ENST00000569080 VSTM1Q6UX27 236 aa8.36□□□□□ -1.07
CDH3-209ENST00000569080 ZNF852Q6ZMS4 543 aa8.36□□□□□ -1.07
CDH3-209ENST00000569080 SPATA2LQ8IUW3 424 aaPredicted RBP8.36□□□□□ -1.07
CDH3-209ENST00000569080 GPIHBP1Q8IV16 184 aa8.36□□□□□ -1.07
CDH3-209ENST00000569080 CMTM8Q8IZV2 173 aa8.36□□□□□ -1.07
CDH3-209ENST00000569080 GUF1Q8N442 669 aaKnown RBP8.36□□□□□ -1.07
CDH3-209ENST00000569080 ENGASEQ8NFI3 743 aa8.36□□□□□ -1.07
CDH3-209ENST00000569080 MYCBPAPQ8TBZ2 947 aa8.36□□□□□ -1.07
CDH3-209ENST00000569080 TMC2Q8TDI7 906 aa8.36□□□□□ -1.07
CDH3-209ENST00000569080 BPIFB1Q8TDL5 484 aa8.36□□□□□ -1.07
CDH3-209ENST00000569080 NELL1Q92832 810 aa8.36□□□□□ -1.07
CDH3-209ENST00000569080 SYAP1Q96A49 352 aaPredicted RBP8.36□□□□□ -1.07
CDH3-209ENST00000569080 ELMO3Q96BJ8 720 aa8.36□□□□□ -1.07
CDH3-209ENST00000569080 SPATA17Q96L03 361 aa8.36□□□□□ -1.07
CDH3-209ENST00000569080 GCNAQ96QF7 691 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms