RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 CCL26Q9Y258 94 aa10.75□□□□□ -0.69
CMTM3-209ENST00000565003 R3HCC1Q9Y3T6 440 aaKnown RBP10.75□□□□□ -0.69
CMTM3-209ENST00000565003 GVINP1Q7Z2Y8 2422 aa10.75□□□□□ -0.69
CMTM3-209ENST00000565003 KIF26AQ9ULI4 1882 aaPredicted RBP10.74□□□□□ -0.69
CMTM3-209ENST00000565003 DENND4CQ5VZ89 1909 aa10.74□□□□□ -0.69
CMTM3-209ENST00000565003 NCAM2O15394 837 aa10.74□□□□□ -0.69
CMTM3-209ENST00000565003 EXOC3O60645 756 aa10.74□□□□□ -0.69
CMTM3-209ENST00000565003 NOL4O94818 638 aa10.74□□□□□ -0.69
CMTM3-209ENST00000565003 CSH1P0DML2 217 aa10.74□□□□□ -0.69
CMTM3-209ENST00000565003 CSH2P0DML3 217 aa10.74□□□□□ -0.69
CMTM3-209ENST00000565003 WARSP23381 471 aaKnown RBP10.74□□□□□ -0.69
CMTM3-209ENST00000565003 CASP4P49662 377 aa10.74□□□□□ -0.69
CMTM3-209ENST00000565003 KRT85P78386 507 aa10.74□□□□□ -0.69
CMTM3-209ENST00000565003 CSTF1Q05048 431 aaKnown RBP10.74□□□□□ -0.69
CMTM3-209ENST00000565003 TNK2Q07912 1038 aa10.74□□□□□ -0.69
CMTM3-209ENST00000565003 ARHGAP29Q52LW3 1261 aa10.74□□□□□ -0.69
CMTM3-209ENST00000565003 WDR44Q5JSH3 913 aa10.74□□□□□ -0.69
CMTM3-209ENST00000565003 TXNDC8Q6A555 127 aa10.74□□□□□ -0.69
CMTM3-209ENST00000565003 ZC3H14Q6PJT7 736 aaKnown RBP10.74□□□□□ -0.69
CMTM3-209ENST00000565003 TXNDC11Q6PKC3 985 aa10.74□□□□□ -0.69
CMTM3-209ENST00000565003 TSSK4Q6SA08 328 aa10.74□□□□□ -0.69
CMTM3-209ENST00000565003 SPATA2LQ8IUW3 424 aaPredicted RBP10.74□□□□□ -0.69
CMTM3-209ENST00000565003 CMTM8Q8IZV2 173 aa10.74□□□□□ -0.69
CMTM3-209ENST00000565003 ADSSL1Q8N142 457 aa10.74□□□□□ -0.69
CMTM3-209ENST00000565003 MAB21L3Q8N8X9 362 aa10.74□□□□□ -0.69
CMTM3-209ENST00000565003 TTC8Q8TAM2 541 aa10.74□□□□□ -0.69
CMTM3-209ENST00000565003 RIN3Q8TB24 985 aa10.74□□□□□ -0.69
CMTM3-209ENST00000565003 BPIFB1Q8TDL5 484 aa10.74□□□□□ -0.69
CMTM3-209ENST00000565003 CSGALNACT1Q8TDX6 532 aa10.74□□□□□ -0.69
CMTM3-209ENST00000565003 MYLPFQ96A32 169 aa10.74□□□□□ -0.69
CMTM3-209ENST00000565003 FUBP3Q96I24 572 aaKnown RBP eCLIP10.74□□□□□ -0.69
CMTM3-209ENST00000565003 MMS19Q96T76 1030 aa10.74□□□□□ -0.69
CMTM3-209ENST00000565003 MRPL45Q9BRJ2 306 aaKnown RBP10.74□□□□□ -0.69
CMTM3-209ENST00000565003 XYLT2Q9H1B5 865 aa10.74□□□□□ -0.69
CMTM3-209ENST00000565003 CHRDQ9H2X0 955 aa10.74□□□□□ -0.69
CMTM3-209ENST00000565003 KCTD10Q9H3F6 313 aa10.74□□□□□ -0.69
CMTM3-209ENST00000565003 PRMT8Q9NR22 394 aaPredicted RBP10.74□□□□□ -0.69
CMTM3-209ENST00000565003 CGNQ9P2M7 1197 aaKnown RBP10.74□□□□□ -0.69
CMTM3-209ENST00000565003 FBXO4Q9UKT5 387 aa10.74□□□□□ -0.69
CMTM3-209ENST00000565003 CDH9Q9ULB4 789 aa10.74□□□□□ -0.69
CMTM3-209ENST00000565003 GPR179Q6PRD1 2367 aa10.73□□□□□ -0.69
CMTM3-209ENST00000565003 EP300Q09472 2414 aaPredicted RBP10.73□□□□□ -0.69
CMTM3-209ENST00000565003 SPECC1L-ADORA2AF8WAN1 911 aa10.73□□□□□ -0.69
CMTM3-209ENST00000565003 LMNAP02545 664 aaKnown RBP10.73□□□□□ -0.69
CMTM3-209ENST00000565003 PDGFRBP09619 1106 aa10.73□□□□□ -0.69
CMTM3-209ENST00000565003 PRR29P0C7W0 189 aa10.73□□□□□ -0.69
CMTM3-209ENST00000565003 CHRNB1P11230 501 aa10.73□□□□□ -0.69
CMTM3-209ENST00000565003 CTHP32929 405 aa10.73□□□□□ -0.69
CMTM3-209ENST00000565003 SYKP43405 635 aa10.73□□□□□ -0.69
CMTM3-209ENST00000565003 NDUFA8P51970 172 aa10.73□□□□□ -0.69
CMTM3-209ENST00000565003 KPNA1P52294 538 aaPredicted RBP10.73□□□□□ -0.69
CMTM3-209ENST00000565003 MYL6P60660 151 aa10.73□□□□□ -0.69
CMTM3-209ENST00000565003 RPL10AP62906 217 aaKnown RBP10.73□□□□□ -0.69
CMTM3-209ENST00000565003 ZNF528Q3MIS6 628 aa10.73□□□□□ -0.69
CMTM3-209ENST00000565003 WDR72Q3MJ13 1102 aa10.73□□□□□ -0.69
CMTM3-209ENST00000565003 TDRD10Q5VZ19 366 aaKnown RBP10.73□□□□□ -0.69
CMTM3-209ENST00000565003 C4orf50Q6ZRC1 276 aa10.73□□□□□ -0.69
CMTM3-209ENST00000565003 SCN4BQ8IWT1 228 aa10.73□□□□□ -0.69
CMTM3-209ENST00000565003 CELF5Q8N6W0 485 aaKnown RBP10.73□□□□□ -0.69
CMTM3-209ENST00000565003 MRPS31Q92665 395 aaKnown RBP10.73□□□□□ -0.69
CMTM3-209ENST00000565003 USP13Q92995 863 aaPredicted RBP10.73□□□□□ -0.69
CMTM3-209ENST00000565003 TRMT2BQ96GJ1 504 aaKnown RBP10.73□□□□□ -0.69
CMTM3-209ENST00000565003 PCED1BQ96HM7 432 aa10.73□□□□□ -0.69
CMTM3-209ENST00000565003 MYRFLQ96LU7 910 aa10.73□□□□□ -0.69
CMTM3-209ENST00000565003 SEMA4AQ9H3S1 761 aa10.73□□□□□ -0.69
CMTM3-209ENST00000565003 C8orf33Q9H7E9 229 aaPredicted RBP10.73□□□□□ -0.69
CMTM3-209ENST00000565003 LMAN1LQ9HAT1 526 aa10.73□□□□□ -0.69
CMTM3-209ENST00000565003 RBM12Q9NTZ6 932 aaKnown RBP10.73□□□□□ -0.69
CMTM3-209ENST00000565003 DMAC2Q9NW81 257 aa10.73□□□□□ -0.69
CMTM3-209ENST00000565003 USP25Q9UHP3 1055 aa10.73□□□□□ -0.69
CMTM3-209ENST00000565003 ZMYM5Q9UJ78 669 aa10.73□□□□□ -0.69
CMTM3-209ENST00000565003 PTPRDP23468 1912 aa10.72□□□□□ -0.69
CMTM3-209ENST00000565003 OTOGLQ3ZCN5 2332 aa10.72□□□□□ -0.69
CMTM3-209ENST00000565003 FAM237AA0A1B0GTK4 181 aa10.72□□□□□ -0.69
CMTM3-209ENST00000565003 LRRIQ3A6PVS8 624 aaPredicted RBP10.72□□□□□ -0.69
CMTM3-209ENST00000565003 TACC1O75410 805 aa10.72□□□□□ -0.69
CMTM3-209ENST00000565003 STAU1O95793 577 aaKnown RBP10.72□□□□□ -0.69
CMTM3-209ENST00000565003 RPN1P04843 607 aaKnown RBP10.72□□□□□ -0.69
CMTM3-209ENST00000565003 MYL1P05976 194 aa10.72□□□□□ -0.69
CMTM3-209ENST00000565003 BDNFP23560 247 aa10.72□□□□□ -0.69
CMTM3-209ENST00000565003 DDX6P26196 483 aaKnown RBP eCLIP10.72□□□□□ -0.69
CMTM3-209ENST00000565003 GNL1P36915 607 aaPredicted RBP10.72□□□□□ -0.69
CMTM3-209ENST00000565003 AVPR1AP37288 418 aa10.72□□□□□ -0.69
CMTM3-209ENST00000565003 MAGEA11P43364 429 aa10.72□□□□□ -0.69
CMTM3-209ENST00000565003 MLLT6P55198 1093 aaPredicted RBP10.72□□□□□ -0.69
CMTM3-209ENST00000565003 TNNC1P63316 161 aa10.72□□□□□ -0.69
CMTM3-209ENST00000565003 CLDN10P78369 228 aa10.72□□□□□ -0.69
CMTM3-209ENST00000565003 PLCB2Q00722 1185 aa10.72□□□□□ -0.69
CMTM3-209ENST00000565003 CYP27A1Q02318 531 aa10.72□□□□□ -0.69
CMTM3-209ENST00000565003 PSMD2Q13200 908 aa10.72□□□□□ -0.69
CMTM3-209ENST00000565003 GAS6Q14393 721 aa10.72□□□□□ -0.69
CMTM3-209ENST00000565003 MAPRE1Q15691 268 aaKnown RBP10.72□□□□□ -0.69
CMTM3-209ENST00000565003 MDH1BQ5I0G3 518 aa10.72□□□□□ -0.69
CMTM3-209ENST00000565003 VSTM1Q6UX27 236 aa10.72□□□□□ -0.69
CMTM3-209ENST00000565003 MON1AQ86VX9 555 aa10.72□□□□□ -0.69
CMTM3-209ENST00000565003 RALGPS2Q86X27 583 aaPredicted RBP10.72□□□□□ -0.69
CMTM3-209ENST00000565003 SLC9A9Q8IVB4 645 aa10.72□□□□□ -0.69
CMTM3-209ENST00000565003 SUMF1Q8NBK3 374 aa10.72□□□□□ -0.69
CMTM3-209ENST00000565003 OR6B3Q8NGW1 331 aa10.72□□□□□ -0.69
CMTM3-209ENST00000565003 GOLGA5Q8TBA6 731 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms