RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 BAP1Q92560 729 aa13.42□□□□□ -0.26
SF3B3-206ENST00000565990 PCMTD1Q96MG8 357 aaPredicted RBP13.42□□□□□ -0.26
SF3B3-206ENST00000565990 SYT15Q9BQS2 421 aa13.42□□□□□ -0.26
SF3B3-206ENST00000565990 DNAI2Q9GZS0 605 aa13.42□□□□□ -0.26
SF3B3-206ENST00000565990 HMGXB4Q9UGU5 601 aa13.42□□□□□ -0.26
SF3B3-206ENST00000565990 AFF4Q9UHB7 1163 aaKnown RBP13.42□□□□□ -0.26
SF3B3-206ENST00000565990 MYO6Q9UM54 1294 aa13.42□□□□□ -0.26
SF3B3-206ENST00000565990 CAPN11Q9UMQ6 739 aa13.42□□□□□ -0.26
SF3B3-206ENST00000565990 PCDHB4Q9Y5E5 795 aa13.42□□□□□ -0.26
SF3B3-206ENST00000565990 PER2O15055 1255 aa13.41□□□□□ -0.26
SF3B3-206ENST00000565990 NCK2O43639 380 aa13.41□□□□□ -0.26
SF3B3-206ENST00000565990 CLSTN1O94985 981 aa13.41□□□□□ -0.26
SF3B3-206ENST00000565990 OR4Q2P0C623 313 aa13.41□□□□□ -0.26
SF3B3-206ENST00000565990 VDRP11473 427 aa13.41□□□□□ -0.26
SF3B3-206ENST00000565990 TSPY1Q01534 308 aa13.41□□□□□ -0.26
SF3B3-206ENST00000565990 HYAL1Q12794 435 aa13.41□□□□□ -0.26
SF3B3-206ENST00000565990 TBX2Q13207 712 aaPredicted RBP13.41□□□□□ -0.26
SF3B3-206ENST00000565990 CTC1Q2NKJ3 1217 aa13.41□□□□□ -0.26
SF3B3-206ENST00000565990 SLC39A12Q504Y0 691 aa13.41□□□□□ -0.26
SF3B3-206ENST00000565990 TCEAL5Q5H9L2 206 aa13.41□□□□□ -0.26
SF3B3-206ENST00000565990 ARHGAP17Q68EM7 881 aa13.41□□□□□ -0.26
SF3B3-206ENST00000565990 PALB2Q86YC2 1186 aa13.41□□□□□ -0.26
SF3B3-206ENST00000565990 TCEAL8Q8IYN2 117 aa13.41□□□□□ -0.26
SF3B3-206ENST00000565990 EFHBQ8N7U6 833 aa13.41□□□□□ -0.26
SF3B3-206ENST00000565990 PPP2R3CQ969Q6 453 aa13.41□□□□□ -0.26
SF3B3-206ENST00000565990 PCED1BQ96HM7 432 aa13.41□□□□□ -0.26
SF3B3-206ENST00000565990 FUBP3Q96I24 572 aaKnown RBP eCLIP13.41□□□□□ -0.26
SF3B3-206ENST00000565990 HEXIM2Q96MH2 286 aaKnown RBP13.41□□□□□ -0.26
SF3B3-206ENST00000565990 GAS2L1Q99501 681 aaPredicted RBP13.41□□□□□ -0.26
SF3B3-206ENST00000565990 HNRNPABQ99729 332 aaKnown RBP13.41□□□□□ -0.26
SF3B3-206ENST00000565990 LPIN3Q9BQK8 851 aa13.41□□□□□ -0.26
SF3B3-206ENST00000565990 ZSWIM1Q9BR11 485 aa13.41□□□□□ -0.26
SF3B3-206ENST00000565990 B3GNT5Q9BYG0 378 aa13.41□□□□□ -0.26
SF3B3-206ENST00000565990 PLEKHA4Q9H4M7 779 aa13.41□□□□□ -0.26
SF3B3-206ENST00000565990 ABCB6Q9NP58 842 aa13.41□□□□□ -0.26
SF3B3-206ENST00000565990 NLRC4Q9NPP4 1024 aa13.41□□□□□ -0.26
SF3B3-206ENST00000565990 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.41□□□□□ -0.26
SF3B3-206ENST00000565990 MYH10P35580 1976 aa13.41□□□□□ -0.26
SF3B3-206ENST00000565990 GREB1Q4ZG55 1949 aa13.41□□□□□ -0.26
SF3B3-206ENST00000565990 MTMR11A4FU01 709 aa13.4□□□□□ -0.26
SF3B3-206ENST00000565990 F8VZ95 297 aa13.4□□□□□ -0.26
SF3B3-206ENST00000565990 SEC24AO95486 1093 aa13.4□□□□□ -0.26
SF3B3-206ENST00000565990 TRIM21P19474 475 aaKnown RBP13.4□□□□□ -0.26
SF3B3-206ENST00000565990 SOX5P35711 763 aa13.4□□□□□ -0.26
SF3B3-206ENST00000565990 NRIP1P48552 1158 aa13.4□□□□□ -0.26
SF3B3-206ENST00000565990 BPIFB4P59827 614 aa13.4□□□□□ -0.26
SF3B3-206ENST00000565990 ETF1P62495 437 aaKnown RBP13.4□□□□□ -0.26
SF3B3-206ENST00000565990 TUBB4BP68371 445 aa13.4□□□□□ -0.26
SF3B3-206ENST00000565990 ARID5BQ14865 1188 aa13.4□□□□□ -0.26
SF3B3-206ENST00000565990 CNGA2Q16280 664 aa13.4□□□□□ -0.26
SF3B3-206ENST00000565990 ZNF394Q53GI3 561 aa13.4□□□□□ -0.26
SF3B3-206ENST00000565990 E4F1Q66K89 784 aaPredicted RBP13.4□□□□□ -0.26
SF3B3-206ENST00000565990 IRF2BP2Q7Z5L9 587 aa13.4□□□□□ -0.26
SF3B3-206ENST00000565990 RBM23Q86U06 439 aaKnown RBP13.4□□□□□ -0.26
SF3B3-206ENST00000565990 FUKQ8N0W3 1084 aa13.4□□□□□ -0.26
SF3B3-206ENST00000565990 C12orf29Q8N999 325 aa13.4□□□□□ -0.26
SF3B3-206ENST00000565990 RBBP8NLQ8NC74 664 aaPredicted RBP13.4□□□□□ -0.26
SF3B3-206ENST00000565990 SPPL2BQ8TCT7 592 aa13.4□□□□□ -0.26
SF3B3-206ENST00000565990 CYFIP2Q96F07 1278 aa13.4□□□□□ -0.26
SF3B3-206ENST00000565990 PPP1R13BQ96KQ4 1090 aa13.4□□□□□ -0.26
SF3B3-206ENST00000565990 AIPL1Q9NZN9 384 aa13.4□□□□□ -0.26
SF3B3-206ENST00000565990 DPP7Q9UHL4 492 aa13.4□□□□□ -0.26
SF3B3-206ENST00000565990 FBXW11Q9UKB1 542 aa13.4□□□□□ -0.26
SF3B3-206ENST00000565990 PCDHB5Q9Y5E4 795 aa13.4□□□□□ -0.26
SF3B3-206ENST00000565990 HCFC2Q9Y5Z7 792 aa13.4□□□□□ -0.26
SF3B3-206ENST00000565990 CYP26A1O43174 497 aa13.39□□□□□ -0.27
SF3B3-206ENST00000565990 GLUD1P00367 558 aa13.39□□□□□ -0.27
SF3B3-206ENST00000565990 GYPCP04921 128 aa13.39□□□□□ -0.27
SF3B3-206ENST00000565990 HAPLN1P10915 354 aaPredicted RBP13.39□□□□□ -0.27
SF3B3-206ENST00000565990 IGFBP4P22692 258 aa13.39□□□□□ -0.27
SF3B3-206ENST00000565990 STAT1P42224 750 aa13.39□□□□□ -0.27
SF3B3-206ENST00000565990 MAGEA11P43364 429 aa13.39□□□□□ -0.27
SF3B3-206ENST00000565990 ARPP19P56211 112 aa13.39□□□□□ -0.27
SF3B3-206ENST00000565990 PSMC1P62191 440 aaKnown RBP13.39□□□□□ -0.27
SF3B3-206ENST00000565990 ZBED6P86452 979 aa13.39□□□□□ -0.27
SF3B3-206ENST00000565990 ADCY1Q08828 1119 aa13.39□□□□□ -0.27
SF3B3-206ENST00000565990 ORC1Q13415 861 aa13.39□□□□□ -0.27
SF3B3-206ENST00000565990 TUBB2AQ13885 445 aa13.39□□□□□ -0.27
SF3B3-206ENST00000565990 RAPGEF1Q13905 1077 aa13.39□□□□□ -0.27
SF3B3-206ENST00000565990 MDH1BQ5I0G3 518 aa13.39□□□□□ -0.27
SF3B3-206ENST00000565990 LCLAT1Q6UWP7 414 aa13.39□□□□□ -0.27
SF3B3-206ENST00000565990 C4orf50Q6ZRC1 276 aa13.39□□□□□ -0.27
SF3B3-206ENST00000565990 CACNA2D4Q7Z3S7 1137 aa13.39□□□□□ -0.27
SF3B3-206ENST00000565990 GLYCTKQ8IVS8 523 aa13.39□□□□□ -0.27
SF3B3-206ENST00000565990 ATAD1Q8NBU5 361 aa13.39□□□□□ -0.27
SF3B3-206ENST00000565990 VN1R2Q8NFZ6 395 aa13.39□□□□□ -0.27
SF3B3-206ENST00000565990 ZNF606Q8WXB4 792 aa13.39□□□□□ -0.27
SF3B3-206ENST00000565990 MYLIPQ8WY64 445 aa13.39□□□□□ -0.27
SF3B3-206ENST00000565990 TFAP2BQ92481 460 aa13.39□□□□□ -0.27
SF3B3-206ENST00000565990 SYN2Q92777 582 aaPredicted RBP13.39□□□□□ -0.27
SF3B3-206ENST00000565990 CEP295NLQ96MC4 621 aa13.39□□□□□ -0.27
SF3B3-206ENST00000565990 TUBB2BQ9BVA1 445 aa13.39□□□□□ -0.27
SF3B3-206ENST00000565990 UBXN6Q9BZV1 441 aa13.39□□□□□ -0.27
SF3B3-206ENST00000565990 CRISPLD1Q9H336 500 aa13.39□□□□□ -0.27
SF3B3-206ENST00000565990 CSNK1G1Q9HCP0 422 aa13.39□□□□□ -0.27
SF3B3-206ENST00000565990 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.38□□□□□ -0.27
SF3B3-206ENST00000565990 GLP2RO95838 553 aa13.38□□□□□ -0.27
SF3B3-206ENST00000565990 SPATA31D3P0C874 917 aa13.38□□□□□ -0.27
SF3B3-206ENST00000565990 CPB1P15086 417 aa13.38□□□□□ -0.27
SF3B3-206ENST00000565990 EPCAMP16422 314 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms