RNA–Protein interactions for RNA: ENST00000562523.1

NIP7-204, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 3

Gene NIP7, Length 760 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-204ENST00000562523 LDLRAD3Q86YD5 345 aa5.03□□□□□ -1.6
NIP7-204ENST00000562523 D2HGDHQ8N465 521 aa5.03□□□□□ -1.6
NIP7-204ENST00000562523 CLIP3Q96DZ5 547 aa5.03□□□□□ -1.6
NIP7-204ENST00000562523 TEX13BQ9BXU2 312 aa5.03□□□□□ -1.6
NIP7-204ENST00000562523 CRNKL1Q9BZJ0 848 aaKnown RBP5.03□□□□□ -1.6
NIP7-204ENST00000562523 UPF3AQ9H1J1 476 aaKnown RBP5.03□□□□□ -1.6
NIP7-204ENST00000562523 NELFAQ9H3P2 528 aa5.03□□□□□ -1.6
NIP7-204ENST00000562523 VCPKMTQ9H867 229 aa5.03□□□□□ -1.6
NIP7-204ENST00000562523 INCENPQ9NQS7 918 aa5.03□□□□□ -1.6
NIP7-204ENST00000562523 CATSPERZQ9NTU4 200 aa5.03□□□□□ -1.6
NIP7-204ENST00000562523 FBXO28Q9NVF7 368 aa5.03□□□□□ -1.6
NIP7-204ENST00000562523 MCM9Q9NXL9 1143 aa5.03□□□□□ -1.6
NIP7-204ENST00000562523 GALNT8Q9NY28 637 aa5.03□□□□□ -1.6
NIP7-204ENST00000562523 GIT1Q9Y2X7 761 aa5.03□□□□□ -1.6
NIP7-204ENST00000562523 ATP23Q9Y6H3 246 aa5.03□□□□□ -1.6
NIP7-204ENST00000562523 C5orf42Q9H799 3197 aa5.03□□□□□ -1.6
NIP7-204ENST00000562523 CNOT1A5YKK6 2376 aaKnown RBP5.02□□□□□ -1.61
NIP7-204ENST00000562523 KIAA1671Q9BY89 1806 aa5.02□□□□□ -1.61
NIP7-204ENST00000562523 TNKSO95271 1327 aa5.02□□□□□ -1.61
NIP7-204ENST00000562523 RAD50Q92878 1312 aa5.02□□□□□ -1.61
NIP7-204ENST00000562523 MAP1BP46821 2468 aaKnown RBP5.02□□□□□ -1.61
NIP7-204ENST00000562523 CFAP54Q96N23 3096 aa5.02□□□□□ -1.61
NIP7-204ENST00000562523 XIRP2A4UGR9 3374 aa5.02□□□□□ -1.61
NIP7-204ENST00000562523 PNMA6EA0A0J9YXQ4 647 aa5.02□□□□□ -1.61
NIP7-204ENST00000562523 TMEM221A6NGB7 291 aa5.02□□□□□ -1.61
NIP7-204ENST00000562523 CAPN14A8MX76 684 aa5.02□□□□□ -1.61
NIP7-204ENST00000562523 M0R296 226 aa5.02□□□□□ -1.61
NIP7-204ENST00000562523 VWA5AO00534 786 aa5.02□□□□□ -1.61
NIP7-204ENST00000562523 ADCY6O43306 1168 aa5.02□□□□□ -1.61
NIP7-204ENST00000562523 LPXNO60711 386 aa5.02□□□□□ -1.61
NIP7-204ENST00000562523 RAMP2O60895 175 aa5.02□□□□□ -1.61
NIP7-204ENST00000562523 ZBED4O75132 1171 aa5.02□□□□□ -1.61
NIP7-204ENST00000562523 SNAI1O95863 264 aaPredicted RBP5.02□□□□□ -1.61
NIP7-204ENST00000562523 MYL3P08590 195 aa5.02□□□□□ -1.61
NIP7-204ENST00000562523 CYP2D6P10635 497 aa5.02□□□□□ -1.61
NIP7-204ENST00000562523 CYP2C9P11712 490 aa5.02□□□□□ -1.61
NIP7-204ENST00000562523 AKR1B1P15121 316 aa5.02□□□□□ -1.61
NIP7-204ENST00000562523 KRT15P19012 456 aa5.02□□□□□ -1.61
NIP7-204ENST00000562523 IL13RA1P78552 427 aa5.02□□□□□ -1.61
NIP7-204ENST00000562523 PAK1Q13153 545 aa5.02□□□□□ -1.61
NIP7-204ENST00000562523 PCOLCEQ15113 449 aa5.02□□□□□ -1.61
NIP7-204ENST00000562523 SF3A1Q15459 793 aaKnown RBP5.02□□□□□ -1.61
NIP7-204ENST00000562523 GPR19Q15760 415 aa5.02□□□□□ -1.61
NIP7-204ENST00000562523 CLUL1Q15846 466 aa5.02□□□□□ -1.61
NIP7-204ENST00000562523 FAM83BQ5T0W9 1011 aa5.02□□□□□ -1.61
NIP7-204ENST00000562523 CXXC5Q7LFL8 322 aaKnown RBP5.02□□□□□ -1.61
NIP7-204ENST00000562523 CPXCR1Q8N123 301 aa5.02□□□□□ -1.61
NIP7-204ENST00000562523 OR14K1Q8NGZ2 314 aa5.02□□□□□ -1.61
NIP7-204ENST00000562523 SDR42E1Q8WUS8 393 aa5.02□□□□□ -1.61
NIP7-204ENST00000562523 ANKS1AQ92625 1134 aa5.02□□□□□ -1.61
NIP7-204ENST00000562523 PABPC5Q96DU9 382 aaKnown RBP5.02□□□□□ -1.61
NIP7-204ENST00000562523 MRPL38Q96DV4 380 aaKnown RBP5.02□□□□□ -1.61
NIP7-204ENST00000562523 DYNLL2Q96FJ2 89 aa5.02□□□□□ -1.61
NIP7-204ENST00000562523 SLF1Q9BQI6 1058 aa5.02□□□□□ -1.61
NIP7-204ENST00000562523 CCDC8Q9H0W5 538 aaPredicted RBP5.02□□□□□ -1.61
NIP7-204ENST00000562523 ALDH8A1Q9H2A2 487 aaPredicted RBP5.02□□□□□ -1.61
NIP7-204ENST00000562523 GPR108Q9NPR9 543 aa5.02□□□□□ -1.61
NIP7-204ENST00000562523 ARHGEF4Q9NR80 690 aa5.02□□□□□ -1.61
NIP7-204ENST00000562523 SLC2A4RGQ9NR83 387 aa5.02□□□□□ -1.61
NIP7-204ENST00000562523 TRMT13Q9NUP7 481 aaKnown RBP5.02□□□□□ -1.61
NIP7-204ENST00000562523 PARPBPQ9NWS1 579 aa5.02□□□□□ -1.61
NIP7-204ENST00000562523 SWAP70Q9UH65 585 aa5.02□□□□□ -1.61
NIP7-204ENST00000562523 FBXO40Q9UH90 709 aa5.02□□□□□ -1.61
NIP7-204ENST00000562523 SRPK3Q9UPE1 567 aa5.02□□□□□ -1.61
NIP7-204ENST00000562523 TMX2Q9Y320 296 aa5.02□□□□□ -1.61
NIP7-204ENST00000562523 NCOR2Q9Y618 2525 aa5.01□□□□□ -1.61
NIP7-204ENST00000562523 WDR87Q6ZQQ6 2873 aa5.01□□□□□ -1.61
NIP7-204ENST00000562523 TRAV20A0A0B4J274 112 aa5.01□□□□□ -1.61
NIP7-204ENST00000562523 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.01□□□□□ -1.61
NIP7-204ENST00000562523 LCHNA4D1U4 455 aa5.01□□□□□ -1.61
NIP7-204ENST00000562523 PRAMEF25A6NGN4 478 aa5.01□□□□□ -1.61
NIP7-204ENST00000562523 ASB14A6NK59 587 aa5.01□□□□□ -1.61
NIP7-204ENST00000562523 NCK2O43639 380 aa5.01□□□□□ -1.61
NIP7-204ENST00000562523 EFCAB14O75071 495 aa5.01□□□□□ -1.61
NIP7-204ENST00000562523 SURF6O75683 361 aaKnown RBP5.01□□□□□ -1.61
NIP7-204ENST00000562523 IQCF3P0C7M6 154 aa5.01□□□□□ -1.61
NIP7-204ENST00000562523 EEF2P13639 858 aaKnown RBP5.01□□□□□ -1.61
NIP7-204ENST00000562523 CPT1AP50416 773 aa5.01□□□□□ -1.61
NIP7-204ENST00000562523 ERVK-21P61565 698 aa5.01□□□□□ -1.61
NIP7-204ENST00000562523 WDR5P61964 334 aaKnown RBP5.01□□□□□ -1.61
NIP7-204ENST00000562523 GABPAQ06546 454 aa5.01□□□□□ -1.61
NIP7-204ENST00000562523 SLFN5Q08AF3 891 aa5.01□□□□□ -1.61
NIP7-204ENST00000562523 TCF15Q12870 199 aa5.01□□□□□ -1.61
NIP7-204ENST00000562523 EIF4HQ15056 248 aaKnown RBP5.01□□□□□ -1.61
NIP7-204ENST00000562523 KRTAP15-1Q3LI76 137 aa5.01□□□□□ -1.61
NIP7-204ENST00000562523 HERC4Q5GLZ8 1057 aaPredicted RBP5.01□□□□□ -1.61
NIP7-204ENST00000562523 SDE2Q6IQ49 451 aa5.01□□□□□ -1.61
NIP7-204ENST00000562523 ZNF627Q7L945 461 aa5.01□□□□□ -1.61
NIP7-204ENST00000562523 DGLUCYQ7Z3D6 616 aa5.01□□□□□ -1.61
NIP7-204ENST00000562523 ADGRE4PQ86SQ3 457 aa5.01□□□□□ -1.61
NIP7-204ENST00000562523 NOP9Q86U38 636 aaKnown RBP5.01□□□□□ -1.61
NIP7-204ENST00000562523 OSTM1Q86WC4 334 aa5.01□□□□□ -1.61
NIP7-204ENST00000562523 PTRH1Q86Y79 214 aaKnown RBP5.01□□□□□ -1.61
NIP7-204ENST00000562523 CELF2-AS1Q8N7Q2 184 aa5.01□□□□□ -1.61
NIP7-204ENST00000562523 SLC43A3Q8NBI5 491 aa5.01□□□□□ -1.61
NIP7-204ENST00000562523 NEK9Q8TD19 979 aa5.01□□□□□ -1.61
NIP7-204ENST00000562523 HNRNPLLQ8WVV9 542 aaKnown RBP5.01□□□□□ -1.61
NIP7-204ENST00000562523 CFHR4Q92496 578 aa5.01□□□□□ -1.61
NIP7-204ENST00000562523 NUP88Q99567 741 aaPredicted RBP5.01□□□□□ -1.61
NIP7-204ENST00000562523 RAD9AQ99638 391 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms