RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 RPS6KA4O75676 772 aa13.04□□□□□ -0.32
CASC4-208ENST00000559151 ELANEP08246 267 aa13.04□□□□□ -0.32
CASC4-208ENST00000559151 SERPINF1P36955 418 aa13.04□□□□□ -0.32
CASC4-208ENST00000559151 TXKP42681 527 aa13.04□□□□□ -0.32
CASC4-208ENST00000559151 PXNP49023 591 aaPredicted RBP13.04□□□□□ -0.32
CASC4-208ENST00000559151 FOXR2Q6PJQ5 311 aa13.04□□□□□ -0.32
CASC4-208ENST00000559151 TMEM108Q6UXF1 575 aa13.04□□□□□ -0.32
CASC4-208ENST00000559151 LRRC55Q6ZSA7 311 aa13.04□□□□□ -0.32
CASC4-208ENST00000559151 MAPKAPK5Q8IW41 473 aa13.04□□□□□ -0.32
CASC4-208ENST00000559151 BPIFB1Q8TDL5 484 aa13.04□□□□□ -0.32
CASC4-208ENST00000559151 SMCR8Q8TEV9 937 aaPredicted RBP13.04□□□□□ -0.32
CASC4-208ENST00000559151 DCLRE1CQ96SD1 692 aaKnown RBP13.04□□□□□ -0.32
CASC4-208ENST00000559151 PCDHAC1Q9H158 963 aa13.04□□□□□ -0.32
CASC4-208ENST00000559151 TRPM5Q9NZQ8 1165 aa13.04□□□□□ -0.32
CASC4-208ENST00000559151 SORCS3Q9UPU3 1222 aa13.04□□□□□ -0.32
CASC4-208ENST00000559151 XDHP47989 1333 aa13.04□□□□□ -0.32
CASC4-208ENST00000559151 hCG_1984214I3L0E3 225 aa13.03□□□□□ -0.32
CASC4-208ENST00000559151 ZNF623O75123 536 aa13.03□□□□□ -0.32
CASC4-208ENST00000559151 TNFRSF6BO95407 300 aa13.03□□□□□ -0.32
CASC4-208ENST00000559151 IDEP14735 1019 aa13.03□□□□□ -0.32
CASC4-208ENST00000559151 CRHR2Q13324 411 aa13.03□□□□□ -0.32
CASC4-208ENST00000559151 PTK2BQ14289 1009 aa13.03□□□□□ -0.32
CASC4-208ENST00000559151 RAP1GAP2Q684P5 730 aa13.03□□□□□ -0.32
CASC4-208ENST00000559151 TMPRSS9Q7Z410 1059 aa13.03□□□□□ -0.32
CASC4-208ENST00000559151 GDF7Q7Z4P5 450 aa13.03□□□□□ -0.32
CASC4-208ENST00000559151 FAM71BQ8TC56 605 aa13.03□□□□□ -0.32
CASC4-208ENST00000559151 TRAPPC12Q8WVT3 735 aa13.03□□□□□ -0.32
CASC4-208ENST00000559151 TRIM63Q969Q1 353 aa13.03□□□□□ -0.32
CASC4-208ENST00000559151 TBC1D20Q96BZ9 403 aa13.03□□□□□ -0.32
CASC4-208ENST00000559151 SORBS1Q9BX66 1292 aaKnown RBP13.03□□□□□ -0.32
CASC4-208ENST00000559151 TMEM120AQ9BXJ8 343 aa13.03□□□□□ -0.32
CASC4-208ENST00000559151 ZMYND8Q9ULU4 1186 aaPredicted RBP13.03□□□□□ -0.32
CASC4-208ENST00000559151 MRPS17Q9Y2R5 130 aaKnown RBP13.03□□□□□ -0.32
CASC4-208ENST00000559151 LRPAP1P30533 357 aa13.02□□□□□ -0.33
CASC4-208ENST00000559151 ATICP31939 592 aa13.02□□□□□ -0.33
CASC4-208ENST00000559151 SATB1Q01826 763 aa13.02□□□□□ -0.33
CASC4-208ENST00000559151 CNGB1Q14028 1251 aaPredicted RBP13.02□□□□□ -0.33
CASC4-208ENST00000559151 ZNF750Q32MQ0 723 aa13.02□□□□□ -0.33
CASC4-208ENST00000559151 NELL2Q99435 816 aa13.02□□□□□ -0.33
CASC4-208ENST00000559151 SLC46A2Q9BY10 475 aa13.02□□□□□ -0.33
CASC4-208ENST00000559151 SAGE1Q9NXZ1 904 aa13.02□□□□□ -0.33
CASC4-208ENST00000559151 MTO1Q9Y2Z2 717 aaKnown RBP13.02□□□□□ -0.33
CASC4-208ENST00000559151 GRXCR1A8MXD5 290 aa13.01□□□□□ -0.33
CASC4-208ENST00000559151 PIAS2O75928 621 aa13.01□□□□□ -0.33
CASC4-208ENST00000559151 ZFPL1O95159 310 aa13.01□□□□□ -0.33
CASC4-208ENST00000559151 RASAL1O95294 804 aa13.01□□□□□ -0.33
CASC4-208ENST00000559151 EGR1P18146 543 aa13.01□□□□□ -0.33
CASC4-208ENST00000559151 ITGALP20701 1170 aa13.01□□□□□ -0.33
CASC4-208ENST00000559151 CCT5P48643 541 aa13.01□□□□□ -0.33
CASC4-208ENST00000559151 ANXA11P50995 505 aaKnown RBP13.01□□□□□ -0.33
CASC4-208ENST00000559151 MYO1EQ12965 1108 aa13.01□□□□□ -0.33
CASC4-208ENST00000559151 ICAM4Q14773 271 aa13.01□□□□□ -0.33
CASC4-208ENST00000559151 TMTC4Q5T4D3 741 aa13.01□□□□□ -0.33
CASC4-208ENST00000559151 USP17L6PQ6QN14 398 aa13.01□□□□□ -0.33
CASC4-208ENST00000559151 CCDC28AQ8IWP9 274 aa13.01□□□□□ -0.33
CASC4-208ENST00000559151 PARD6AQ9NPB6 346 aa13.01□□□□□ -0.33
CASC4-208ENST00000559151 RNF181Q9P0P0 153 aa13.01□□□□□ -0.33
CASC4-208ENST00000559151 AHRRA9YTQ3 701 aa13□□□□□ -0.33
CASC4-208ENST00000559151 E7ENX8 843 aa13□□□□□ -0.33
CASC4-208ENST00000559151 SCAF4O95104 1147 aaKnown RBP13□□□□□ -0.33
CASC4-208ENST00000559151 DGKEP52429 567 aa13□□□□□ -0.33
CASC4-208ENST00000559151 TAP2Q03519 686 aa13□□□□□ -0.33
CASC4-208ENST00000559151 RRP1BQ14684 758 aaKnown RBP13□□□□□ -0.33
CASC4-208ENST00000559151 POSTNQ15063 836 aa13□□□□□ -0.33
CASC4-208ENST00000559151 CLNKQ7Z7G1 428 aa13□□□□□ -0.33
CASC4-208ENST00000559151 SIAH1Q8IUQ4 282 aa13□□□□□ -0.33
CASC4-208ENST00000559151 TEPSINQ96N21 525 aa13□□□□□ -0.33
CASC4-208ENST00000559151 WWC2-AS2Q96NR7 200 aa13□□□□□ -0.33
CASC4-208ENST00000559151 RBM15Q96T37 977 aaKnown RBP eCLIP13□□□□□ -0.33
CASC4-208ENST00000559151 PAGR1Q9BTK6 254 aa13□□□□□ -0.33
CASC4-208ENST00000559151 CXorf36Q9H7Y0 433 aa13□□□□□ -0.33
CASC4-208ENST00000559151 NOL12Q9UGY1 213 aaKnown RBP eCLIP13□□□□□ -0.33
CASC4-208ENST00000559151 SCAF8Q9UPN6 1271 aaKnown RBP13□□□□□ -0.33
CASC4-208ENST00000559151 NEU2Q9Y3R4 380 aa13□□□□□ -0.33
CASC4-208ENST00000559151 AQP7P3A6NL99 342 aa12.99□□□□□ -0.33
CASC4-208ENST00000559151 TRIM24O15164 1050 aa12.99□□□□□ -0.33
CASC4-208ENST00000559151 SOAT2O75908 522 aa12.99□□□□□ -0.33
CASC4-208ENST00000559151 PECAM1P16284 738 aaPredicted RBP12.99□□□□□ -0.33
CASC4-208ENST00000559151 KCNA3P22001 575 aa12.99□□□□□ -0.33
CASC4-208ENST00000559151 PRKG1Q13976 671 aa12.99□□□□□ -0.33
CASC4-208ENST00000559151 MAPKAPK3Q16644 382 aa12.99□□□□□ -0.33
CASC4-208ENST00000559151 CD300EQ496F6 205 aaPredicted RBP12.99□□□□□ -0.33
CASC4-208ENST00000559151 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.99□□□□□ -0.33
CASC4-208ENST00000559151 B3GNTL1Q67FW5 361 aaPredicted RBP12.99□□□□□ -0.33
CASC4-208ENST00000559151 KCNE5Q9UJ90 142 aa12.99□□□□□ -0.33
CASC4-208ENST00000559151 JAG2Q9Y219 1238 aa12.99□□□□□ -0.33
CASC4-208ENST00000559151 ASNA1O43681 348 aa12.98□□□□□ -0.33
CASC4-208ENST00000559151 SRGAP2O75044 1071 aa12.98□□□□□ -0.33
CASC4-208ENST00000559151 NDUFV1P49821 464 aa12.98□□□□□ -0.33
CASC4-208ENST00000559151 FOXO1Q12778 655 aa12.98□□□□□ -0.33
CASC4-208ENST00000559151 PTCHD3Q3KNS1 767 aa12.98□□□□□ -0.33
CASC4-208ENST00000559151 PREPLQ4J6C6 727 aaPredicted RBP12.98□□□□□ -0.33
CASC4-208ENST00000559151 ARL6IP4Q66PJ3 421 aaKnown RBP12.98□□□□□ -0.33
CASC4-208ENST00000559151 LIN54Q6MZP7 749 aa12.98□□□□□ -0.33
CASC4-208ENST00000559151 JMJD6Q6NYC1 403 aaPredicted RBP12.98□□□□□ -0.33
CASC4-208ENST00000559151 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.98□□□□□ -0.33
CASC4-208ENST00000559151 CPT1CQ8TCG5 803 aa12.98□□□□□ -0.33
CASC4-208ENST00000559151 PPP2R3CQ969Q6 453 aa12.98□□□□□ -0.33
CASC4-208ENST00000559151 PTDSS2Q9BVG9 487 aa12.98□□□□□ -0.33
CASC4-208ENST00000559151 FAM83DQ9H4H8 585 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms