RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 LRRC3Q9BY71 257 aa8.75□□□□□ -1.01
SNX1-207ENST00000559401 KCNH6Q9H252 994 aa8.75□□□□□ -1.01
SNX1-207ENST00000559401 SMYD3Q9H7B4 428 aa8.75□□□□□ -1.01
SNX1-207ENST00000559401 ABCB6Q9NP58 842 aa8.75□□□□□ -1.01
SNX1-207ENST00000559401 CRTAC1Q9NQ79 661 aa8.75□□□□□ -1.01
SNX1-207ENST00000559401 CHMP5Q9NZZ3 219 aa8.75□□□□□ -1.01
SNX1-207ENST00000559401 ARIH1Q9Y4X5 557 aaPredicted RBP8.75□□□□□ -1.01
SNX1-207ENST00000559401 PCDHA5Q9Y5H7 936 aa8.75□□□□□ -1.01
SNX1-207ENST00000559401 PTPRDP23468 1912 aa8.75□□□□□ -1.01
SNX1-207ENST00000559401 DENND4CQ5VZ89 1909 aa8.75□□□□□ -1.01
SNX1-207ENST00000559401 MYH10P35580 1976 aa8.74□□□□□ -1.01
SNX1-207ENST00000559401 SLC38A8A6NNN8 435 aa8.74□□□□□ -1.01
SNX1-207ENST00000559401 HEPACAM2A8MVW5 462 aa8.74□□□□□ -1.01
SNX1-207ENST00000559401 BIN1O00499 593 aa8.74□□□□□ -1.01
SNX1-207ENST00000559401 ZNF263O14978 683 aa8.74□□□□□ -1.01
SNX1-207ENST00000559401 MAPK13O15264 365 aa8.74□□□□□ -1.01
SNX1-207ENST00000559401 TACC1O75410 805 aa8.74□□□□□ -1.01
SNX1-207ENST00000559401 VNN1O95497 513 aa8.74□□□□□ -1.01
SNX1-207ENST00000559401 STAU1O95793 577 aaKnown RBP8.74□□□□□ -1.01
SNX1-207ENST00000559401 HLA-DRAP01903 254 aa8.74□□□□□ -1.01
SNX1-207ENST00000559401 C4BPAP04003 597 aaKnown RBP8.74□□□□□ -1.01
SNX1-207ENST00000559401 EPB41P11171 864 aaKnown RBP8.74□□□□□ -1.01
SNX1-207ENST00000559401 NPR3P17342 541 aa8.74□□□□□ -1.01
SNX1-207ENST00000559401 PSMC3P17980 439 aa8.74□□□□□ -1.01
SNX1-207ENST00000559401 PTPN1P18031 435 aaKnown RBP8.74□□□□□ -1.01
SNX1-207ENST00000559401 TRIM21P19474 475 aaKnown RBP8.74□□□□□ -1.01
SNX1-207ENST00000559401 BDNFP23560 247 aa8.74□□□□□ -1.01
SNX1-207ENST00000559401 AVPR1AP37288 418 aa8.74□□□□□ -1.01
SNX1-207ENST00000559401 GRIK1P39086 918 aa8.74□□□□□ -1.01
SNX1-207ENST00000559401 PRCPP42785 496 aa8.74□□□□□ -1.01
SNX1-207ENST00000559401 GCLMP48507 274 aa8.74□□□□□ -1.01
SNX1-207ENST00000559401 PTPN5P54829 565 aa8.74□□□□□ -1.01
SNX1-207ENST00000559401 CDH8P55286 799 aa8.74□□□□□ -1.01
SNX1-207ENST00000559401 CLDN10P78369 228 aa8.74□□□□□ -1.01
SNX1-207ENST00000559401 IFRD2Q12894 506 aaPredicted RBP8.74□□□□□ -1.01
SNX1-207ENST00000559401 UBXN2BQ14CS0 331 aa8.74□□□□□ -1.01
SNX1-207ENST00000559401 NFIL3Q16649 462 aa8.74□□□□□ -1.01
SNX1-207ENST00000559401 SGSM1Q2NKQ1 1148 aa8.74□□□□□ -1.01
SNX1-207ENST00000559401 EDRF1Q3B7T1 1238 aa8.74□□□□□ -1.01
SNX1-207ENST00000559401 ZACNQ401N2 412 aa8.74□□□□□ -1.01
SNX1-207ENST00000559401 CFAP221Q4G0U5 840 aa8.74□□□□□ -1.01
SNX1-207ENST00000559401 ZCWPW2Q504Y3 356 aa8.74□□□□□ -1.01
SNX1-207ENST00000559401 SLC44A4Q53GD3 710 aa8.74□□□□□ -1.01
SNX1-207ENST00000559401 DCAF17Q5H9S7 520 aaPredicted RBP8.74□□□□□ -1.01
SNX1-207ENST00000559401 KLHL10Q6JEL2 608 aa8.74□□□□□ -1.01
SNX1-207ENST00000559401 SV2AQ7L0J3 742 aa8.74□□□□□ -1.01
SNX1-207ENST00000559401 LIMS2Q7Z4I7 341 aa8.74□□□□□ -1.01
SNX1-207ENST00000559401 ARID3BQ8IVW6 561 aaPredicted RBP8.74□□□□□ -1.01
SNX1-207ENST00000559401 B3GALNT2Q8NCR0 500 aa8.74□□□□□ -1.01
SNX1-207ENST00000559401 CCDC150Q8NCX0 1101 aa8.74□□□□□ -1.01
SNX1-207ENST00000559401 CSGALNACT1Q8TDX6 532 aa8.74□□□□□ -1.01
SNX1-207ENST00000559401 IRF7Q92985 503 aa8.74□□□□□ -1.01
SNX1-207ENST00000559401 E2F7Q96AV8 911 aa8.74□□□□□ -1.01
SNX1-207ENST00000559401 PCED1BQ96HM7 432 aa8.74□□□□□ -1.01
SNX1-207ENST00000559401 PKMYT1Q99640 499 aa8.74□□□□□ -1.01
SNX1-207ENST00000559401 GTPBP4Q9BZE4 634 aaKnown RBP8.74□□□□□ -1.01
SNX1-207ENST00000559401 FOXQ1Q9C009 403 aa8.74□□□□□ -1.01
SNX1-207ENST00000559401 SMG9Q9H0W8 520 aaKnown RBP8.74□□□□□ -1.01
SNX1-207ENST00000559401 XYLT2Q9H1B5 865 aa8.74□□□□□ -1.01
SNX1-207ENST00000559401 DPEP3Q9H4B8 488 aa8.74□□□□□ -1.01
SNX1-207ENST00000559401 TASP1Q9H6P5 420 aa8.74□□□□□ -1.01
SNX1-207ENST00000559401 IL21Q9HBE4 155 aa8.74□□□□□ -1.01
SNX1-207ENST00000559401 TRPC7Q9HCX4 862 aa8.74□□□□□ -1.01
SNX1-207ENST00000559401 HEBP1Q9NRV9 189 aa8.74□□□□□ -1.01
SNX1-207ENST00000559401 UXTQ9UBK9 157 aaPredicted RBP8.74□□□□□ -1.01
SNX1-207ENST00000559401 MUC6Q6W4X9 2439 aa8.74□□□□□ -1.01
SNX1-207ENST00000559401 ATP8B3O60423 1300 aa8.74□□□□□ -1.01
SNX1-207ENST00000559401 TRIM49BA6NDI0 452 aa8.73□□□□□ -1.01
SNX1-207ENST00000559401 H0Y858 1186 aa8.73□□□□□ -1.01
SNX1-207ENST00000559401 PSMA7O14818 248 aa8.73□□□□□ -1.01
SNX1-207ENST00000559401 IKBKBO14920 756 aa8.73□□□□□ -1.01
SNX1-207ENST00000559401 TRIM66O15016 1216 aa8.73□□□□□ -1.01
SNX1-207ENST00000559401 GALR2O43603 387 aaPredicted RBP8.73□□□□□ -1.01
SNX1-207ENST00000559401 PI15O43692 258 aa8.73□□□□□ -1.01
SNX1-207ENST00000559401 STX10O60499 249 aa8.73□□□□□ -1.01
SNX1-207ENST00000559401 NOL4O94818 638 aa8.73□□□□□ -1.01
SNX1-207ENST00000559401 PRAMEF12O95522 483 aa8.73□□□□□ -1.01
SNX1-207ENST00000559401 DCNP07585 359 aaKnown RBP8.73□□□□□ -1.01
SNX1-207ENST00000559401 HMGA1P17096 107 aaKnown RBP8.73□□□□□ -1.01
SNX1-207ENST00000559401 CD72P21854 359 aa8.73□□□□□ -1.01
SNX1-207ENST00000559401 MAGEA11P43364 429 aa8.73□□□□□ -1.01
SNX1-207ENST00000559401 MXI1P50539 228 aa8.73□□□□□ -1.01
SNX1-207ENST00000559401 NLRP12P59046 1061 aa8.73□□□□□ -1.01
SNX1-207ENST00000559401 NOP14P78316 857 aaKnown RBP8.73□□□□□ -1.01
SNX1-207ENST00000559401 NHLH1Q02575 133 aa8.73□□□□□ -1.01
SNX1-207ENST00000559401 PRKCQQ04759 706 aa8.73□□□□□ -1.01
SNX1-207ENST00000559401 PPP3CAQ08209 521 aa8.73□□□□□ -1.01
SNX1-207ENST00000559401 ORC1Q13415 861 aa8.73□□□□□ -1.01
SNX1-207ENST00000559401 TXNDC8Q6A555 127 aa8.73□□□□□ -1.01
SNX1-207ENST00000559401 ANKRD40Q6AI12 368 aa8.73□□□□□ -1.01
SNX1-207ENST00000559401 SPOPLQ6IQ16 392 aa8.73□□□□□ -1.01
SNX1-207ENST00000559401 PHLDB3Q6NSJ2 640 aa8.73□□□□□ -1.01
SNX1-207ENST00000559401 FAM171BQ6P995 826 aa8.73□□□□□ -1.01
SNX1-207ENST00000559401 VSTM1Q6UX27 236 aa8.73□□□□□ -1.01
SNX1-207ENST00000559401 MFSD6LQ8IWD5 586 aa8.73□□□□□ -1.01
SNX1-207ENST00000559401 MAB21L3Q8N8X9 362 aa8.73□□□□□ -1.01
SNX1-207ENST00000559401 PJA1Q8NG27 643 aa8.73□□□□□ -1.01
SNX1-207ENST00000559401 MYCBPAPQ8TBZ2 947 aa8.73□□□□□ -1.01
SNX1-207ENST00000559401 TAS1R2Q8TE23 839 aa8.73□□□□□ -1.01
SNX1-207ENST00000559401 TMEM174Q8WUU8 243 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms