RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 RPL10AP62906 217 aaKnown RBP5.13□□□□□ -1.59
CLK3-219ENST00000567805 FCHO2Q0JRZ9 810 aa5.13□□□□□ -1.59
CLK3-219ENST00000567805 STK4Q13043 487 aa5.13□□□□□ -1.59
CLK3-219ENST00000567805 GRM2Q14416 872 aa5.13□□□□□ -1.59
CLK3-219ENST00000567805 BECN1Q14457 450 aa5.13□□□□□ -1.59
CLK3-219ENST00000567805 UBXN2BQ14CS0 331 aa5.13□□□□□ -1.59
CLK3-219ENST00000567805 PSMD6Q15008 389 aa5.13□□□□□ -1.59
CLK3-219ENST00000567805 MAPRE1Q15691 268 aaKnown RBP5.13□□□□□ -1.59
CLK3-219ENST00000567805 TAF12Q16514 161 aa5.13□□□□□ -1.59
CLK3-219ENST00000567805 SOWAHAQ2M3V2 549 aa5.13□□□□□ -1.59
CLK3-219ENST00000567805 KMT5BQ4FZB7 885 aa5.13□□□□□ -1.59
CLK3-219ENST00000567805 CFAP221Q4G0U5 840 aa5.13□□□□□ -1.59
CLK3-219ENST00000567805 INTS6LQ5JSJ4 861 aaKnown RBP5.13□□□□□ -1.59
CLK3-219ENST00000567805 STXBP5Q5T5C0 1151 aa5.13□□□□□ -1.59
CLK3-219ENST00000567805 GPR158Q5T848 1215 aa5.13□□□□□ -1.59
CLK3-219ENST00000567805 LMBRD2Q68DH5 695 aaPredicted RBP5.13□□□□□ -1.59
CLK3-219ENST00000567805 SCARA3Q6AZY7 606 aa5.13□□□□□ -1.59
CLK3-219ENST00000567805 C1orf228Q6PIY5 440 aa5.13□□□□□ -1.59
CLK3-219ENST00000567805 TPRG1Q6ZUI0 275 aa5.13□□□□□ -1.59
CLK3-219ENST00000567805 TRAPPC11Q7Z392 1133 aa5.13□□□□□ -1.59
CLK3-219ENST00000567805 LIMS2Q7Z4I7 341 aa5.13□□□□□ -1.59
CLK3-219ENST00000567805 SPATA2LQ8IUW3 424 aaPredicted RBP5.13□□□□□ -1.59
CLK3-219ENST00000567805 SLC9A9Q8IVB4 645 aa5.13□□□□□ -1.59
CLK3-219ENST00000567805 ARID3BQ8IVW6 561 aaPredicted RBP5.13□□□□□ -1.59
CLK3-219ENST00000567805 C1orf210Q8IVY1 113 aa5.13□□□□□ -1.59
CLK3-219ENST00000567805 GRAMD1CQ8IYS0 662 aa5.13□□□□□ -1.59
CLK3-219ENST00000567805 KIAA0895Q8NCT3 520 aa5.13□□□□□ -1.59
CLK3-219ENST00000567805 CCDC47Q96A33 483 aaKnown RBP5.13□□□□□ -1.59
CLK3-219ENST00000567805 CCDC127Q96BQ5 260 aa5.13□□□□□ -1.59
CLK3-219ENST00000567805 MSANTD3Q96H12 275 aa5.13□□□□□ -1.59
CLK3-219ENST00000567805 FUBP3Q96I24 572 aaKnown RBP eCLIP5.13□□□□□ -1.59
CLK3-219ENST00000567805 FAM84AQ96KN4 292 aa5.13□□□□□ -1.59
CLK3-219ENST00000567805 CEP295NLQ96MC4 621 aa5.13□□□□□ -1.59
CLK3-219ENST00000567805 PKMYT1Q99640 499 aa5.13□□□□□ -1.59
CLK3-219ENST00000567805 LPIN3Q9BQK8 851 aa5.13□□□□□ -1.59
CLK3-219ENST00000567805 MKNK1Q9BUB5 465 aa5.13□□□□□ -1.59
CLK3-219ENST00000567805 BCO2Q9BYV7 579 aa5.13□□□□□ -1.59
CLK3-219ENST00000567805 ATXN3LQ9H3M9 355 aa5.13□□□□□ -1.59
CLK3-219ENST00000567805 TASP1Q9H6P5 420 aa5.13□□□□□ -1.59
CLK3-219ENST00000567805 IL21Q9HBE4 155 aa5.13□□□□□ -1.59
CLK3-219ENST00000567805 ZNF334Q9HCZ1 680 aaPredicted RBP5.13□□□□□ -1.59
CLK3-219ENST00000567805 LTB4R2Q9NPC1 389 aa5.13□□□□□ -1.59
CLK3-219ENST00000567805 HEBP1Q9NRV9 189 aa5.13□□□□□ -1.59
CLK3-219ENST00000567805 TMLHEQ9NVH6 421 aa5.13□□□□□ -1.59
CLK3-219ENST00000567805 OBP2AQ9NY56 170 aa5.13□□□□□ -1.59
CLK3-219ENST00000567805 UXTQ9UBK9 157 aaPredicted RBP5.13□□□□□ -1.59
CLK3-219ENST00000567805 GTF3C4Q9UKN8 822 aa5.13□□□□□ -1.59
CLK3-219ENST00000567805 CDH9Q9ULB4 789 aa5.13□□□□□ -1.59
CLK3-219ENST00000567805 MRPS17Q9Y2R5 130 aaKnown RBP5.13□□□□□ -1.59
CLK3-219ENST00000567805 DNAH14Q0VDD8 3507 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 KIAA1549LQ6ZVL6 1849 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 MYO16Q9Y6X6 1858 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 MYBPHLA2RUH7 354 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 PRR23AA6NEV1 266 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 SOBPA7XYQ1 873 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 ARNTLO00327 626 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 MAN2B1O00754 1011 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 PDXKO00764 312 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 DPYSL4O14531 572 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 CHADO15335 359 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 GFRA3O60609 400 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 TACC1O75410 805 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 NOL4O94818 638 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 RHOBTB3O94955 611 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 STAU1O95793 577 aaKnown RBP5.12□□□□□ -1.59
CLK3-219ENST00000567805 CST3P01034 146 aaPredicted RBP5.12□□□□□ -1.59
CLK3-219ENST00000567805 FAM163BP0C2L3 166 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 HMGA1P17096 107 aaKnown RBP5.12□□□□□ -1.59
CLK3-219ENST00000567805 CD72P21854 359 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 WARSP23381 471 aaKnown RBP5.12□□□□□ -1.59
CLK3-219ENST00000567805 CYP2F1P24903 491 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 LMO2P25791 158 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 ATICP31939 592 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 MAGEA11P43364 429 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 RPS9P46781 194 aaKnown RBP5.12□□□□□ -1.59
CLK3-219ENST00000567805 CDR1P51861 262 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 NDUFA8P51970 172 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 AP3M2P53677 418 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 NLRP12P59046 1061 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 TNNC1P63316 161 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 CLDN10P78369 228 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 CYP4F8P98187 520 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 DPYDQ12882 1025 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 TRPC3Q13507 836 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 ZNF528Q3MIS6 628 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 ARHGAP29Q52LW3 1261 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 FAM171BQ6P995 826 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 ZC3H14Q6PJT7 736 aaKnown RBP5.12□□□□□ -1.59
CLK3-219ENST00000567805 VSTM1Q6UX27 236 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 C4orf50Q6ZRC1 276 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 OSTM1Q86WC4 334 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 YAF2Q8IY57 180 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 FSIP1Q8NA03 581 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 BPIFB1Q8TDL5 484 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 CSGALNACT1Q8TDX6 532 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 PARD3BQ8TEW8 1205 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 GIPC2Q8TF65 315 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 KBTBD7Q8WVZ9 684 aa5.12□□□□□ -1.59
CLK3-219ENST00000567805 NKD2Q969F2 451 aaPredicted RBP5.12□□□□□ -1.59
CLK3-219ENST00000567805 SYAP1Q96A49 352 aaPredicted RBP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms