RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 TMEM191BP0C7N4 346 aa7.68□□□□□ -1.18
HERPUD1-209ENST00000564678 RARAP10276 462 aa7.68□□□□□ -1.18
HERPUD1-209ENST00000564678 CETPP11597 493 aa7.68□□□□□ -1.18
HERPUD1-209ENST00000564678 HARSP12081 509 aaKnown RBP7.68□□□□□ -1.18
HERPUD1-209ENST00000564678 YBX3P16989 372 aaKnown RBP eCLIP7.68□□□□□ -1.18
HERPUD1-209ENST00000564678 MMP8P22894 467 aa7.68□□□□□ -1.18
HERPUD1-209ENST00000564678 TMOD1P28289 359 aa7.68□□□□□ -1.18
HERPUD1-209ENST00000564678 CDH5P33151 784 aaPredicted RBP7.68□□□□□ -1.18
HERPUD1-209ENST00000564678 PHKA2P46019 1235 aa7.68□□□□□ -1.18
HERPUD1-209ENST00000564678 EPHB1P54762 984 aa7.68□□□□□ -1.18
HERPUD1-209ENST00000564678 HNRNPH2P55795 449 aaKnown RBP7.68□□□□□ -1.18
HERPUD1-209ENST00000564678 ARHGAP1Q07960 439 aa7.68□□□□□ -1.18
HERPUD1-209ENST00000564678 DHX9Q08211 1270 aaKnown RBP7.68□□□□□ -1.18
HERPUD1-209ENST00000564678 MAMLD1Q13495 774 aa7.68□□□□□ -1.18
HERPUD1-209ENST00000564678 SEPT6Q14141 434 aa7.68□□□□□ -1.18
HERPUD1-209ENST00000564678 UAP1Q16222 522 aaPredicted RBP7.68□□□□□ -1.18
HERPUD1-209ENST00000564678 CEP85LQ5SZL2 805 aa7.68□□□□□ -1.18
HERPUD1-209ENST00000564678 TAPT1Q6NXT6 567 aa7.68□□□□□ -1.18
HERPUD1-209ENST00000564678 MAMDC4Q6UXC1 1216 aa7.68□□□□□ -1.18
HERPUD1-209ENST00000564678 KDM7AQ6ZMT4 941 aa7.68□□□□□ -1.18
HERPUD1-209ENST00000564678 THNSL2Q86YJ6 484 aa7.68□□□□□ -1.18
HERPUD1-209ENST00000564678 RHOT1Q8IXI2 618 aa7.68□□□□□ -1.18
HERPUD1-209ENST00000564678 CCDC105Q8IYK2 499 aa7.68□□□□□ -1.18
HERPUD1-209ENST00000564678 ZDHHC14Q8IZN3 488 aa7.68□□□□□ -1.18
HERPUD1-209ENST00000564678 TMEM35BQ8NCS4 154 aa7.68□□□□□ -1.18
HERPUD1-209ENST00000564678 PPTC7Q8NI37 304 aa7.68□□□□□ -1.18
HERPUD1-209ENST00000564678 FEZF2Q8TBJ5 459 aa7.68□□□□□ -1.18
HERPUD1-209ENST00000564678 GRK7Q8WTQ7 553 aa7.68□□□□□ -1.18
HERPUD1-209ENST00000564678 ELMO3Q96BJ8 720 aa7.68□□□□□ -1.18
HERPUD1-209ENST00000564678 TRIM51Q9BSJ1 452 aa7.68□□□□□ -1.18
HERPUD1-209ENST00000564678 INO80BQ9C086 356 aaPredicted RBP7.68□□□□□ -1.18
HERPUD1-209ENST00000564678 TSPYL1Q9H0U9 437 aa7.68□□□□□ -1.18
HERPUD1-209ENST00000564678 DPH5Q9H2P9 285 aa7.68□□□□□ -1.18
HERPUD1-209ENST00000564678 RPF1Q9H9Y2 349 aaKnown RBP7.68□□□□□ -1.18
HERPUD1-209ENST00000564678 EFCC1Q9HA90 598 aa7.68□□□□□ -1.18
HERPUD1-209ENST00000564678 IP6K2Q9UHH9 426 aa7.68□□□□□ -1.18
HERPUD1-209ENST00000564678 ZHX1Q9UKY1 873 aaPredicted RBP7.68□□□□□ -1.18
HERPUD1-209ENST00000564678 PASKQ96RG2 1323 aa7.68□□□□□ -1.18
HERPUD1-209ENST00000564678 EVPLQ92817 2033 aa7.68□□□□□ -1.18
HERPUD1-209ENST00000564678 SRRM3A6NNA2 597 aaPredicted RBP7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 C22orf31O95567 290 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 NUDT17P0C025 328 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 MCF2P10911 925 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 INSRRP14616 1297 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 SOX9P48436 509 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 IRAK1P51617 712 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 GTF2A2P52657 109 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 MYL6P60660 151 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 FKBP1BP68106 108 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 MBTD1Q05BQ5 628 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 SLMAPQ14BN4 828 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 ZNF568Q3ZCX4 644 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 SEZ6Q53EL9 994 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 SGO2Q562F6 1265 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 AGBL2Q5U5Z8 902 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 LRRC38Q5VT99 294 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 AADACL2Q6P093 401 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 ADAT2Q7Z6V5 191 aaKnown RBP7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 KATNAL2Q8IYT4 538 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 LINC01465Q8N7H1 131 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 EXD1Q8NHP7 514 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 UBLCP1Q8WVY7 318 aaPredicted RBP7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 COPS5Q92905 334 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 C18orf8Q96DM3 657 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 NLRP4Q96MN2 994 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 MTMR12Q9C0I1 747 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 LHX5Q9H2C1 402 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 RNPEPQ9H4A4 650 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 ASB7Q9H672 318 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 CASS4Q9NQ75 786 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 PDGFCQ9NRA1 345 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 CISHQ9NSE2 258 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 ZIM2Q9NZV7 527 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 MORF4L1Q9UBU8 362 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 CEP83Q9Y592 693 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 TLR3O15455 904 aaKnown RBP7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 MED7O43513 233 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 ECEL1O95672 775 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 LGALS2P05162 132 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 PAEPP09466 180 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 ITIH2P19823 946 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 ADORA2AP29274 412 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 ATICP31939 592 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 FLT3P36888 993 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 PLTPP55058 493 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 TFAMQ00059 246 aaKnown RBP7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 CDC42EP1Q00587 391 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 ZNF699Q32M78 642 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 ZNF280DQ6N043 979 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 TTC27Q6P3X3 843 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 LRRC31Q6UY01 552 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 ANKRD23Q86SG2 305 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 THNSL1Q8IYQ7 743 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 MYO1HQ8N1T3 1032 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 ATL2Q8NHH9 583 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 ART4Q93070 314 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 FAM84AQ96KN4 292 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 C11orf70Q9BRQ4 267 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 TRIM31Q9BZY9 425 aa7.67□□□□□ -1.18
HERPUD1-209ENST00000564678 XYLT2Q9H1B5 865 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms