RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 AMOTQ4VCS5 1084 aa4.25□□□□□ -1.73
CDH1-211ENST00000567320 PXDC1Q5TGL8 231 aa4.25□□□□□ -1.73
CDH1-211ENST00000567320 PPP1R32Q7Z5V6 425 aa4.25□□□□□ -1.73
CDH1-211ENST00000567320 CHSY1Q86X52 802 aa4.25□□□□□ -1.73
CDH1-211ENST00000567320 FAM109AQ8N4B1 249 aa4.25□□□□□ -1.73
CDH1-211ENST00000567320 PRSS3P2Q8NHM4 247 aa4.25□□□□□ -1.73
CDH1-211ENST00000567320 CYP2W1Q8TAV3 490 aa4.25□□□□□ -1.73
CDH1-211ENST00000567320 R3HDM4Q96D70 268 aa4.25□□□□□ -1.73
CDH1-211ENST00000567320 ASB2Q96Q27 587 aa4.25□□□□□ -1.73
CDH1-211ENST00000567320 CAMKK2Q96RR4 588 aa4.25□□□□□ -1.73
CDH1-211ENST00000567320 MACROD1Q9BQ69 325 aa4.25□□□□□ -1.73
CDH1-211ENST00000567320 SPRTNQ9H040 489 aaPredicted RBP4.25□□□□□ -1.73
CDH1-211ENST00000567320 VPS16Q9H269 839 aa4.25□□□□□ -1.73
CDH1-211ENST00000567320 DUSP22Q9NRW4 184 aa4.25□□□□□ -1.73
CDH1-211ENST00000567320 SMIM35A0A1B0GVV1 85 aa4.24□□□□□ -1.73
CDH1-211ENST00000567320 EXOC3O60645 756 aa4.24□□□□□ -1.73
CDH1-211ENST00000567320 SNUPNO95149 360 aaKnown RBP4.24□□□□□ -1.73
CDH1-211ENST00000567320 ATXN1LP0C7T5 689 aaKnown RBP4.24□□□□□ -1.73
CDH1-211ENST00000567320 HOXB6P17509 224 aaKnown RBP4.24□□□□□ -1.73
CDH1-211ENST00000567320 CDKN1CP49918 316 aaPredicted RBP4.24□□□□□ -1.73
CDH1-211ENST00000567320 FXR1P51114 621 aaKnown RBP eCLIP4.24□□□□□ -1.73
CDH1-211ENST00000567320 HK3P52790 923 aa4.24□□□□□ -1.73
CDH1-211ENST00000567320 POLGP54098 1239 aaPredicted RBP4.24□□□□□ -1.73
CDH1-211ENST00000567320 TPTEP56180 551 aa4.24□□□□□ -1.73
CDH1-211ENST00000567320 LOXL3P58215 753 aa4.24□□□□□ -1.73
CDH1-211ENST00000567320 EVA1CP58658 441 aa4.24□□□□□ -1.73
CDH1-211ENST00000567320 GPSM2P81274 684 aa4.24□□□□□ -1.73
CDH1-211ENST00000567320 GTF2H3Q13889 308 aa4.24□□□□□ -1.73
CDH1-211ENST00000567320 E2F2Q14209 437 aa4.24□□□□□ -1.73
CDH1-211ENST00000567320 CERKLQ49MI3 558 aaPredicted RBP4.24□□□□□ -1.73
CDH1-211ENST00000567320 LCE1AQ5T7P2 110 aa4.24□□□□□ -1.73
CDH1-211ENST00000567320 RGS7BPQ6MZT1 257 aaPredicted RBP4.24□□□□□ -1.73
CDH1-211ENST00000567320 TRIM72Q6ZMU5 477 aa4.24□□□□□ -1.73
CDH1-211ENST00000567320 CATSPERGQ6ZRH7 1159 aa4.24□□□□□ -1.73
CDH1-211ENST00000567320 PARS2Q7L3T8 475 aaKnown RBP4.24□□□□□ -1.73
CDH1-211ENST00000567320 PPP1R3BQ86XI6 285 aa4.24□□□□□ -1.73
CDH1-211ENST00000567320 GLG1Q92896 1179 aa4.24□□□□□ -1.73
CDH1-211ENST00000567320 DAZAP1Q96EP5 407 aaKnown RBP4.24□□□□□ -1.73
CDH1-211ENST00000567320 PDGFCQ9NRA1 345 aa4.24□□□□□ -1.73
CDH1-211ENST00000567320 PNPOQ9NVS9 261 aa4.24□□□□□ -1.73
CDH1-211ENST00000567320 HESX1Q9UBX0 185 aa4.24□□□□□ -1.73
CDH1-211ENST00000567320 ADAMTS5Q9UNA0 930 aa4.24□□□□□ -1.73
CDH1-211ENST00000567320 TNKSO95271 1327 aa4.23□□□□□ -1.73
CDH1-211ENST00000567320 A1L4Q6 167 aa4.23□□□□□ -1.73
CDH1-211ENST00000567320 UNC5CO95185 931 aa4.23□□□□□ -1.73
CDH1-211ENST00000567320 PDE8BO95263 885 aa4.23□□□□□ -1.73
CDH1-211ENST00000567320 TYRP14679 529 aa4.23□□□□□ -1.73
CDH1-211ENST00000567320 TCF15Q12870 199 aa4.23□□□□□ -1.73
CDH1-211ENST00000567320 TBC1D25Q3MII6 688 aa4.23□□□□□ -1.73
CDH1-211ENST00000567320 ZNF260Q3ZCT1 412 aa4.23□□□□□ -1.73
CDH1-211ENST00000567320 L1TD1Q5T7N2 865 aaKnown RBP4.23□□□□□ -1.73
CDH1-211ENST00000567320 SERPINA13PQ6UXR4 307 aa4.23□□□□□ -1.73
CDH1-211ENST00000567320 ABHD11Q8NFV4 315 aa4.23□□□□□ -1.73
CDH1-211ENST00000567320 BRIX1Q8TDN6 353 aaKnown RBP4.23□□□□□ -1.73
CDH1-211ENST00000567320 ATG4AQ8WYN0 398 aa4.23□□□□□ -1.73
CDH1-211ENST00000567320 HMCESQ96FZ2 354 aa4.23□□□□□ -1.73
CDH1-211ENST00000567320 MOGAT1Q96PD6 335 aa4.23□□□□□ -1.73
CDH1-211ENST00000567320 PTDSS2Q9BVG9 487 aa4.23□□□□□ -1.73
CDH1-211ENST00000567320 DPCDQ9BVM2 203 aaPredicted RBP4.23□□□□□ -1.73
CDH1-211ENST00000567320 PRSS22Q9GZN4 317 aa4.23□□□□□ -1.73
CDH1-211ENST00000567320 TUBA8Q9NY65 449 aaPredicted RBP4.23□□□□□ -1.73
CDH1-211ENST00000567320 SH2B3Q9UQQ2 575 aa4.23□□□□□ -1.73
CDH1-211ENST00000567320 TRIM38O00635 465 aa4.22□□□□□ -1.73
CDH1-211ENST00000567320 DCLK1O15075 740 aa4.22□□□□□ -1.73
CDH1-211ENST00000567320 IL33O95760 270 aa4.22□□□□□ -1.73
CDH1-211ENST00000567320 TOP3BO95985 862 aaKnown RBP4.22□□□□□ -1.73
CDH1-211ENST00000567320 GRPP07492 148 aa4.22□□□□□ -1.73
CDH1-211ENST00000567320 PPIFP30405 207 aaKnown RBP4.22□□□□□ -1.73
CDH1-211ENST00000567320 RECQLP46063 649 aaPredicted RBP4.22□□□□□ -1.73
CDH1-211ENST00000567320 MAP2K6P52564 334 aa4.22□□□□□ -1.73
CDH1-211ENST00000567320 LRRC41Q15345 812 aa4.22□□□□□ -1.73
CDH1-211ENST00000567320 DEPDC1Q5TB30 811 aa4.22□□□□□ -1.73
CDH1-211ENST00000567320 USP45Q70EL2 814 aa4.22□□□□□ -1.73
CDH1-211ENST00000567320 NANOGP1Q8N7R0 232 aa4.22□□□□□ -1.73
CDH1-211ENST00000567320 PRPF38AQ8NAV1 312 aaKnown RBP4.22□□□□□ -1.73
CDH1-211ENST00000567320 FAM167AQ96KS9 214 aa4.22□□□□□ -1.73
CDH1-211ENST00000567320 WACQ9BTA9 647 aa4.22□□□□□ -1.73
CDH1-211ENST00000567320 FSD1LQ9BXM9 530 aa4.22□□□□□ -1.73
CDH1-211ENST00000567320 SLC13A1Q9BZW2 595 aa4.22□□□□□ -1.73
CDH1-211ENST00000567320 SARS2Q9NP81 518 aaKnown RBP4.22□□□□□ -1.73
CDH1-211ENST00000567320 WDR17Q8IZU2 1322 aa4.21□□□□□ -1.73
CDH1-211ENST00000567320 ALG1L2C9J202 215 aa4.21□□□□□ -1.74
CDH1-211ENST00000567320 MYO1CO00159 1063 aa4.21□□□□□ -1.74
CDH1-211ENST00000567320 ZRANB2O95218 330 aaKnown RBP eCLIP4.21□□□□□ -1.74
CDH1-211ENST00000567320 SNHG28P0DPA3 235 aa4.21□□□□□ -1.74
CDH1-211ENST00000567320 HDCP19113 662 aa4.21□□□□□ -1.74
CDH1-211ENST00000567320 SOX8P57073 446 aa4.21□□□□□ -1.74
CDH1-211ENST00000567320 TRIP6Q15654 476 aaKnown RBP4.21□□□□□ -1.74
CDH1-211ENST00000567320 PGS1Q32NB8 556 aa4.21□□□□□ -1.74
CDH1-211ENST00000567320 KHDC1LQ5JSQ8 128 aa4.21□□□□□ -1.74
CDH1-211ENST00000567320 FCRL6Q6DN72 434 aa4.21□□□□□ -1.74
CDH1-211ENST00000567320 AWAT2Q6E213 333 aa4.21□□□□□ -1.74
CDH1-211ENST00000567320 TECPR1Q7Z6L1 1165 aa4.21□□□□□ -1.74
CDH1-211ENST00000567320 CATIPQ7Z7H3 387 aa4.21□□□□□ -1.74
CDH1-211ENST00000567320 GALNT16Q8N428 558 aa4.21□□□□□ -1.74
CDH1-211ENST00000567320 RP9Q8TA86 221 aaKnown RBP4.21□□□□□ -1.74
CDH1-211ENST00000567320 SLC35A4Q96G79 324 aa4.21□□□□□ -1.74
CDH1-211ENST00000567320 TRNAU1APQ9NX07 287 aaKnown RBP4.21□□□□□ -1.74
CDH1-211ENST00000567320 TFCP2L1Q9NZI6 479 aa4.21□□□□□ -1.74
CDH1-211ENST00000567320 KLHL13Q9P2N7 655 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms