RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 DNAAF5Q86Y56 855 aa11.06□□□□□ -0.64
TPM1-221ENST00000559831 SPATA2LQ8IUW3 424 aaPredicted RBP11.06□□□□□ -0.64
TPM1-221ENST00000559831 C1orf131Q8NDD1 294 aaKnown RBP11.06□□□□□ -0.64
TPM1-221ENST00000559831 SLC30A5Q8TAD4 765 aa11.06□□□□□ -0.64
TPM1-221ENST00000559831 MYCBPAPQ8TBZ2 947 aa11.06□□□□□ -0.64
TPM1-221ENST00000559831 CPA5Q8WXQ8 436 aa11.06□□□□□ -0.64
TPM1-221ENST00000559831 PIK3R5Q8WYR1 880 aa11.06□□□□□ -0.64
TPM1-221ENST00000559831 SECISBP2LQ93073 1101 aaKnown RBP11.06□□□□□ -0.64
TPM1-221ENST00000559831 PCED1BQ96HM7 432 aa11.06□□□□□ -0.64
TPM1-221ENST00000559831 TGS1Q96RS0 853 aaKnown RBP11.06□□□□□ -0.64
TPM1-221ENST00000559831 EIF3CQ99613 913 aaKnown RBP11.06□□□□□ -0.64
TPM1-221ENST00000559831 ZBP1Q9H171 429 aa11.06□□□□□ -0.64
TPM1-221ENST00000559831 CERS4Q9HA82 394 aa11.06□□□□□ -0.64
TPM1-221ENST00000559831 ALG13Q9NP73 1137 aaKnown RBP11.06□□□□□ -0.64
TPM1-221ENST00000559831 ENTPD7Q9NQZ7 604 aa11.06□□□□□ -0.64
TPM1-221ENST00000559831 CHST7Q9NS84 486 aa11.06□□□□□ -0.64
TPM1-221ENST00000559831 KRT82Q9NSB4 513 aa11.06□□□□□ -0.64
TPM1-221ENST00000559831 TMLHEQ9NVH6 421 aa11.06□□□□□ -0.64
TPM1-221ENST00000559831 TAS2R14Q9NYV8 317 aa11.06□□□□□ -0.64
TPM1-221ENST00000559831 MTRRQ9UBK8 725 aa11.06□□□□□ -0.64
TPM1-221ENST00000559831 PCDHGC3Q9UN70 934 aa11.06□□□□□ -0.64
TPM1-221ENST00000559831 CDY1Q9Y6F8 540 aa11.06□□□□□ -0.64
TPM1-221ENST00000559831 PLXNA3P51805 1871 aa11.06□□□□□ -0.64
TPM1-221ENST00000559831 ATP8B3O60423 1300 aa11.06□□□□□ -0.64
TPM1-221ENST00000559831 COL4A4P53420 1690 aaPredicted RBP11.05□□□□□ -0.64
TPM1-221ENST00000559831 PATJQ8NI35 1801 aa11.05□□□□□ -0.64
TPM1-221ENST00000559831 ZNF263O14978 683 aa11.05□□□□□ -0.64
TPM1-221ENST00000559831 CYP1A1P04798 512 aaPredicted RBP11.05□□□□□ -0.64
TPM1-221ENST00000559831 FAM200BP0CF97 657 aa11.05□□□□□ -0.64
TPM1-221ENST00000559831 MAGEA1P43355 309 aa11.05□□□□□ -0.64
TPM1-221ENST00000559831 ERVK-21P61565 698 aa11.05□□□□□ -0.64
TPM1-221ENST00000559831 NOMO3P69849 1222 aa11.05□□□□□ -0.64
TPM1-221ENST00000559831 KRT83P78385 493 aa11.05□□□□□ -0.64
TPM1-221ENST00000559831 MAPRE1Q15691 268 aaKnown RBP11.05□□□□□ -0.64
TPM1-221ENST00000559831 PLPP4Q5VZY2 271 aa11.05□□□□□ -0.64
TPM1-221ENST00000559831 FAM171BQ6P995 826 aa11.05□□□□□ -0.64
TPM1-221ENST00000559831 RSPO2Q6UXX9 243 aaPredicted RBP11.05□□□□□ -0.64
TPM1-221ENST00000559831 C4orf50Q6ZRC1 276 aa11.05□□□□□ -0.64
TPM1-221ENST00000559831 TMC7Q7Z402 723 aa11.05□□□□□ -0.64
TPM1-221ENST00000559831 FAM35AQ86V20 835 aa11.05□□□□□ -0.64
TPM1-221ENST00000559831 TTC30AQ86WT1 665 aa11.05□□□□□ -0.64
TPM1-221ENST00000559831 FUKQ8N0W3 1084 aa11.05□□□□□ -0.64
TPM1-221ENST00000559831 TMEM35BQ8NCS4 154 aa11.05□□□□□ -0.64
TPM1-221ENST00000559831 FBXO22Q8NEZ5 403 aa11.05□□□□□ -0.64
TPM1-221ENST00000559831 SAMD11Q96NU1 681 aa11.05□□□□□ -0.64
TPM1-221ENST00000559831 PGLYRP2Q96PD5 576 aa11.05□□□□□ -0.64
TPM1-221ENST00000559831 PKMYT1Q99640 499 aa11.05□□□□□ -0.64
TPM1-221ENST00000559831 HNRNPABQ99729 332 aaKnown RBP11.05□□□□□ -0.64
TPM1-221ENST00000559831 TCF25Q9BQ70 676 aa11.05□□□□□ -0.64
TPM1-221ENST00000559831 C11orf84Q9BUA3 381 aaPredicted RBP11.05□□□□□ -0.64
TPM1-221ENST00000559831 OXCT2Q9BYC2 517 aaPredicted RBP11.05□□□□□ -0.64
TPM1-221ENST00000559831 RHOBTB2Q9BYZ6 727 aa11.05□□□□□ -0.64
TPM1-221ENST00000559831 ZNF518BQ9C0D4 1074 aa11.05□□□□□ -0.64
TPM1-221ENST00000559831 LUC7LQ9NQ29 371 aaKnown RBP11.05□□□□□ -0.64
TPM1-221ENST00000559831 MRPL17Q9NRX2 175 aaKnown RBP11.05□□□□□ -0.64
TPM1-221ENST00000559831 ABI2Q9NYB9 513 aaPredicted RBP11.05□□□□□ -0.64
TPM1-221ENST00000559831 STK39Q9UEW8 545 aa11.05□□□□□ -0.64
TPM1-221ENST00000559831 NAGPAQ9UK23 515 aa11.05□□□□□ -0.64
TPM1-221ENST00000559831 REXO2Q9Y3B8 237 aaKnown RBP11.05□□□□□ -0.64
TPM1-221ENST00000559831 PCDHA13Q9Y5I0 950 aa11.05□□□□□ -0.64
TPM1-221ENST00000559831 BACE2Q9Y5Z0 518 aa11.05□□□□□ -0.64
TPM1-221ENST00000559831 ADGRG1Q9Y653 693 aa11.05□□□□□ -0.64
TPM1-221ENST00000559831 MYO16Q9Y6X6 1858 aa11.05□□□□□ -0.64
TPM1-221ENST00000559831 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.04□□□□□ -0.64
TPM1-221ENST00000559831 C5orf67F2Z3F1 127 aa11.04□□□□□ -0.64
TPM1-221ENST00000559831 ADAM12O43184 909 aa11.04□□□□□ -0.64
TPM1-221ENST00000559831 TBC1D4O60343 1298 aa11.04□□□□□ -0.64
TPM1-221ENST00000559831 LPXNO60711 386 aa11.04□□□□□ -0.64
TPM1-221ENST00000559831 RTN2O75298 545 aa11.04□□□□□ -0.64
TPM1-221ENST00000559831 AP1G2O75843 785 aa11.04□□□□□ -0.64
TPM1-221ENST00000559831 LCA5LO95447 670 aa11.04□□□□□ -0.64
TPM1-221ENST00000559831 CXCL14O95715 111 aa11.04□□□□□ -0.64
TPM1-221ENST00000559831 LSM8O95777 96 aaKnown RBP11.04□□□□□ -0.64
TPM1-221ENST00000559831 FTLP02792 175 aaPredicted RBP11.04□□□□□ -0.64
TPM1-221ENST00000559831 RB1P06400 928 aa11.04□□□□□ -0.64
TPM1-221ENST00000559831 CCDC175P0C221 793 aa11.04□□□□□ -0.64
TPM1-221ENST00000559831 CTSAP10619 480 aa11.04□□□□□ -0.64
TPM1-221ENST00000559831 UNGP13051 313 aaPredicted RBP11.04□□□□□ -0.64
TPM1-221ENST00000559831 BDNFP23560 247 aa11.04□□□□□ -0.64
TPM1-221ENST00000559831 OR1D2P34982 312 aa11.04□□□□□ -0.64
TPM1-221ENST00000559831 NSFP46459 744 aaKnown RBP11.04□□□□□ -0.64
TPM1-221ENST00000559831 RGS7P49802 495 aa11.04□□□□□ -0.64
TPM1-221ENST00000559831 BCAT1P54687 386 aa11.04□□□□□ -0.64
TPM1-221ENST00000559831 MAP3K7CLP57077 242 aa11.04□□□□□ -0.64
TPM1-221ENST00000559831 SLC8A3P57103 927 aa11.04□□□□□ -0.64
TPM1-221ENST00000559831 PDE4CQ08493 712 aa11.04□□□□□ -0.64
TPM1-221ENST00000559831 BST2Q10589 180 aaKnown RBP11.04□□□□□ -0.64
TPM1-221ENST00000559831 GPM6BQ13491 265 aa11.04□□□□□ -0.64
TPM1-221ENST00000559831 PTPN14Q15678 1187 aa11.04□□□□□ -0.64
TPM1-221ENST00000559831 NFE2Q16621 373 aaPredicted RBP11.04□□□□□ -0.64
TPM1-221ENST00000559831 ACAD10Q6JQN1 1059 aa11.04□□□□□ -0.64
TPM1-221ENST00000559831 PAQR9Q6ZVX9 377 aa11.04□□□□□ -0.64
TPM1-221ENST00000559831 ANKRD52Q8NB46 1076 aa11.04□□□□□ -0.64
TPM1-221ENST00000559831 SPPL3Q8TCT6 385 aa11.04□□□□□ -0.64
TPM1-221ENST00000559831 POF1BQ8WVV4 589 aa11.04□□□□□ -0.64
TPM1-221ENST00000559831 ARNTL2Q8WYA1 636 aa11.04□□□□□ -0.64
TPM1-221ENST00000559831 SMARCD1Q96GM5 515 aa11.04□□□□□ -0.64
TPM1-221ENST00000559831 NOX5Q96PH1 765 aa11.04□□□□□ -0.64
TPM1-221ENST00000559831 C11orf70Q9BRQ4 267 aa11.04□□□□□ -0.64
TPM1-221ENST00000559831 PACSIN1Q9BY11 444 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 217.5 ms