RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 SFT2D3Q587I9 215 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 DEPDC1Q5TB30 811 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 GGT6Q6P531 493 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 PRUNE1Q86TP1 453 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 ALLCQ8N6M5 410 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 SPERTQ8NA61 448 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 TBC1D15Q8TC07 691 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 SLCO2A1Q92959 643 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 TRIM9Q9C026 710 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 VPS33BQ9H267 617 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 AMFRQ9UKV5 643 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 SMG5Q9UPR3 1016 aaKnown RBP3.04□□□□□ -1.92
CHD9-218ENST00000566029 NALCNQ8IZF0 1738 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 IFT172Q9UG01 1749 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 NPHP3-ACAD11A0A0J9YXS1 232 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 CFAP69A5D8W1 941 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 C6orf229H3BNL8 230 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 PSMD3O43242 534 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 FAM155BO75949 473 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 CXCR2P25025 360 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 TKTP29401 623 aaKnown RBP3.04□□□□□ -1.92
CHD9-218ENST00000566029 UBE3CQ15386 1083 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 CYFIP1Q7L576 1253 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 HS2ST1Q7LGA3 356 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 CABP7Q86V35 215 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 TTC29Q8NA56 475 aaPredicted RBP3.04□□□□□ -1.92
CHD9-218ENST00000566029 MTBPQ96DY7 904 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 BTBD10Q9BSF8 475 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 FOXP3Q9BZS1 431 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 GPBP1L1Q9HC44 474 aaPredicted RBP3.04□□□□□ -1.92
CHD9-218ENST00000566029 STK17AQ9UEE5 414 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 AJAP1Q9UKB5 411 aaPredicted RBP3.04□□□□□ -1.92
CHD9-218ENST00000566029 STRIP2Q9ULQ0 834 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 TM7SF2O76062 418 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 RXRAP19793 462 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 GRK2P25098 689 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 GCAP28676 217 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 ENTPD1P49961 510 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 MADCAM1Q13477 382 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 OASLQ15646 514 aaKnown RBP3.04□□□□□ -1.92
CHD9-218ENST00000566029 PUS10Q3MIT2 529 aaKnown RBP3.04□□□□□ -1.92
CHD9-218ENST00000566029 NADK2Q4G0N4 442 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 MTDHQ86UE4 582 aaKnown RBP3.04□□□□□ -1.92
CHD9-218ENST00000566029 ITIH5Q86UX2 942 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 RELL1Q8IUW5 271 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 SNIP1Q8TAD8 396 aaKnown RBP3.04□□□□□ -1.92
CHD9-218ENST00000566029 ZNF75CPQ92670 426 aaPredicted RBP3.04□□□□□ -1.92
CHD9-218ENST00000566029 TTC25Q96NG3 672 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 KCNK13Q9HB14 408 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 SLC7A8Q9UHI5 535 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 ANAPC5Q9UJX4 755 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 PCDHA4Q9UN74 947 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 ALKQ9UM73 1620 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 PI4K2BG5E9Z4 385 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 COILP38432 576 aaPredicted RBP3.04□□□□□ -1.92
CHD9-218ENST00000566029 NOP14P78316 857 aaKnown RBP3.04□□□□□ -1.92
CHD9-218ENST00000566029 BFSP1Q12934 665 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 MED21Q13503 144 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 NR1D2Q14995 579 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 SLC15A2Q16348 729 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 NDUFA5Q16718 116 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 TRIM71Q2Q1W2 868 aaKnown RBP3.04□□□□□ -1.92
CHD9-218ENST00000566029 ANKDD1AQ495B1 522 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 AKAP4Q5JQC9 854 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 SLC27A3Q5K4L6 730 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 PCNX4Q63HM2 1172 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 DENND6BQ8NEG7 585 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 RFWD2Q8NHY2 731 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 PSPC1Q8WXF1 523 aaKnown RBP3.04□□□□□ -1.92
CHD9-218ENST00000566029 TTC17Q96AE7 1141 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 OXNAD1Q96HP4 312 aaPredicted RBP3.04□□□□□ -1.92
CHD9-218ENST00000566029 HEPHQ9BQS7 1158 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 CNPY3Q9BT09 278 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 MBD2Q9UBB5 411 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 COG5Q9UP83 839 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 SESN1Q9Y6P5 492 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 MYO3BQ8WXR4 1341 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 H3BSA7 217 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 PLOD2O00469 737 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 PRDM1O75626 825 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 GNA11P29992 359 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 MARCKSL1P49006 195 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 HIRAP54198 1017 aaPredicted RBP3.04□□□□□ -1.92
CHD9-218ENST00000566029 ASIC1P78348 528 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 TRIP10Q15642 601 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 PHKG1Q16816 387 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 LONRF1Q17RB8 773 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 TMEM266Q2M3C6 531 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 TMEM119Q4V9L6 283 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 C10orf76Q5T2E6 689 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 FASTKD5Q7L8L6 764 aaKnown RBP3.04□□□□□ -1.92
CHD9-218ENST00000566029 CCDC117Q8IWD4 279 aaPredicted RBP3.04□□□□□ -1.92
CHD9-218ENST00000566029 SPATA5Q8NB90 893 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 PDCD6IPQ8WUM4 868 aaKnown RBP3.04□□□□□ -1.92
CHD9-218ENST00000566029 TANKQ92844 425 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 ZNF641Q96N77 438 aaPredicted RBP3.04□□□□□ -1.92
CHD9-218ENST00000566029 FMO2Q99518 471 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 ELAC1Q9H777 363 aaKnown RBP3.04□□□□□ -1.92
CHD9-218ENST00000566029 KAT6AQ92794 2004 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 E9PMD0 336 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms