RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 SIRT2Q8IXJ6 389 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 OXR1Q8N573 874 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 CISD2Q8N5K1 135 aaKnown RBP3.26□□□□□ -1.89
CHD9-216ENST00000565803 ATP11CQ8NB49 1132 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 MTMR9Q96QG7 549 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 SMC6Q96SB8 1091 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 YIPF2Q9BWQ6 316 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 GPR63Q9BZJ6 419 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 TRPV6Q9H1D0 765 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 NDST4Q9H3R1 872 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 VCPKMTQ9H867 229 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 FBRSL1Q9HCM7 1045 aaKnown RBP3.26□□□□□ -1.89
CHD9-216ENST00000565803 MED4Q9NPJ6 270 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 ARHGEF4Q9NR80 690 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 STK39Q9UEW8 545 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 TRAF3IP3Q9Y228 551 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 PTPN22Q9Y2R2 807 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 RTCBQ9Y3I0 505 aaKnown RBP3.26□□□□□ -1.89
CHD9-216ENST00000565803 NR2E3Q9Y5X4 410 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 DDX60LQ5H9U9 1706 aaKnown RBP3.26□□□□□ -1.89
CHD9-216ENST00000565803 CLRN2A0PK11 232 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 PTPDC1A2A3K4 754 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 METTL12A8MUP2 240 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 F8VZ95 297 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 PODXLO00592 558 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 FRS3O43559 492 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 PRPSAP2O60256 369 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 FOXD2O60548 495 aaPredicted RBP3.26□□□□□ -1.89
CHD9-216ENST00000565803 UBXN7O94888 489 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 RPLP1P05386 114 aaKnown RBP3.26□□□□□ -1.89
CHD9-216ENST00000565803 SPARCP09486 303 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 PABPC1P11940 636 aaKnown RBP3.26□□□□□ -1.89
CHD9-216ENST00000565803 RARGP13631 454 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 NCF1P14598 390 aaPredicted RBP3.26□□□□□ -1.89
CHD9-216ENST00000565803 GCFC2P16383 781 aaKnown RBP3.26□□□□□ -1.89
CHD9-216ENST00000565803 HDCP19113 662 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 ACAT1P24752 427 aaKnown RBP3.26□□□□□ -1.89
CHD9-216ENST00000565803 NFKBIAP25963 317 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 RFC1P35251 1148 aaPredicted RBP3.26□□□□□ -1.89
CHD9-216ENST00000565803 GGT5P36269 586 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 RABIFP47224 123 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 TLE2Q04725 743 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 GALNT2Q10471 571 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 SP140Q13342 867 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 FAM47CQ5HY64 1035 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 SPOUT1Q5T280 376 aaKnown RBP3.26□□□□□ -1.89
CHD9-216ENST00000565803 RGMBQ6NW40 437 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 PMF1Q6P1K2 205 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 ZYG11AQ6WRX3 759 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 B3GNT6Q6ZMB0 384 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 INTS8Q75QN2 995 aaKnown RBP3.26□□□□□ -1.89
CHD9-216ENST00000565803 ZNF771Q7L3S4 317 aaPredicted RBP3.26□□□□□ -1.89
CHD9-216ENST00000565803 DGLUCYQ7Z3D6 616 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 PIWIL3Q7Z3Z3 882 aaKnown RBP3.26□□□□□ -1.89
CHD9-216ENST00000565803 GALNT15Q8N3T1 639 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 MIGA1Q8NAN2 632 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 PCSK9Q8NBP7 692 aaKnown RBP3.26□□□□□ -1.89
CHD9-216ENST00000565803 IP6K1Q92551 441 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 SLC5A5Q92911 643 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 ZNF653Q96CK0 615 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 SHISA4Q96DD7 197 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 VPS50Q96JG6 964 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 TEX13AQ9BXU3 409 aaPredicted RBP3.26□□□□□ -1.89
CHD9-216ENST00000565803 MRPL4Q9BYD3 311 aaKnown RBP3.26□□□□□ -1.89
CHD9-216ENST00000565803 SMARCAD1Q9H4L7 1026 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 ATP13A1Q9HD20 1204 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 AGPAT3Q9NRZ7 376 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 FBXO40Q9UH90 709 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 ATP6V1HQ9UI12 483 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 DTNAQ9Y4J8 743 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 PMF1-BGLAPU3KQ54 211 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 TTC41PQ6P2S7 1318 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 MYPNQ86TC9 1320 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 SMIM30A4D0T7 59 aa3.25□□□□□ -1.89
CHD9-216ENST00000565803 C16orf96A6NNT2 1141 aa3.25□□□□□ -1.89
CHD9-216ENST00000565803 PHF20L1A8MW92 1017 aa3.25□□□□□ -1.89
CHD9-216ENST00000565803 K7EPI3 171 aa3.25□□□□□ -1.89
CHD9-216ENST00000565803 MAGEB3O15480 346 aa3.25□□□□□ -1.89
CHD9-216ENST00000565803 EFCAB14O75071 495 aa3.25□□□□□ -1.89
CHD9-216ENST00000565803 SOCS5O75159 536 aa3.25□□□□□ -1.89
CHD9-216ENST00000565803 CIB2O75838 187 aa3.25□□□□□ -1.89
CHD9-216ENST00000565803 PLATP00750 562 aa3.25□□□□□ -1.89
CHD9-216ENST00000565803 NR3C2P08235 984 aa3.25□□□□□ -1.89
CHD9-216ENST00000565803 TPP2P29144 1249 aaPredicted RBP3.25□□□□□ -1.89
CHD9-216ENST00000565803 EEF1DP29692 281 aaKnown RBP3.25□□□□□ -1.89
CHD9-216ENST00000565803 HNF1BP35680 557 aa3.25□□□□□ -1.89
CHD9-216ENST00000565803 HSD17B2P37059 387 aa3.25□□□□□ -1.89
CHD9-216ENST00000565803 ECI1P42126 302 aa3.25□□□□□ -1.89
CHD9-216ENST00000565803 HNMTP50135 292 aa3.25□□□□□ -1.89
CHD9-216ENST00000565803 CSNK2BP67870 215 aa3.25□□□□□ -1.89
CHD9-216ENST00000565803 RPP30P78346 268 aaKnown RBP3.25□□□□□ -1.89
CHD9-216ENST00000565803 COTL1Q14019 142 aa3.25□□□□□ -1.89
CHD9-216ENST00000565803 PTK2BQ14289 1009 aa3.25□□□□□ -1.89
CHD9-216ENST00000565803 TBCEQ15813 527 aaPredicted RBP3.25□□□□□ -1.89
CHD9-216ENST00000565803 CEP55Q53EZ4 464 aa3.25□□□□□ -1.89
CHD9-216ENST00000565803 FAM69AQ5T7M9 428 aa3.25□□□□□ -1.89
CHD9-216ENST00000565803 ATPAF1Q5TC12 328 aaPredicted RBP3.25□□□□□ -1.89
CHD9-216ENST00000565803 PLBD1Q6P4A8 553 aa3.25□□□□□ -1.89
CHD9-216ENST00000565803 ERICH5Q6P6B1 374 aa3.25□□□□□ -1.89
CHD9-216ENST00000565803 NLRC3Q7RTR2 1065 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms