RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 NOL3O60936 208 aaKnown RBP2.21□□□□□ -2.06
RTF1-207ENST00000561076 STAM2O75886 525 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 RASAL1O95294 804 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 WISP1O95388 367 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 PGM3O95394 542 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 TIAF1O95411 115 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 LY86O95711 162 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 GUCA1CO95843 209 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 VIPP01282 170 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 TFRCP02786 760 aaKnown RBP2.21□□□□□ -2.06
RTF1-207ENST00000561076 NTRK1P04629 796 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 CLEC3BP05452 202 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 CD1AP06126 327 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 GRPP07492 148 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 CNPP09543 421 aaKnown RBP2.21□□□□□ -2.06
RTF1-207ENST00000561076 LTA4HP09960 611 aaKnown RBP2.21□□□□□ -2.06
RTF1-207ENST00000561076 BCRP11274 1271 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 UBL4AP11441 157 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 EPXP11678 715 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 P4HA1P13674 534 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 FDPSP14324 419 aaKnown RBP2.21□□□□□ -2.06
RTF1-207ENST00000561076 IL2RBP14784 551 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 PFKLP17858 780 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 EGR1P18146 543 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 HDCP19113 662 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 DDCP20711 480 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 PTGS1P23219 599 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 YY1P25490 414 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 ACVR2AP27037 513 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 PRDX5P30044 214 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 GRK5P34947 590 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 GGT5P36269 586 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 HADHAP40939 763 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 RGS2P41220 211 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 DPP6P42658 865 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 TXKP42681 527 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 GPD2P43304 727 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 PSMC4P43686 418 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 CPT1AP50416 773 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 MRPL12P52815 198 aaKnown RBP2.21□□□□□ -2.06
RTF1-207ENST00000561076 EPHA5P54756 1037 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 MLLT6P55198 1093 aaPredicted RBP2.21□□□□□ -2.06
RTF1-207ENST00000561076 RRP1P56182 461 aaKnown RBP2.21□□□□□ -2.06
RTF1-207ENST00000561076 CORO7P57737 925 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 BPIFB3P59826 476 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 HTRA4P83105 476 aaPredicted RBP2.21□□□□□ -2.06
RTF1-207ENST00000561076 ATP8B2P98198 1209 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 KRT17Q04695 432 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 TLE1Q04724 770 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 YWHAHQ04917 246 aaPredicted RBP2.21□□□□□ -2.06
RTF1-207ENST00000561076 ZBTB16Q05516 673 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 RNASELQ05823 741 aaKnown RBP2.21□□□□□ -2.06
RTF1-207ENST00000561076 SCN1BQ07699 218 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 TBL3Q12788 808 aaKnown RBP2.21□□□□□ -2.06
RTF1-207ENST00000561076 MYO1EQ12965 1108 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 GPS1Q13098 491 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 CTBP1Q13363 440 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 ADAM15Q13444 863 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 CSHL1Q14406 222 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 PUM1Q14671 1186 aaKnown RBP eCLIP2.21□□□□□ -2.06
RTF1-207ENST00000561076 TNIP1Q15025 636 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 NTRK2Q16620 822 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 TRIM71Q2Q1W2 868 aaKnown RBP2.21□□□□□ -2.06
RTF1-207ENST00000561076 SMU1Q2TAY7 513 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 MMEL1Q495T6 779 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 C5orf22Q49AR2 442 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 PRRT3Q5FWE3 981 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 ATXN7L2Q5T6C5 722 aaPredicted RBP2.21□□□□□ -2.06
RTF1-207ENST00000561076 DCAF12L1Q5VU92 463 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 LHX8Q68G74 356 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 RAB12Q6IQ22 244 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 ANO7Q6IWH7 933 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 RPUSD3Q6P087 351 aaKnown RBP2.21□□□□□ -2.06
RTF1-207ENST00000561076 ALKBH5Q6P6C2 394 aaKnown RBP2.21□□□□□ -2.06
RTF1-207ENST00000561076 IYDQ6PHW0 289 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 ABRAXAS1Q6UWZ7 409 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 LAYNQ6UX15 382 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 DPP8Q6V1X1 898 aaPredicted RBP2.21□□□□□ -2.06
RTF1-207ENST00000561076 C20orf204Q6ZNR8 217 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 C8orf86Q6ZUL3 223 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 BBS12Q6ZW61 710 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 USP49Q70CQ1 688 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 CHSY3Q70JA7 882 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 GAREM2Q75VX8 874 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 MCM10Q7L590 875 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 RASGRP2Q7LDG7 609 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 RRM2BQ7LG56 351 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 GSTA5Q7RTV2 222 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 KANSL1Q7Z3B3 1105 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 CCDC186Q7Z3E2 898 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 KRT28Q7Z3Y7 464 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 PXKQ7Z7A4 578 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 ARHGEF25Q86VW2 580 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 PPP1R3BQ86XI6 285 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 ANKRD13BQ86YJ7 626 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 SAMD14Q8IZD0 417 aaPredicted RBP2.21□□□□□ -2.06
RTF1-207ENST00000561076 CNTROBQ8N137 903 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 AGGF1Q8N302 714 aaeCLIP2.21□□□□□ -2.06
RTF1-207ENST00000561076 CELF5Q8N6W0 485 aaKnown RBP2.21□□□□□ -2.06
RTF1-207ENST00000561076 VGLL2Q8N8G2 317 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms