RNA–Protein interactions for RNA: ENST00000561707.1

COTL1-202, Transcript of coactosin like F-actin binding protein 1, humanhuman

TSL 1 (best)

Gene COTL1, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COTL1-202ENST00000561707 USP41Q3LFD5 358 aa13.6□□□□□ -0.23
COTL1-202ENST00000561707 PKDCCQ504Y2 493 aa13.6□□□□□ -0.23
COTL1-202ENST00000561707 C10orf76Q5T2E6 689 aa13.6□□□□□ -0.23
COTL1-202ENST00000561707 LLGL2Q6P1M3 1020 aa13.6□□□□□ -0.23
COTL1-202ENST00000561707 DDX53Q86TM3 631 aaKnown RBP13.6□□□□□ -0.23
COTL1-202ENST00000561707 RNF168Q8IYW5 571 aaPredicted RBP13.6□□□□□ -0.23
COTL1-202ENST00000561707 KLHL23Q8NBE8 558 aa13.6□□□□□ -0.23
COTL1-202ENST00000561707 TMEM35BQ8NCS4 154 aa13.6□□□□□ -0.23
COTL1-202ENST00000561707 MYCBPAPQ8TBZ2 947 aa13.6□□□□□ -0.23
COTL1-202ENST00000561707 RIN2Q8WYP3 895 aaPredicted RBP13.6□□□□□ -0.23
COTL1-202ENST00000561707 CLP1Q92989 425 aaKnown RBP13.6□□□□□ -0.23
COTL1-202ENST00000561707 SECISBP2LQ93073 1101 aaKnown RBP13.6□□□□□ -0.23
COTL1-202ENST00000561707 ARHGEF26Q96DR7 871 aa13.6□□□□□ -0.23
COTL1-202ENST00000561707 TMEM169Q96HH4 297 aa13.6□□□□□ -0.23
COTL1-202ENST00000561707 RHOBTB2Q9BYZ6 727 aa13.6□□□□□ -0.23
COTL1-202ENST00000561707 ZCWPW1Q9H0M4 648 aa13.6□□□□□ -0.23
COTL1-202ENST00000561707 PLXNA4Q9HCM2 1894 aa13.6□□□□□ -0.23
COTL1-202ENST00000561707 LZTFL1Q9NQ48 299 aa13.6□□□□□ -0.23
COTL1-202ENST00000561707 KCND1Q9NSA2 647 aa13.6□□□□□ -0.23
COTL1-202ENST00000561707 CHORDC1Q9UHD1 332 aaPredicted RBP13.6□□□□□ -0.23
COTL1-202ENST00000561707 SALL4Q9UJQ4 1053 aa13.6□□□□□ -0.23
COTL1-202ENST00000561707 PAXBP1Q9Y5B6 917 aa13.6□□□□□ -0.23
COTL1-202ENST00000561707 MKI67P46013 3256 aaKnown RBP13.59□□□□□ -0.23
COTL1-202ENST00000561707 PJA2O43164 708 aa13.59□□□□□ -0.23
COTL1-202ENST00000561707 BEST1O76090 585 aa13.59□□□□□ -0.23
COTL1-202ENST00000561707 FGF18O76093 207 aa13.59□□□□□ -0.23
COTL1-202ENST00000561707 RPL17P18621 184 aaKnown RBP13.59□□□□□ -0.23
COTL1-202ENST00000561707 MSNP26038 577 aaKnown RBP13.59□□□□□ -0.23
COTL1-202ENST00000561707 CDH5P33151 784 aaPredicted RBP13.59□□□□□ -0.23
COTL1-202ENST00000561707 BMPR1AP36894 532 aa13.59□□□□□ -0.23
COTL1-202ENST00000561707 PBX2P40425 430 aa13.59□□□□□ -0.23
COTL1-202ENST00000561707 GPD2P43304 727 aa13.59□□□□□ -0.23
COTL1-202ENST00000561707 RGS7P49802 495 aa13.59□□□□□ -0.23
COTL1-202ENST00000561707 PDE4CQ08493 712 aa13.59□□□□□ -0.23
COTL1-202ENST00000561707 PTP4A2Q12974 167 aa13.59□□□□□ -0.23
COTL1-202ENST00000561707 STILQ15468 1287 aa13.59□□□□□ -0.23
COTL1-202ENST00000561707 MMS22LQ6ZRQ5 1243 aa13.59□□□□□ -0.23
COTL1-202ENST00000561707 MCOLN2Q8IZK6 566 aa13.59□□□□□ -0.23
COTL1-202ENST00000561707 ANKRD52Q8NB46 1076 aa13.59□□□□□ -0.23
COTL1-202ENST00000561707 AUTS2Q8WXX7 1259 aa13.59□□□□□ -0.23
COTL1-202ENST00000561707 MYLPFQ96A32 169 aa13.59□□□□□ -0.23
COTL1-202ENST00000561707 PCED1BQ96HM7 432 aa13.59□□□□□ -0.23
COTL1-202ENST00000561707 C17orf80Q9BSJ5 609 aa13.59□□□□□ -0.23
COTL1-202ENST00000561707 HERC2P3Q9BVR0 1158 aa13.59□□□□□ -0.23
COTL1-202ENST00000561707 IRX2Q9BZI1 471 aaPredicted RBP13.59□□□□□ -0.23
COTL1-202ENST00000561707 ZNF518BQ9C0D4 1074 aa13.59□□□□□ -0.23
COTL1-202ENST00000561707 DNAI2Q9GZS0 605 aa13.59□□□□□ -0.23
COTL1-202ENST00000561707 THAP2Q9H0W7 228 aa13.59□□□□□ -0.23
COTL1-202ENST00000561707 CHST7Q9NS84 486 aa13.59□□□□□ -0.23
COTL1-202ENST00000561707 MYO1AQ9UBC5 1043 aa13.59□□□□□ -0.23
COTL1-202ENST00000561707 TJP2Q9UDY2 1190 aa13.59□□□□□ -0.23
COTL1-202ENST00000561707 PTPRDP23468 1912 aa13.58□□□□□ -0.23
COTL1-202ENST00000561707 H7C4K7 107 aa13.58□□□□□ -0.24
COTL1-202ENST00000561707 PIK3R2O00459 728 aa13.58□□□□□ -0.24
COTL1-202ENST00000561707 ATMINO43313 823 aaPredicted RBP13.58□□□□□ -0.24
COTL1-202ENST00000561707 LSM8O95777 96 aaKnown RBP13.58□□□□□ -0.24
COTL1-202ENST00000561707 SOD2P04179 222 aa13.58□□□□□ -0.24
COTL1-202ENST00000561707 BDNFP23560 247 aa13.58□□□□□ -0.24
COTL1-202ENST00000561707 CTNNB1P35222 781 aa13.58□□□□□ -0.24
COTL1-202ENST00000561707 CACNA2D1P54289 1103 aa13.58□□□□□ -0.24
COTL1-202ENST00000561707 GPC5P78333 572 aa13.58□□□□□ -0.24
COTL1-202ENST00000561707 TSPY1Q01534 308 aa13.58□□□□□ -0.24
COTL1-202ENST00000561707 CENPCQ03188 943 aa13.58□□□□□ -0.24
COTL1-202ENST00000561707 SLC39A12Q504Y0 691 aa13.58□□□□□ -0.24
COTL1-202ENST00000561707 KIAA1841Q6NSI8 718 aa13.58□□□□□ -0.24
COTL1-202ENST00000561707 PMF1Q6P1K2 205 aa13.58□□□□□ -0.24
COTL1-202ENST00000561707 ERICH1Q86X53 443 aa13.58□□□□□ -0.24
COTL1-202ENST00000561707 PHF13Q86YI8 300 aaPredicted RBP13.58□□□□□ -0.24
COTL1-202ENST00000561707 VPS52Q8N1B4 723 aa13.58□□□□□ -0.24
COTL1-202ENST00000561707 SLC35F5Q8WV83 523 aa13.58□□□□□ -0.24
COTL1-202ENST00000561707 SMOQ99835 787 aa13.58□□□□□ -0.24
COTL1-202ENST00000561707 C11orf70Q9BRQ4 267 aa13.58□□□□□ -0.24
COTL1-202ENST00000561707 DUSP16Q9BY84 665 aa13.58□□□□□ -0.24
COTL1-202ENST00000561707 TMEM30AQ9NV96 361 aa13.58□□□□□ -0.24
COTL1-202ENST00000561707 ADAM22Q9P0K1 906 aa13.58□□□□□ -0.24
COTL1-202ENST00000561707 HESX1Q9UBX0 185 aa13.58□□□□□ -0.24
COTL1-202ENST00000561707 INTUQ9ULD6 942 aa13.58□□□□□ -0.24
COTL1-202ENST00000561707 GUCA1BQ9UMX6 200 aa13.58□□□□□ -0.24
COTL1-202ENST00000561707 YBX2Q9Y2T7 364 aaKnown RBP13.58□□□□□ -0.24
COTL1-202ENST00000561707 ANKRD62A6NC57 917 aa13.57□□□□□ -0.24
COTL1-202ENST00000561707 OR6C75A6NL08 312 aa13.57□□□□□ -0.24
COTL1-202ENST00000561707 CAPN15O75808 1086 aa13.57□□□□□ -0.24
COTL1-202ENST00000561707 AP1G2O75843 785 aa13.57□□□□□ -0.24
COTL1-202ENST00000561707 GJB6O95452 261 aa13.57□□□□□ -0.24
COTL1-202ENST00000561707 TMEM253P0C7T8 217 aa13.57□□□□□ -0.24
COTL1-202ENST00000561707 MMP8P22894 467 aa13.57□□□□□ -0.24
COTL1-202ENST00000561707 CYP2F1P24903 491 aa13.57□□□□□ -0.24
COTL1-202ENST00000561707 NSFP46459 744 aaKnown RBP13.57□□□□□ -0.24
COTL1-202ENST00000561707 PLCB3Q01970 1234 aa13.57□□□□□ -0.24
COTL1-202ENST00000561707 DSG1Q02413 1049 aa13.57□□□□□ -0.24
COTL1-202ENST00000561707 KRT17Q04695 432 aa13.57□□□□□ -0.24
COTL1-202ENST00000561707 KIF5AQ12840 1032 aa13.57□□□□□ -0.24
COTL1-202ENST00000561707 PSMD5Q16401 504 aa13.57□□□□□ -0.24
COTL1-202ENST00000561707 PTPN20Q4JDL3 420 aa13.57□□□□□ -0.24
COTL1-202ENST00000561707 CYP4A22Q5TCH4 519 aa13.57□□□□□ -0.24
COTL1-202ENST00000561707 ZNF280DQ6N043 979 aa13.57□□□□□ -0.24
COTL1-202ENST00000561707 ZNF662Q6ZS27 426 aa13.57□□□□□ -0.24
COTL1-202ENST00000561707 ANKS3Q6ZW76 656 aa13.57□□□□□ -0.24
COTL1-202ENST00000561707 MON1BQ7L1V2 547 aa13.57□□□□□ -0.24
COTL1-202ENST00000561707 FAM35AQ86V20 835 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms