RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 MTF2Q9Y483 593 aaPredicted RBP14.58□□□□□ -0.08
VPS9D1-204ENST00000565023 PTPRDP23468 1912 aa14.58□□□□□ -0.08
VPS9D1-204ENST00000565023 MYH10P35580 1976 aa14.58□□□□□ -0.08
VPS9D1-204ENST00000565023 PTPRZ1P23471 2315 aaPredicted RBP14.58□□□□□ -0.08
VPS9D1-204ENST00000565023 KANSL1LA0AUZ9 987 aa14.57□□□□□ -0.08
VPS9D1-204ENST00000565023 SLC38A8A6NNN8 435 aa14.57□□□□□ -0.08
VPS9D1-204ENST00000565023 KIF20AO95235 890 aa14.57□□□□□ -0.08
VPS9D1-204ENST00000565023 FGF19O95750 216 aa14.57□□□□□ -0.08
VPS9D1-204ENST00000565023 WARSP23381 471 aaKnown RBP14.57□□□□□ -0.08
VPS9D1-204ENST00000565023 BDNFP23560 247 aa14.57□□□□□ -0.08
VPS9D1-204ENST00000565023 NR2F2P24468 414 aa14.57□□□□□ -0.08
VPS9D1-204ENST00000565023 GNL1P36915 607 aaPredicted RBP14.57□□□□□ -0.08
VPS9D1-204ENST00000565023 CDH8P55286 799 aa14.57□□□□□ -0.08
VPS9D1-204ENST00000565023 STARD6P59095 220 aa14.57□□□□□ -0.08
VPS9D1-204ENST00000565023 RPL10AP62906 217 aaKnown RBP14.57□□□□□ -0.08
VPS9D1-204ENST00000565023 PRKCQQ04759 706 aa14.57□□□□□ -0.08
VPS9D1-204ENST00000565023 ANGPT1Q15389 498 aa14.57□□□□□ -0.08
VPS9D1-204ENST00000565023 ZNF699Q32M78 642 aa14.57□□□□□ -0.08
VPS9D1-204ENST00000565023 MDH1BQ5I0G3 518 aa14.57□□□□□ -0.08
VPS9D1-204ENST00000565023 PHLDB3Q6NSJ2 640 aa14.57□□□□□ -0.08
VPS9D1-204ENST00000565023 PJA1Q8NG27 643 aa14.57□□□□□ -0.08
VPS9D1-204ENST00000565023 PARD3BQ8TEW8 1205 aa14.57□□□□□ -0.08
VPS9D1-204ENST00000565023 ZFYVE19Q96K21 471 aa14.57□□□□□ -0.08
VPS9D1-204ENST00000565023 GBP4Q96PP9 640 aa14.57□□□□□ -0.08
VPS9D1-204ENST00000565023 PKMYT1Q99640 499 aa14.57□□□□□ -0.08
VPS9D1-204ENST00000565023 SMYD3Q9H7B4 428 aa14.57□□□□□ -0.08
VPS9D1-204ENST00000565023 TRPC7Q9HCX4 862 aa14.57□□□□□ -0.08
VPS9D1-204ENST00000565023 DMAC2Q9NW81 257 aa14.57□□□□□ -0.08
VPS9D1-204ENST00000565023 MAGEC2Q9UBF1 373 aaPredicted RBP14.57□□□□□ -0.08
VPS9D1-204ENST00000565023 CDH9Q9ULB4 789 aa14.57□□□□□ -0.08
VPS9D1-204ENST00000565023 NDRG2Q9UN36 371 aaKnown RBP14.57□□□□□ -0.08
VPS9D1-204ENST00000565023 FRMD4BQ9Y2L6 1034 aa14.57□□□□□ -0.08
VPS9D1-204ENST00000565023 NME7Q9Y5B8 376 aa14.57□□□□□ -0.08
VPS9D1-204ENST00000565023 VPS13AQ96RL7 3174 aa14.57□□□□□ -0.08
VPS9D1-204ENST00000565023 GREB1Q4ZG55 1949 aa14.56□□□□□ -0.08
VPS9D1-204ENST00000565023 FAM170BA6NMN3 283 aa14.56□□□□□ -0.08
VPS9D1-204ENST00000565023 A8MXQ7 604 aa14.56□□□□□ -0.08
VPS9D1-204ENST00000565023 SMC2O95347 1197 aa14.56□□□□□ -0.08
VPS9D1-204ENST00000565023 PRAMEF12O95522 483 aa14.56□□□□□ -0.08
VPS9D1-204ENST00000565023 CSH1P0DML2 217 aa14.56□□□□□ -0.08
VPS9D1-204ENST00000565023 CSH2P0DML3 217 aa14.56□□□□□ -0.08
VPS9D1-204ENST00000565023 GLULP15104 373 aa14.56□□□□□ -0.08
VPS9D1-204ENST00000565023 HMGA1P17096 107 aaKnown RBP14.56□□□□□ -0.08
VPS9D1-204ENST00000565023 GRIK1P39086 918 aa14.56□□□□□ -0.08
VPS9D1-204ENST00000565023 NUBP1P53384 320 aa14.56□□□□□ -0.08
VPS9D1-204ENST00000565023 IFRD2Q12894 506 aaPredicted RBP14.56□□□□□ -0.08
VPS9D1-204ENST00000565023 NCOA4Q13772 614 aa14.56□□□□□ -0.08
VPS9D1-204ENST00000565023 ZNF667Q5HYK9 610 aa14.56□□□□□ -0.08
VPS9D1-204ENST00000565023 C4orf50Q6ZRC1 276 aa14.56□□□□□ -0.08
VPS9D1-204ENST00000565023 MFSD6LQ8IWD5 586 aa14.56□□□□□ -0.08
VPS9D1-204ENST00000565023 MAB21L3Q8N8X9 362 aa14.56□□□□□ -0.08
VPS9D1-204ENST00000565023 SPATA18Q8TC71 538 aa14.56□□□□□ -0.08
VPS9D1-204ENST00000565023 DEPDC1BQ8WUY9 529 aa14.56□□□□□ -0.08
VPS9D1-204ENST00000565023 IRF7Q92985 503 aa14.56□□□□□ -0.08
VPS9D1-204ENST00000565023 SYAP1Q96A49 352 aaPredicted RBP14.56□□□□□ -0.08
VPS9D1-204ENST00000565023 GSDMAQ96QA5 445 aa14.56□□□□□ -0.08
VPS9D1-204ENST00000565023 DPEP3Q9H4B8 488 aa14.56□□□□□ -0.08
VPS9D1-204ENST00000565023 TASP1Q9H6P5 420 aa14.56□□□□□ -0.08
VPS9D1-204ENST00000565023 LTB4R2Q9NPC1 389 aa14.56□□□□□ -0.08
VPS9D1-204ENST00000565023 RMND1Q9NWS8 449 aa14.56□□□□□ -0.08
VPS9D1-204ENST00000565023 PCDHA5Q9Y5H7 936 aa14.56□□□□□ -0.08
VPS9D1-204ENST00000565023 COL4A2P08572 1712 aa14.55□□□□□ -0.08
VPS9D1-204ENST00000565023 ANAPC1Q9H1A4 1944 aa14.55□□□□□ -0.08
VPS9D1-204ENST00000565023 VNN1O95497 513 aa14.55□□□□□ -0.08
VPS9D1-204ENST00000565023 C4BPAP04003 597 aaKnown RBP14.55□□□□□ -0.08
VPS9D1-204ENST00000565023 TRIM49P0CI25 452 aa14.55□□□□□ -0.08
VPS9D1-204ENST00000565023 TRIM49CP0CI26 452 aa14.55□□□□□ -0.08
VPS9D1-204ENST00000565023 TARSP26639 723 aaKnown RBP14.55□□□□□ -0.08
VPS9D1-204ENST00000565023 PIK3CAP42336 1068 aa14.55□□□□□ -0.08
VPS9D1-204ENST00000565023 NLRP12P59046 1061 aa14.55□□□□□ -0.08
VPS9D1-204ENST00000565023 TXNDC8Q6A555 127 aa14.55□□□□□ -0.08
VPS9D1-204ENST00000565023 ISM2Q6H9L7 571 aa14.55□□□□□ -0.08
VPS9D1-204ENST00000565023 FAM171BQ6P995 826 aa14.55□□□□□ -0.08
VPS9D1-204ENST00000565023 SLC9A9Q8IVB4 645 aa14.55□□□□□ -0.08
VPS9D1-204ENST00000565023 CSGALNACT1Q8TDX6 532 aa14.55□□□□□ -0.08
VPS9D1-204ENST00000565023 MRPS31Q92665 395 aaKnown RBP14.55□□□□□ -0.08
VPS9D1-204ENST00000565023 DNASE1L2Q92874 299 aa14.55□□□□□ -0.08
VPS9D1-204ENST00000565023 EEF2KMTQ96G04 330 aa14.55□□□□□ -0.08
VPS9D1-204ENST00000565023 PCED1BQ96HM7 432 aa14.55□□□□□ -0.08
VPS9D1-204ENST00000565023 LRRC3BQ96PB8 259 aa14.55□□□□□ -0.08
VPS9D1-204ENST00000565023 SLC46A2Q9BY10 475 aa14.55□□□□□ -0.08
VPS9D1-204ENST00000565023 XYLT2Q9H1B5 865 aa14.55□□□□□ -0.08
VPS9D1-204ENST00000565023 IRF2BPLQ9H1B7 796 aa14.55□□□□□ -0.08
VPS9D1-204ENST00000565023 TRPV4Q9HBA0 871 aa14.55□□□□□ -0.08
VPS9D1-204ENST00000565023 ABCB6Q9NP58 842 aa14.55□□□□□ -0.08
VPS9D1-204ENST00000565023 LMBRD1Q9NUN5 540 aa14.55□□□□□ -0.08
VPS9D1-204ENST00000565023 RIF1Q5UIP0 2472 aaKnown RBP14.55□□□□□ -0.08
VPS9D1-204ENST00000565023 DMDP11532 3685 aa14.55□□□□□ -0.08
VPS9D1-204ENST00000565023 CLDN5O00501 218 aa14.54□□□□□ -0.08
VPS9D1-204ENST00000565023 TACC1O75410 805 aa14.54□□□□□ -0.08
VPS9D1-204ENST00000565023 AKAP3O75969 853 aa14.54□□□□□ -0.08
VPS9D1-204ENST00000565023 F11P03951 625 aa14.54□□□□□ -0.08
VPS9D1-204ENST00000565023 KRT13P13646 458 aa14.54□□□□□ -0.08
VPS9D1-204ENST00000565023 PTPN1P18031 435 aaKnown RBP14.54□□□□□ -0.08
VPS9D1-204ENST00000565023 ANXA13P27216 316 aa14.54□□□□□ -0.08
VPS9D1-204ENST00000565023 ATICP31939 592 aa14.54□□□□□ -0.08
VPS9D1-204ENST00000565023 AVPR1AP37288 418 aa14.54□□□□□ -0.08
VPS9D1-204ENST00000565023 SOX9P48436 509 aa14.54□□□□□ -0.08
VPS9D1-204ENST00000565023 GCLMP48507 274 aa14.54□□□□□ -0.08
VPS9D1-204ENST00000565023 VAMP7P51809 220 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms