RNA–Protein interactions for RNA: ENST00000565070.5

NSMCE1-208, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-208ENST00000565070 SOX4Q06945 474 aaPredicted RBP13.42□□□□□ -0.26
NSMCE1-208ENST00000565070 BTG3Q14201 252 aaPredicted RBP13.42□□□□□ -0.26
NSMCE1-208ENST00000565070 SMC1AQ14683 1233 aaKnown RBP13.42□□□□□ -0.26
NSMCE1-208ENST00000565070 FAM117BQ6P1L5 589 aa13.42□□□□□ -0.26
NSMCE1-208ENST00000565070 MON1BQ7L1V2 547 aa13.42□□□□□ -0.26
NSMCE1-208ENST00000565070 IFT20Q8IY31 132 aa13.42□□□□□ -0.26
NSMCE1-208ENST00000565070 UBL4BQ8N7F7 174 aa13.42□□□□□ -0.26
NSMCE1-208ENST00000565070 CYFIP2Q96F07 1278 aa13.42□□□□□ -0.26
NSMCE1-208ENST00000565070 VCPIP1Q96JH7 1222 aa13.42□□□□□ -0.26
NSMCE1-208ENST00000565070 RAD9AQ99638 391 aa13.42□□□□□ -0.26
NSMCE1-208ENST00000565070 VRTNQ9H8Y1 702 aa13.42□□□□□ -0.26
NSMCE1-208ENST00000565070 RC3H2Q9HBD1 1191 aaKnown RBP13.42□□□□□ -0.26
NSMCE1-208ENST00000565070 PCDH10Q9P2E7 1040 aa13.42□□□□□ -0.26
NSMCE1-208ENST00000565070 AGAP1Q9UPQ3 857 aa13.42□□□□□ -0.26
NSMCE1-208ENST00000565070 PODXLO00592 558 aa13.41□□□□□ -0.26
NSMCE1-208ENST00000565070 PIRO00625 290 aa13.41□□□□□ -0.26
NSMCE1-208ENST00000565070 CLSTN1O94985 981 aa13.41□□□□□ -0.26
NSMCE1-208ENST00000565070 FGGP02679 453 aa13.41□□□□□ -0.26
NSMCE1-208ENST00000565070 BMP8BP34820 402 aa13.41□□□□□ -0.26
NSMCE1-208ENST00000565070 CTNNA1P35221 906 aaKnown RBP13.41□□□□□ -0.26
NSMCE1-208ENST00000565070 GATMP50440 423 aa13.41□□□□□ -0.26
NSMCE1-208ENST00000565070 GUCY2FP51841 1108 aa13.41□□□□□ -0.26
NSMCE1-208ENST00000565070 MESDQ14696 234 aa13.41□□□□□ -0.26
NSMCE1-208ENST00000565070 ZNF699Q32M78 642 aa13.41□□□□□ -0.26
NSMCE1-208ENST00000565070 SV2CQ496J9 727 aa13.41□□□□□ -0.26
NSMCE1-208ENST00000565070 PAN2Q504Q3 1202 aaKnown RBP13.41□□□□□ -0.26
NSMCE1-208ENST00000565070 NAA35Q5VZE5 725 aa13.41□□□□□ -0.26
NSMCE1-208ENST00000565070 PHF13Q86YI8 300 aaPredicted RBP13.41□□□□□ -0.26
NSMCE1-208ENST00000565070 COLGALT2Q8IYK4 626 aa13.41□□□□□ -0.26
NSMCE1-208ENST00000565070 CPA5Q8WXQ8 436 aa13.41□□□□□ -0.26
NSMCE1-208ENST00000565070 HPDLQ96IR7 371 aa13.41□□□□□ -0.26
NSMCE1-208ENST00000565070 NAP1L3Q99457 506 aaPredicted RBP13.41□□□□□ -0.26
NSMCE1-208ENST00000565070 AP1M1Q9BXS5 423 aa13.41□□□□□ -0.26
NSMCE1-208ENST00000565070 CISHQ9NSE2 258 aa13.41□□□□□ -0.26
NSMCE1-208ENST00000565070 ARHGEF37A1IGU5 675 aa13.4□□□□□ -0.26
NSMCE1-208ENST00000565070 CASTOR2A6NHX0 329 aa13.4□□□□□ -0.26
NSMCE1-208ENST00000565070 BHMG1C9JSJ3 638 aaPredicted RBP13.4□□□□□ -0.26
NSMCE1-208ENST00000565070 RAD51CO43502 376 aa13.4□□□□□ -0.26
NSMCE1-208ENST00000565070 HEXIM1O94992 359 aaKnown RBP13.4□□□□□ -0.26
NSMCE1-208ENST00000565070 CFHP08603 1231 aa13.4□□□□□ -0.26
NSMCE1-208ENST00000565070 RRM1P23921 792 aa13.4□□□□□ -0.26
NSMCE1-208ENST00000565070 CTNNA2P26232 953 aa13.4□□□□□ -0.26
NSMCE1-208ENST00000565070 TAF6P49848 677 aa13.4□□□□□ -0.26
NSMCE1-208ENST00000565070 SHHQ15465 462 aa13.4□□□□□ -0.26
NSMCE1-208ENST00000565070 UPP1Q16831 310 aa13.4□□□□□ -0.26
NSMCE1-208ENST00000565070 DCLRE1AQ6PJP8 1040 aa13.4□□□□□ -0.26
NSMCE1-208ENST00000565070 KLHL7Q8IXQ5 586 aa13.4□□□□□ -0.26
NSMCE1-208ENST00000565070 GSPT2Q8IYD1 628 aaKnown RBP13.4□□□□□ -0.26
NSMCE1-208ENST00000565070 ZNF606Q8WXB4 792 aa13.4□□□□□ -0.26
NSMCE1-208ENST00000565070 KRT35Q92764 455 aa13.4□□□□□ -0.26
NSMCE1-208ENST00000565070 SLITRK6Q9H5Y7 841 aa13.4□□□□□ -0.26
NSMCE1-208ENST00000565070 NRDE2Q9H7Z3 1164 aa13.4□□□□□ -0.26
NSMCE1-208ENST00000565070 GOLGA2P5Q9HBQ8 144 aa13.4□□□□□ -0.26
NSMCE1-208ENST00000565070 AAASQ9NRG9 546 aa13.4□□□□□ -0.26
NSMCE1-208ENST00000565070 SCN1AP35498 2009 aa13.4□□□□□ -0.26
NSMCE1-208ENST00000565070 CCDC66A2RUB6 948 aa13.4□□□□□ -0.26
NSMCE1-208ENST00000565070 TMEM189-UBE2V1I3L0A0 370 aa13.4□□□□□ -0.26
NSMCE1-208ENST00000565070 SART1O43290 800 aaKnown RBP13.4□□□□□ -0.26
NSMCE1-208ENST00000565070 THAP12O43422 761 aa13.4□□□□□ -0.26
NSMCE1-208ENST00000565070 TLL1O43897 1013 aa13.4□□□□□ -0.26
NSMCE1-208ENST00000565070 CAPN15O75808 1086 aa13.4□□□□□ -0.26
NSMCE1-208ENST00000565070 DDHD2O94830 711 aa13.4□□□□□ -0.26
NSMCE1-208ENST00000565070 ALDH2P05091 517 aa13.4□□□□□ -0.26
NSMCE1-208ENST00000565070 LAG3P18627 525 aa13.4□□□□□ -0.26
NSMCE1-208ENST00000565070 ALDH7A1P49419 539 aaKnown RBP13.4□□□□□ -0.26
NSMCE1-208ENST00000565070 CLCNKBP51801 687 aa13.4□□□□□ -0.26
NSMCE1-208ENST00000565070 MLLT1Q03111 559 aaPredicted RBP13.4□□□□□ -0.26
NSMCE1-208ENST00000565070 C1QBPQ07021 282 aaKnown RBP13.4□□□□□ -0.26
NSMCE1-208ENST00000565070 ZNF667Q5HYK9 610 aa13.4□□□□□ -0.26
NSMCE1-208ENST00000565070 C9orf50Q5SZB4 431 aa13.4□□□□□ -0.26
NSMCE1-208ENST00000565070 EMBQ6PCB8 327 aa13.4□□□□□ -0.26
NSMCE1-208ENST00000565070 ZNF280BQ86YH2 543 aa13.4□□□□□ -0.26
NSMCE1-208ENST00000565070 EIF1ADQ8N9N8 165 aaKnown RBP13.4□□□□□ -0.26
NSMCE1-208ENST00000565070 BTBD6Q96KE9 485 aa13.4□□□□□ -0.26
NSMCE1-208ENST00000565070 HINFPQ9BQA5 517 aa13.4□□□□□ -0.26
NSMCE1-208ENST00000565070 COLEC11Q9BWP8 271 aa13.4□□□□□ -0.26
NSMCE1-208ENST00000565070 FAM124BQ9H5Z6 455 aaPredicted RBP13.4□□□□□ -0.26
NSMCE1-208ENST00000565070 PCDHA3Q9Y5H8 950 aa13.4□□□□□ -0.26
NSMCE1-208ENST00000565070 CEP290O15078 2479 aa13.39□□□□□ -0.27
NSMCE1-208ENST00000565070 TMEM110-MUSTN1A8MSY1 372 aa13.39□□□□□ -0.27
NSMCE1-208ENST00000565070 B3GAT3O94766 335 aa13.39□□□□□ -0.27
NSMCE1-208ENST00000565070 LSM8O95777 96 aaKnown RBP13.39□□□□□ -0.27
NSMCE1-208ENST00000565070 OR1G1P47890 313 aa13.39□□□□□ -0.27
NSMCE1-208ENST00000565070 MARCKSL1P49006 195 aa13.39□□□□□ -0.27
NSMCE1-208ENST00000565070 YWHAEP62258 255 aaKnown RBP13.39□□□□□ -0.27
NSMCE1-208ENST00000565070 GUCY2DQ02846 1103 aa13.39□□□□□ -0.27
NSMCE1-208ENST00000565070 PTP4A2Q12974 167 aa13.39□□□□□ -0.27
NSMCE1-208ENST00000565070 PPP2R5EQ16537 467 aa13.39□□□□□ -0.27
NSMCE1-208ENST00000565070 SPOUT1Q5T280 376 aaKnown RBP13.39□□□□□ -0.27
NSMCE1-208ENST00000565070 TMCO2Q7Z6W1 182 aaPredicted RBP13.39□□□□□ -0.27
NSMCE1-208ENST00000565070 FIBCD1Q8N539 461 aa13.39□□□□□ -0.27
NSMCE1-208ENST00000565070 CAVIN3Q969G5 261 aa13.39□□□□□ -0.27
NSMCE1-208ENST00000565070 BCO2Q9BYV7 579 aa13.39□□□□□ -0.27
NSMCE1-208ENST00000565070 EPB41L5Q9HCM4 733 aa13.39□□□□□ -0.27
NSMCE1-208ENST00000565070 ANAPC7Q9UJX3 599 aa13.39□□□□□ -0.27
NSMCE1-208ENST00000565070 FAN1Q9Y2M0 1017 aa13.39□□□□□ -0.27
NSMCE1-208ENST00000565070 PDE4DIPQ5VU43 2346 aa13.38□□□□□ -0.27
NSMCE1-208ENST00000565070 KPNA7A9QM74 516 aa13.38□□□□□ -0.27
NSMCE1-208ENST00000565070 TRAPPC3O43617 180 aa13.38□□□□□ -0.27
NSMCE1-208ENST00000565070 SPOPO43791 374 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms