RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 ZNF449Q6P9G9 518 aa14.69□□□□□ -0.06
RABGGTA-220ENST00000560998 RHBDF2Q6PJF5 856 aa14.69□□□□□ -0.06
RABGGTA-220ENST00000560998 C15orf39Q6ZRI6 1047 aa14.69□□□□□ -0.06
RABGGTA-220ENST00000560998 ADAT2Q7Z6V5 191 aaKnown RBP14.69□□□□□ -0.06
RABGGTA-220ENST00000560998 CCDC25Q86WR0 208 aa14.69□□□□□ -0.06
RABGGTA-220ENST00000560998 CCNJLQ8IV13 435 aa14.69□□□□□ -0.06
RABGGTA-220ENST00000560998 NME8Q8N427 588 aa14.69□□□□□ -0.06
RABGGTA-220ENST00000560998 NRG4Q8WWG1 115 aa14.69□□□□□ -0.06
RABGGTA-220ENST00000560998 ALG3Q92685 438 aa14.69□□□□□ -0.06
RABGGTA-220ENST00000560998 NIFKQ9BYG3 293 aaKnown RBP14.69□□□□□ -0.06
RABGGTA-220ENST00000560998 ASCC2Q9H1I8 757 aaPredicted RBP14.69□□□□□ -0.06
RABGGTA-220ENST00000560998 PORCNQ9H237 461 aa14.69□□□□□ -0.06
RABGGTA-220ENST00000560998 KIAA1586Q9HCI6 787 aa14.69□□□□□ -0.06
RABGGTA-220ENST00000560998 ZFP69BQ9UJL9 534 aa14.69□□□□□ -0.06
RABGGTA-220ENST00000560998 ALG6Q9Y672 507 aa14.69□□□□□ -0.06
RABGGTA-220ENST00000560998 STYXL1Q9Y6J8 313 aa14.69□□□□□ -0.06
RABGGTA-220ENST00000560998 SBF1O95248 1867 aa14.68□□□□□ -0.06
RABGGTA-220ENST00000560998 CAPN9O14815 690 aa14.68□□□□□ -0.06
RABGGTA-220ENST00000560998 PRPF4O43172 522 aaKnown RBP eCLIP14.68□□□□□ -0.062e-6■□□□□ 10
RABGGTA-220ENST00000560998 ACSL3O95573 720 aa14.68□□□□□ -0.06
RABGGTA-220ENST00000560998 ASMTLO95671 621 aa14.68□□□□□ -0.06
RABGGTA-220ENST00000560998 UBA1P22314 1058 aaKnown RBP14.68□□□□□ -0.06
RABGGTA-220ENST00000560998 GLRA2P23416 452 aa14.68□□□□□ -0.06
RABGGTA-220ENST00000560998 EDNRBP24530 442 aa14.68□□□□□ -0.06
RABGGTA-220ENST00000560998 ARL2P36404 184 aa14.68□□□□□ -0.06
RABGGTA-220ENST00000560998 SESN3P58005 492 aa14.68□□□□□ -0.06
RABGGTA-220ENST00000560998 CLDN10P78369 228 aa14.68□□□□□ -0.06
RABGGTA-220ENST00000560998 ZNF211Q13398 564 aaPredicted RBP14.68□□□□□ -0.06
RABGGTA-220ENST00000560998 STAT4Q14765 748 aa14.68□□□□□ -0.06
RABGGTA-220ENST00000560998 FAM47EQ6ZV65 393 aa14.68□□□□□ -0.06
RABGGTA-220ENST00000560998 CCDC105Q8IYK2 499 aa14.68□□□□□ -0.06
RABGGTA-220ENST00000560998 PSPC1Q8WXF1 523 aaKnown RBP14.68□□□□□ -0.06
RABGGTA-220ENST00000560998 ZNF516Q92618 1163 aa14.68□□□□□ -0.06
RABGGTA-220ENST00000560998 DHX38Q92620 1227 aaKnown RBP14.68□□□□□ -0.06
RABGGTA-220ENST00000560998 ZSWIM1Q9BR11 485 aa14.68□□□□□ -0.06
RABGGTA-220ENST00000560998 NDUFA13Q9P0J0 144 aa14.68□□□□□ -0.06
RABGGTA-220ENST00000560998 SMG5Q9UPR3 1016 aaKnown RBP14.68□□□□□ -0.06
RABGGTA-220ENST00000560998 GSTTP1A0A1W2PQM5 241 aa14.67□□□□□ -0.06
RABGGTA-220ENST00000560998 SOWAHBA6NEL2 793 aa14.67□□□□□ -0.06
RABGGTA-220ENST00000560998 ZC3H11AO75152 810 aaKnown RBP eCLIP14.67□□□□□ -0.06
RABGGTA-220ENST00000560998 PIGRP01833 764 aa14.67□□□□□ -0.06
RABGGTA-220ENST00000560998 CYP1A2P05177 515 aa14.67□□□□□ -0.06
RABGGTA-220ENST00000560998 MAN1A1P33908 653 aa14.67□□□□□ -0.06
RABGGTA-220ENST00000560998 NAMPTP43490 491 aa14.67□□□□□ -0.06
RABGGTA-220ENST00000560998 PSMD6Q15008 389 aa14.67□□□□□ -0.06
RABGGTA-220ENST00000560998 PDK4Q16654 411 aa14.67□□□□□ -0.06
RABGGTA-220ENST00000560998 CEP128Q6ZU80 1094 aa14.67□□□□□ -0.06
RABGGTA-220ENST00000560998 ENOSF1Q7L5Y1 443 aa14.67□□□□□ -0.06
RABGGTA-220ENST00000560998 ST13P4Q8IZP2 240 aaPredicted RBP14.67□□□□□ -0.06
RABGGTA-220ENST00000560998 ARHGAP24Q8N264 748 aa14.67□□□□□ -0.06
RABGGTA-220ENST00000560998 DDX1Q92499 740 aaKnown RBP14.67□□□□□ -0.06
RABGGTA-220ENST00000560998 ELMO3Q96BJ8 720 aa14.67□□□□□ -0.06
RABGGTA-220ENST00000560998 BTBD10Q9BSF8 475 aa14.67□□□□□ -0.06
RABGGTA-220ENST00000560998 AAASQ9NRG9 546 aa14.67□□□□□ -0.06
RABGGTA-220ENST00000560998 SENP1Q9P0U3 644 aa14.67□□□□□ -0.06
RABGGTA-220ENST00000560998 ZNF510Q9Y2H8 683 aa14.67□□□□□ -0.06
RABGGTA-220ENST00000560998 LRRC37A2A6NM11 1700 aa14.67□□□□□ -0.06
RABGGTA-220ENST00000560998 FARP2O94887 1054 aaPredicted RBP14.67□□□□□ -0.06
RABGGTA-220ENST00000560998 FAM200BP0CF97 657 aa14.67□□□□□ -0.06
RABGGTA-220ENST00000560998 GCNT1Q02742 428 aa14.67□□□□□ -0.06
RABGGTA-220ENST00000560998 TAF1BQ53T94 588 aaPredicted RBP14.67□□□□□ -0.06
RABGGTA-220ENST00000560998 FYB2Q5VWT5 728 aa14.67□□□□□ -0.06
RABGGTA-220ENST00000560998 DEPTORQ8TB45 409 aa14.67□□□□□ -0.06
RABGGTA-220ENST00000560998 IRGQQ8WZA9 623 aa14.67□□□□□ -0.06
RABGGTA-220ENST00000560998 FAM84AQ96KN4 292 aa14.67□□□□□ -0.06
RABGGTA-220ENST00000560998 PCYT2Q99447 389 aa14.67□□□□□ -0.06
RABGGTA-220ENST00000560998 PI4K2AQ9BTU6 479 aa14.67□□□□□ -0.06
RABGGTA-220ENST00000560998 SPATC1LQ9H0A9 340 aa14.67□□□□□ -0.06
RABGGTA-220ENST00000560998 WNT8AQ9H1J5 351 aa14.67□□□□□ -0.06
RABGGTA-220ENST00000560998 LRRC19Q9H756 370 aa14.67□□□□□ -0.06
RABGGTA-220ENST00000560998 PREBQ9HCU5 417 aa14.67□□□□□ -0.06
RABGGTA-220ENST00000560998 DNAJB4Q9UDY4 337 aa14.67□□□□□ -0.06
RABGGTA-220ENST00000560998 CSADQ9Y600 493 aa14.67□□□□□ -0.06
RABGGTA-220ENST00000560998 TMEM110-MUSTN1A8MSY1 372 aa14.66□□□□□ -0.06
RABGGTA-220ENST00000560998 ADM5C9JUS6 153 aa14.66□□□□□ -0.06
RABGGTA-220ENST00000560998 ATMINO43313 823 aaPredicted RBP14.66□□□□□ -0.06
RABGGTA-220ENST00000560998 THAP12O43422 761 aa14.66□□□□□ -0.06
RABGGTA-220ENST00000560998 ATP9BO43861 1147 aa14.66□□□□□ -0.06
RABGGTA-220ENST00000560998 GRIN3BO60391 1043 aa14.66□□□□□ -0.06
RABGGTA-220ENST00000560998 CBX6O95503 412 aa14.66□□□□□ -0.06
RABGGTA-220ENST00000560998 PABPC4LP0CB38 370 aaKnown RBP14.66□□□□□ -0.06
RABGGTA-220ENST00000560998 WNT7BP56706 349 aa14.66□□□□□ -0.06
RABGGTA-220ENST00000560998 NLRP11P59045 1033 aaKnown RBP14.66□□□□□ -0.06
RABGGTA-220ENST00000560998 KCTD19Q17RG1 926 aaPredicted RBP14.66□□□□□ -0.06
RABGGTA-220ENST00000560998 ACSBG2Q5FVE4 666 aa14.66□□□□□ -0.06
RABGGTA-220ENST00000560998 GADL1Q6ZQY3 521 aa14.66□□□□□ -0.06
RABGGTA-220ENST00000560998 MARK2Q7KZI7 788 aaKnown RBP14.66□□□□□ -0.06
RABGGTA-220ENST00000560998 RELL1Q8IUW5 271 aa14.66□□□□□ -0.06
RABGGTA-220ENST00000560998 SRRM1Q8IYB3 904 aaKnown RBP14.66□□□□□ -0.06
RABGGTA-220ENST00000560998 SLC7A3Q8WY07 619 aa14.66□□□□□ -0.06
RABGGTA-220ENST00000560998 HIC2Q96JB3 615 aa14.66□□□□□ -0.06
RABGGTA-220ENST00000560998 FAM81BQ96LP2 452 aa14.66□□□□□ -0.06
RABGGTA-220ENST00000560998 MIPEPQ99797 713 aa14.66□□□□□ -0.06
RABGGTA-220ENST00000560998 CADM1Q9BY67 442 aaKnown RBP14.66□□□□□ -0.06
RABGGTA-220ENST00000560998 HAPLN2Q9GZV7 340 aa14.66□□□□□ -0.06
RABGGTA-220ENST00000560998 EPB41L1Q9H4G0 881 aa14.66□□□□□ -0.06
RABGGTA-220ENST00000560998 CYLDQ9NQC7 956 aa14.66□□□□□ -0.06
RABGGTA-220ENST00000560998 C1orf112Q9NSG2 853 aa14.66□□□□□ -0.06
RABGGTA-220ENST00000560998 EURLQ9NYK6 297 aa14.66□□□□□ -0.06
RABGGTA-220ENST00000560998 CHORDC1Q9UHD1 332 aaPredicted RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms