RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 TSC2P49815 1807 aa22.44■■□□□ 1.18
HERC2-204ENST00000563945 GALK1P51570 392 aa22.44■■□□□ 1.18
HERC2-204ENST00000563945 RBP5P82980 135 aa22.44■■□□□ 1.18
HERC2-204ENST00000563945 NR1H3Q13133 447 aa22.44■■□□□ 1.18
HERC2-204ENST00000563945 ZNF268Q14587 947 aaPredicted RBP22.44■■□□□ 1.18
HERC2-204ENST00000563945 PKN3Q6P5Z2 889 aa22.44■■□□□ 1.18
HERC2-204ENST00000563945 USP49Q70CQ1 688 aa22.44■■□□□ 1.18
HERC2-204ENST00000563945 SCN4BQ8IWT1 228 aa22.44■■□□□ 1.18
HERC2-204ENST00000563945 LEO1Q8WVC0 666 aaPredicted RBP22.44■■□□□ 1.18
HERC2-204ENST00000563945 DUS2Q9NX74 493 aaKnown RBP22.44■■□□□ 1.18
HERC2-204ENST00000563945 GTF3C4Q9UKN8 822 aa22.44■■□□□ 1.18
HERC2-204ENST00000563945 ITGA11Q9UKX5 1188 aa22.44■■□□□ 1.18
HERC2-204ENST00000563945 L1RE1Q9UN81 338 aa22.44■■□□□ 1.18
HERC2-204ENST00000563945 SNX9Q9Y5X1 595 aa22.44■■□□□ 1.18
HERC2-204ENST00000563945 KIF26AQ9ULI4 1882 aaPredicted RBP22.43■■□□□ 1.18
HERC2-204ENST00000563945 TRAV19A0A0A6YYK7 116 aa22.43■■□□□ 1.18
HERC2-204ENST00000563945 MYMKA6NI61 221 aa22.43■■□□□ 1.18
HERC2-204ENST00000563945 EGFP01133 1207 aa22.43■■□□□ 1.18
HERC2-204ENST00000563945 ZNF806P0C7X5 589 aa22.43■■□□□ 1.18
HERC2-204ENST00000563945 HOXC13P31276 330 aa22.43■■□□□ 1.18
HERC2-204ENST00000563945 FAM160A1Q05DH4 1040 aa22.43■■□□□ 1.18
HERC2-204ENST00000563945 PSMD2Q13200 908 aa22.43■■□□□ 1.18
HERC2-204ENST00000563945 ALCAMQ13740 583 aa22.43■■□□□ 1.18
HERC2-204ENST00000563945 MTF1Q14872 753 aa22.43■■□□□ 1.18
HERC2-204ENST00000563945 SF3A2Q15428 464 aaKnown RBP22.43■■□□□ 1.18
HERC2-204ENST00000563945 INTS6LQ5JSJ4 861 aaKnown RBP22.43■■□□□ 1.18
HERC2-204ENST00000563945 CCDC73Q6ZRK6 1079 aa22.43■■□□□ 1.18
HERC2-204ENST00000563945 KBTBD6Q86V97 674 aa22.43■■□□□ 1.18
HERC2-204ENST00000563945 C1orf127Q8N9H9 656 aa22.43■■□□□ 1.18
HERC2-204ENST00000563945 STKLD1Q8NE28 680 aa22.43■■□□□ 1.18
HERC2-204ENST00000563945 SRPRBQ9Y5M8 271 aaKnown RBP22.43■■□□□ 1.18
HERC2-204ENST00000563945 GOLGA8IPA6NC78 632 aa22.42■■□□□ 1.18
HERC2-204ENST00000563945 GOLGA8JA6NMD2 632 aa22.42■■□□□ 1.18
HERC2-204ENST00000563945 PPP1R37O75864 691 aa22.42■■□□□ 1.18
HERC2-204ENST00000563945 AKAP3O75969 853 aa22.42■■□□□ 1.18
HERC2-204ENST00000563945 EPN2O95208 641 aa22.42■■□□□ 1.18
HERC2-204ENST00000563945 KCNA1Q09470 495 aa22.42■■□□□ 1.18
HERC2-204ENST00000563945 MYO1EQ12965 1108 aa22.42■■□□□ 1.18
HERC2-204ENST00000563945 CCDC6Q16204 474 aa22.42■■□□□ 1.18
HERC2-204ENST00000563945 CCDC26Q8TAB7 109 aa22.42■■□□□ 1.18
HERC2-204ENST00000563945 SPATA18Q8TC71 538 aa22.42■■□□□ 1.18
HERC2-204ENST00000563945 ATP2A3Q93084 1043 aa22.42■■□□□ 1.18
HERC2-204ENST00000563945 TRMT2BQ96GJ1 504 aaKnown RBP22.42■■□□□ 1.18
HERC2-204ENST00000563945 ANKRD36BP1Q96IX9 119 aa22.42■■□□□ 1.18
HERC2-204ENST00000563945 STRA6Q9BX79 667 aa22.42■■□□□ 1.18
HERC2-204ENST00000563945 TMEM206Q9H813 350 aa22.42■■□□□ 1.18
HERC2-204ENST00000563945 ECT2Q9H8V3 914 aa22.42■■□□□ 1.18
HERC2-204ENST00000563945 CLIC4Q9Y696 253 aa22.42■■□□□ 1.18
HERC2-204ENST00000563945 ATG2BQ96BY7 2078 aa22.42■■□□□ 1.18
HERC2-204ENST00000563945 OTOL1A6NHN0 477 aaPredicted RBP22.41■■□□□ 1.18
HERC2-204ENST00000563945 NOL4O94818 638 aa22.41■■□□□ 1.18
HERC2-204ENST00000563945 GJA4P35212 333 aa22.41■■□□□ 1.18
HERC2-204ENST00000563945 KCNB1Q14721 858 aa22.41■■□□□ 1.18
HERC2-204ENST00000563945 ELF2Q15723 593 aa22.41■■□□□ 1.18
HERC2-204ENST00000563945 C4orf50Q6ZRC1 276 aa22.41■■□□□ 1.18
HERC2-204ENST00000563945 ADGRF2Q8IZF7 708 aa22.41■■□□□ 1.18
HERC2-204ENST00000563945 TOP6BLQ8N6T0 577 aa22.41■■□□□ 1.18
HERC2-204ENST00000563945 OSCP1Q8WVF1 389 aa22.41■■□□□ 1.18
HERC2-204ENST00000563945 CD101Q93033 1021 aa22.41■■□□□ 1.18
HERC2-204ENST00000563945 ACDQ96AP0 544 aa22.41■■□□□ 1.18
HERC2-204ENST00000563945 CHFRQ96EP1 664 aa22.41■■□□□ 1.18
HERC2-204ENST00000563945 CYP2S1Q96SQ9 504 aa22.41■■□□□ 1.18
HERC2-204ENST00000563945 PCIF1Q9H4Z3 704 aa22.41■■□□□ 1.18
HERC2-204ENST00000563945 GDAP2Q9NXN4 497 aa22.41■■□□□ 1.18
HERC2-204ENST00000563945 PCDHGA5Q9Y5G8 931 aa22.41■■□□□ 1.18
HERC2-204ENST00000563945 RHOBTB1O94844 696 aa22.4■■□□□ 1.18
HERC2-204ENST00000563945 TNNC2P02585 160 aa22.4■■□□□ 1.18
HERC2-204ENST00000563945 STAT6P42226 847 aa22.4■■□□□ 1.18
HERC2-204ENST00000563945 RAP1GAPP47736 663 aa22.4■■□□□ 1.18
HERC2-204ENST00000563945 PDE6CP51160 858 aa22.4■■□□□ 1.18
HERC2-204ENST00000563945 LIMK1P53667 647 aa22.4■■□□□ 1.18
HERC2-204ENST00000563945 CEBPZQ03701 1054 aaKnown RBP22.4■■□□□ 1.18
HERC2-204ENST00000563945 ST3GAL2Q16842 350 aa22.4■■□□□ 1.18
HERC2-204ENST00000563945 STXBP4Q6ZWJ1 553 aa22.4■■□□□ 1.18
HERC2-204ENST00000563945 RPLP0P6Q8NHW5 317 aa22.4■■□□□ 1.18
HERC2-204ENST00000563945 DNAJC19Q96DA6 116 aa22.4■■□□□ 1.18
HERC2-204ENST00000563945 FUBP3Q96I24 572 aaKnown RBP eCLIP22.4■■□□□ 1.18
HERC2-204ENST00000563945 MYRFLQ96LU7 910 aa22.4■■□□□ 1.18
HERC2-204ENST00000563945 HHIPQ96QV1 700 aa22.4■■□□□ 1.18
HERC2-204ENST00000563945 FBRSL1Q9HCM7 1045 aaKnown RBP22.4■■□□□ 1.18
HERC2-204ENST00000563945 PDE11AQ9HCR9 933 aa22.4■■□□□ 1.18
HERC2-204ENST00000563945 OLFML3Q9NRN5 406 aa22.4■■□□□ 1.18
HERC2-204ENST00000563945 PANK4Q9NVE7 773 aa22.4■■□□□ 1.18
HERC2-204ENST00000563945 MAGEC2Q9UBF1 373 aaPredicted RBP22.4■■□□□ 1.18
HERC2-204ENST00000563945 CNOT1A5YKK6 2376 aaKnown RBP22.39■■□□□ 1.18
HERC2-204ENST00000563945 KRT37O76014 449 aa22.39■■□□□ 1.17
HERC2-204ENST00000563945 APBB3O95704 486 aa22.39■■□□□ 1.17
HERC2-204ENST00000563945 HDCP19113 662 aa22.39■■□□□ 1.17
HERC2-204ENST00000563945 SURF1Q15526 300 aa22.39■■□□□ 1.17
HERC2-204ENST00000563945 MAPRE1Q15691 268 aaKnown RBP22.39■■□□□ 1.17
HERC2-204ENST00000563945 CFAP221Q4G0U5 840 aa22.39■■□□□ 1.17
HERC2-204ENST00000563945 ARL14EPQ8N8R7 260 aaPredicted RBP22.39■■□□□ 1.17
HERC2-204ENST00000563945 ZC3H10Q96K80 434 aaKnown RBP22.39■■□□□ 1.17
HERC2-204ENST00000563945 CLIC6Q96NY7 704 aa22.39■■□□□ 1.17
HERC2-204ENST00000563945 PANK2Q9BZ23 570 aa22.39■■□□□ 1.17
HERC2-204ENST00000563945 VPS45Q9NRW7 570 aa22.39■■□□□ 1.17
HERC2-204ENST00000563945 FBXO2Q9UK22 296 aaPredicted RBP22.39■■□□□ 1.17
HERC2-204ENST00000563945 WNT6Q9Y6F9 365 aa22.39■■□□□ 1.17
HERC2-204ENST00000563945 SPAG17Q6Q759 2223 aa22.39■■□□□ 1.17
HERC2-204ENST00000563945 KIAA0391O15091 583 aaKnown RBP22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms