RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 CDC25CP30307 473 aa14.11□□□□□ -0.15
SMAD3-213ENST00000560175 VCPP55072 806 aaKnown RBP14.11□□□□□ -0.15
SMAD3-213ENST00000560175 STARD6P59095 220 aa14.11□□□□□ -0.15
SMAD3-213ENST00000560175 BIRC3Q13489 604 aa14.11□□□□□ -0.15
SMAD3-213ENST00000560175 VEPH1Q14D04 833 aa14.11□□□□□ -0.15
SMAD3-213ENST00000560175 DDR2Q16832 855 aa14.11□□□□□ -0.15
SMAD3-213ENST00000560175 ZNF699Q32M78 642 aa14.11□□□□□ -0.15
SMAD3-213ENST00000560175 IER5LQ5T953 404 aa14.11□□□□□ -0.15
SMAD3-213ENST00000560175 CWF19L1Q69YN2 538 aaKnown RBP14.11□□□□□ -0.15
SMAD3-213ENST00000560175 ASTLQ6HA08 431 aaPredicted RBP14.11□□□□□ -0.15
SMAD3-213ENST00000560175 SPATA2LQ8IUW3 424 aaPredicted RBP14.11□□□□□ -0.15
SMAD3-213ENST00000560175 MFSD6LQ8IWD5 586 aa14.11□□□□□ -0.15
SMAD3-213ENST00000560175 SUGP1Q8IWZ8 645 aaKnown RBP14.11□□□□□ -0.15
SMAD3-213ENST00000560175 CRYBG2Q8N1P7 616 aa14.11□□□□□ -0.15
SMAD3-213ENST00000560175 ST13P5Q8NFI4 369 aaPredicted RBP14.11□□□□□ -0.15
SMAD3-213ENST00000560175 ZSCAN18Q8TBC5 510 aaPredicted RBP14.11□□□□□ -0.15
SMAD3-213ENST00000560175 GIPC2Q8TF65 315 aa14.11□□□□□ -0.15
SMAD3-213ENST00000560175 PCED1BQ96HM7 432 aa14.11□□□□□ -0.15
SMAD3-213ENST00000560175 PRRX2Q99811 253 aa14.11□□□□□ -0.15
SMAD3-213ENST00000560175 KXD1Q9BQD3 176 aa14.11□□□□□ -0.15
SMAD3-213ENST00000560175 BCO2Q9BYV7 579 aa14.11□□□□□ -0.15
SMAD3-213ENST00000560175 SDCBP2Q9H190 292 aa14.11□□□□□ -0.15
SMAD3-213ENST00000560175 SNX25Q9H3E2 840 aa14.11□□□□□ -0.15
SMAD3-213ENST00000560175 TMEM8AQ9HCN3 771 aa14.11□□□□□ -0.15
SMAD3-213ENST00000560175 OBP2AQ9NY56 170 aa14.11□□□□□ -0.15
SMAD3-213ENST00000560175 NXF1Q9UBU9 619 aaKnown RBP14.11□□□□□ -0.15
SMAD3-213ENST00000560175 COQ4Q9Y3A0 265 aa14.11□□□□□ -0.15
SMAD3-213ENST00000560175 CACNA1HO95180 2353 aa14.11□□□□□ -0.15
SMAD3-213ENST00000560175 KIF26AQ9ULI4 1882 aaPredicted RBP14.1□□□□□ -0.15
SMAD3-213ENST00000560175 F5P12259 2224 aa14.1□□□□□ -0.15
SMAD3-213ENST00000560175 SLC16A3O15427 465 aaKnown RBP14.1□□□□□ -0.15
SMAD3-213ENST00000560175 KRT13P13646 458 aa14.1□□□□□ -0.15
SMAD3-213ENST00000560175 AOC1P19801 751 aa14.1□□□□□ -0.15
SMAD3-213ENST00000560175 ANP32AP39687 249 aaKnown RBP14.1□□□□□ -0.15
SMAD3-213ENST00000560175 GCLMP48507 274 aa14.1□□□□□ -0.15
SMAD3-213ENST00000560175 GPR15P49685 360 aa14.1□□□□□ -0.15
SMAD3-213ENST00000560175 CDR1P51861 262 aa14.1□□□□□ -0.15
SMAD3-213ENST00000560175 CDH8P55286 799 aa14.1□□□□□ -0.15
SMAD3-213ENST00000560175 NLRP12P59046 1061 aa14.1□□□□□ -0.15
SMAD3-213ENST00000560175 PSMC1P62191 440 aaKnown RBP14.1□□□□□ -0.15
SMAD3-213ENST00000560175 PFKPQ01813 784 aa14.1□□□□□ -0.15
SMAD3-213ENST00000560175 FCHO2Q0JRZ9 810 aa14.1□□□□□ -0.15
SMAD3-213ENST00000560175 VITQ6UXI7 678 aa14.1□□□□□ -0.15
SMAD3-213ENST00000560175 UNC93AQ86WB7 457 aa14.1□□□□□ -0.15
SMAD3-213ENST00000560175 SIX5Q8N196 739 aa14.1□□□□□ -0.15
SMAD3-213ENST00000560175 TMEM105Q8N8V8 129 aa14.1□□□□□ -0.15
SMAD3-213ENST00000560175 OR6B3Q8NGW1 331 aa14.1□□□□□ -0.15
SMAD3-213ENST00000560175 TAS1R2Q8TE23 839 aa14.1□□□□□ -0.15
SMAD3-213ENST00000560175 MYLPFQ96A32 169 aa14.1□□□□□ -0.15
SMAD3-213ENST00000560175 C8orf48Q96LL4 319 aa14.1□□□□□ -0.15
SMAD3-213ENST00000560175 ATXN3LQ9H3M9 355 aa14.1□□□□□ -0.15
SMAD3-213ENST00000560175 TASP1Q9H6P5 420 aa14.1□□□□□ -0.15
SMAD3-213ENST00000560175 SMYD3Q9H7B4 428 aa14.1□□□□□ -0.15
SMAD3-213ENST00000560175 NCANO14594 1321 aa14.1□□□□□ -0.15
SMAD3-213ENST00000560175 SHISA7A6NL88 538 aa14.09□□□□□ -0.15
SMAD3-213ENST00000560175 SLC38A8A6NNN8 435 aa14.09□□□□□ -0.15
SMAD3-213ENST00000560175 A8MXQ7 604 aa14.09□□□□□ -0.15
SMAD3-213ENST00000560175 ARNTLO00327 626 aa14.09□□□□□ -0.15
SMAD3-213ENST00000560175 PMM2O15305 246 aa14.09□□□□□ -0.15
SMAD3-213ENST00000560175 TRIM49P0CI25 452 aa14.09□□□□□ -0.15
SMAD3-213ENST00000560175 TRIM49CP0CI26 452 aa14.09□□□□□ -0.15
SMAD3-213ENST00000560175 P4HA1P13674 534 aa14.09□□□□□ -0.15
SMAD3-213ENST00000560175 PSMC3P17980 439 aa14.09□□□□□ -0.15
SMAD3-213ENST00000560175 DDX6P26196 483 aaKnown RBP eCLIP14.09□□□□□ -0.15
SMAD3-213ENST00000560175 ASPAP45381 313 aa14.09□□□□□ -0.15
SMAD3-213ENST00000560175 MLLT6P55198 1093 aaPredicted RBP14.09□□□□□ -0.15
SMAD3-213ENST00000560175 PRKCQQ04759 706 aa14.09□□□□□ -0.15
SMAD3-213ENST00000560175 INCA1Q0VD86 236 aa14.09□□□□□ -0.15
SMAD3-213ENST00000560175 SLC44A4Q53GD3 710 aa14.09□□□□□ -0.15
SMAD3-213ENST00000560175 STXBP5Q5T5C0 1151 aa14.09□□□□□ -0.15
SMAD3-213ENST00000560175 KRT39Q6A163 491 aa14.09□□□□□ -0.15
SMAD3-213ENST00000560175 TTI2Q6NXR4 508 aa14.09□□□□□ -0.15
SMAD3-213ENST00000560175 PAQR9Q6ZVX9 377 aa14.09□□□□□ -0.15
SMAD3-213ENST00000560175 FILIP1Q7Z7B0 1213 aa14.09□□□□□ -0.15
SMAD3-213ENST00000560175 ARID3BQ8IVW6 561 aaPredicted RBP14.09□□□□□ -0.15
SMAD3-213ENST00000560175 TRIML1Q8N9V2 468 aa14.09□□□□□ -0.15
SMAD3-213ENST00000560175 B3GALNT2Q8NCR0 500 aa14.09□□□□□ -0.15
SMAD3-213ENST00000560175 FAM200AQ8TCP9 573 aa14.09□□□□□ -0.15
SMAD3-213ENST00000560175 DEPDC1BQ8WUY9 529 aa14.09□□□□□ -0.15
SMAD3-213ENST00000560175 DNASE1L2Q92874 299 aa14.09□□□□□ -0.15
SMAD3-213ENST00000560175 RSPRY1Q96DX4 576 aa14.09□□□□□ -0.15
SMAD3-213ENST00000560175 EEF2KMTQ96G04 330 aa14.09□□□□□ -0.15
SMAD3-213ENST00000560175 LRRC3BQ96PB8 259 aa14.09□□□□□ -0.15
SMAD3-213ENST00000560175 TSG101Q99816 390 aa14.09□□□□□ -0.15
SMAD3-213ENST00000560175 DUSP9Q99956 384 aaKnown RBP14.09□□□□□ -0.15
SMAD3-213ENST00000560175 TTLL2Q9BWV7 592 aa14.09□□□□□ -0.15
SMAD3-213ENST00000560175 SLC46A2Q9BY10 475 aa14.09□□□□□ -0.15
SMAD3-213ENST00000560175 B3GNT5Q9BYG0 378 aa14.09□□□□□ -0.15
SMAD3-213ENST00000560175 DPEP3Q9H4B8 488 aa14.09□□□□□ -0.15
SMAD3-213ENST00000560175 FAM124BQ9H5Z6 455 aaPredicted RBP14.09□□□□□ -0.15
SMAD3-213ENST00000560175 CYP3A43Q9HB55 503 aa14.09□□□□□ -0.15
SMAD3-213ENST00000560175 APOBEC3GQ9HC16 384 aaKnown RBP14.09□□□□□ -0.15
SMAD3-213ENST00000560175 ARHGEF3Q9NR81 526 aa14.09□□□□□ -0.15
SMAD3-213ENST00000560175 TMEM30AQ9NV96 361 aa14.09□□□□□ -0.15
SMAD3-213ENST00000560175 KIAA1468Q9P260 1216 aa14.09□□□□□ -0.15
SMAD3-213ENST00000560175 UXTQ9UBK9 157 aaPredicted RBP14.09□□□□□ -0.15
SMAD3-213ENST00000560175 FBXL21Q9UKT6 434 aa14.09□□□□□ -0.15
SMAD3-213ENST00000560175 TRIM49BA6NDI0 452 aa14.08□□□□□ -0.16
SMAD3-213ENST00000560175 HEPACAM2A8MVW5 462 aa14.08□□□□□ -0.16
SMAD3-213ENST00000560175 PSMA7O14818 248 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms