RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 ELOVL4Q9GZR5 314 aa13.51□□□□□ -0.25
RABGGTA-207ENST00000558936 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.51□□□□□ -0.25
RABGGTA-207ENST00000558936 CDH9Q9ULB4 789 aa13.51□□□□□ -0.25
RABGGTA-207ENST00000558936 MRPS23Q9Y3D9 190 aaKnown RBP13.51□□□□□ -0.25
RABGGTA-207ENST00000558936 PCDHB5Q9Y5E4 795 aa13.51□□□□□ -0.25
RABGGTA-207ENST00000558936 ZDBF2Q9HCK1 2354 aa13.5□□□□□ -0.25
RABGGTA-207ENST00000558936 SLC16A3O15427 465 aaKnown RBP13.5□□□□□ -0.25
RABGGTA-207ENST00000558936 MICAL2O94851 1124 aa13.5□□□□□ -0.25
RABGGTA-207ENST00000558936 KIF20AO95235 890 aa13.5□□□□□ -0.25
RABGGTA-207ENST00000558936 CALCAP01258 141 aa13.5□□□□□ -0.25
RABGGTA-207ENST00000558936 FAM163BP0C2L3 166 aa13.5□□□□□ -0.25
RABGGTA-207ENST00000558936 MYL4P12829 197 aa13.5□□□□□ -0.25
RABGGTA-207ENST00000558936 RPL13P26373 211 aaKnown RBP13.5□□□□□ -0.25
RABGGTA-207ENST00000558936 VIPR2P41587 438 aa13.5□□□□□ -0.25
RABGGTA-207ENST00000558936 NDST1P52848 882 aa13.5□□□□□ -0.25
RABGGTA-207ENST00000558936 MARSP56192 900 aaKnown RBP13.5□□□□□ -0.25
RABGGTA-207ENST00000558936 NOP14P78316 857 aaKnown RBP13.5□□□□□ -0.25
RABGGTA-207ENST00000558936 GPC5P78333 572 aa13.5□□□□□ -0.25
RABGGTA-207ENST00000558936 CYP4F8P98187 520 aa13.5□□□□□ -0.25
RABGGTA-207ENST00000558936 APBA1Q02410 837 aa13.5□□□□□ -0.25
RABGGTA-207ENST00000558936 SIGLEC14Q08ET2 396 aa13.5□□□□□ -0.25
RABGGTA-207ENST00000558936 INCA1Q0VD86 236 aa13.5□□□□□ -0.25
RABGGTA-207ENST00000558936 TRPC3Q13507 836 aa13.5□□□□□ -0.25
RABGGTA-207ENST00000558936 SGSM1Q2NKQ1 1148 aa13.5□□□□□ -0.25
RABGGTA-207ENST00000558936 MDH1BQ5I0G3 518 aa13.5□□□□□ -0.25
RABGGTA-207ENST00000558936 WDR44Q5JSH3 913 aa13.5□□□□□ -0.25
RABGGTA-207ENST00000558936 TRIM59Q8IWR1 403 aa13.5□□□□□ -0.25
RABGGTA-207ENST00000558936 OR6B3Q8NGW1 331 aa13.5□□□□□ -0.25
RABGGTA-207ENST00000558936 SYAP1Q96A49 352 aaPredicted RBP13.5□□□□□ -0.25
RABGGTA-207ENST00000558936 ASB16Q96NS5 453 aa13.5□□□□□ -0.25
RABGGTA-207ENST00000558936 KCNK16Q96T55 309 aa13.5□□□□□ -0.25
RABGGTA-207ENST00000558936 ZSWIM1Q9BR11 485 aa13.5□□□□□ -0.25
RABGGTA-207ENST00000558936 SLC46A2Q9BY10 475 aa13.5□□□□□ -0.25
RABGGTA-207ENST00000558936 DUSP12Q9UNI6 340 aa13.5□□□□□ -0.25
RABGGTA-207ENST00000558936 HELZP42694 1942 aaKnown RBP13.49□□□□□ -0.25
RABGGTA-207ENST00000558936 TMEM221A6NGB7 291 aa13.49□□□□□ -0.25
RABGGTA-207ENST00000558936 HHLA1C9JL84 531 aa13.49□□□□□ -0.25
RABGGTA-207ENST00000558936 M0R296 226 aa13.49□□□□□ -0.25
RABGGTA-207ENST00000558936 ARNTLO00327 626 aa13.49□□□□□ -0.25
RABGGTA-207ENST00000558936 TNFRSF10BO14763 440 aa13.49□□□□□ -0.25
RABGGTA-207ENST00000558936 PHACTR2O75167 634 aa13.49□□□□□ -0.25
RABGGTA-207ENST00000558936 NOL4O94818 638 aa13.49□□□□□ -0.25
RABGGTA-207ENST00000558936 PRAMEF12O95522 483 aa13.49□□□□□ -0.25
RABGGTA-207ENST00000558936 CCDC130P13994 396 aa13.49□□□□□ -0.25
RABGGTA-207ENST00000558936 GTF2H1P32780 548 aa13.49□□□□□ -0.25
RABGGTA-207ENST00000558936 VCPP55072 806 aaKnown RBP13.49□□□□□ -0.25
RABGGTA-207ENST00000558936 NLRP12P59046 1061 aa13.49□□□□□ -0.25
RABGGTA-207ENST00000558936 MYL7Q01449 175 aa13.49□□□□□ -0.25
RABGGTA-207ENST00000558936 PAK1Q13153 545 aa13.49□□□□□ -0.25
RABGGTA-207ENST00000558936 PLD1Q13393 1074 aa13.49□□□□□ -0.25
RABGGTA-207ENST00000558936 TDGQ13569 410 aa13.49□□□□□ -0.25
RABGGTA-207ENST00000558936 ZNF667Q5HYK9 610 aa13.49□□□□□ -0.25
RABGGTA-207ENST00000558936 CWF19L1Q69YN2 538 aaKnown RBP13.49□□□□□ -0.25
RABGGTA-207ENST00000558936 KRT39Q6A163 491 aa13.49□□□□□ -0.25
RABGGTA-207ENST00000558936 VITQ6UXI7 678 aa13.49□□□□□ -0.25
RABGGTA-207ENST00000558936 FRMD5Q7Z6J6 570 aa13.49□□□□□ -0.25
RABGGTA-207ENST00000558936 ACOT1Q86TX2 421 aa13.49□□□□□ -0.25
RABGGTA-207ENST00000558936 UBALD2Q8IYN6 164 aa13.49□□□□□ -0.25
RABGGTA-207ENST00000558936 DCP1BQ8IZD4 617 aaKnown RBP13.49□□□□□ -0.25
RABGGTA-207ENST00000558936 CRYBG2Q8N1P7 616 aa13.49□□□□□ -0.25
RABGGTA-207ENST00000558936 TRIML1Q8N9V2 468 aa13.49□□□□□ -0.25
RABGGTA-207ENST00000558936 B3GALNT2Q8NCR0 500 aa13.49□□□□□ -0.25
RABGGTA-207ENST00000558936 C2orf15Q8WU43 125 aaKnown RBP13.49□□□□□ -0.25
RABGGTA-207ENST00000558936 CHFRQ96EP1 664 aa13.49□□□□□ -0.25
RABGGTA-207ENST00000558936 MYRFLQ96LU7 910 aa13.49□□□□□ -0.25
RABGGTA-207ENST00000558936 ZNF512Q96ME7 567 aaPredicted RBP13.49□□□□□ -0.25
RABGGTA-207ENST00000558936 SMOQ99835 787 aa13.49□□□□□ -0.25
RABGGTA-207ENST00000558936 SRRTQ9BXP5 876 aaKnown RBP13.49□□□□□ -0.25
RABGGTA-207ENST00000558936 SMG9Q9H0W8 520 aaKnown RBP13.49□□□□□ -0.25
RABGGTA-207ENST00000558936 ABCB6Q9NP58 842 aa13.49□□□□□ -0.25
RABGGTA-207ENST00000558936 RAB20Q9NX57 234 aa13.49□□□□□ -0.25
RABGGTA-207ENST00000558936 IGSF9Q9P2J2 1179 aa13.49□□□□□ -0.25
RABGGTA-207ENST00000558936 SLC38A8A6NNN8 435 aa13.48□□□□□ -0.25
RABGGTA-207ENST00000558936 A8MXQ7 604 aa13.48□□□□□ -0.25
RABGGTA-207ENST00000558936 RNF225M0QZC1 329 aaPredicted RBP13.48□□□□□ -0.25
RABGGTA-207ENST00000558936 PSMA7O14818 248 aa13.48□□□□□ -0.25
RABGGTA-207ENST00000558936 PI15O43692 258 aa13.48□□□□□ -0.25
RABGGTA-207ENST00000558936 CILPO75339 1184 aa13.48□□□□□ -0.25
RABGGTA-207ENST00000558936 COL9A1P20849 921 aa13.48□□□□□ -0.25
RABGGTA-207ENST00000558936 ACO1P21399 889 aaKnown RBP13.48□□□□□ -0.25
RABGGTA-207ENST00000558936 GABRR2P28476 465 aa13.48□□□□□ -0.25
RABGGTA-207ENST00000558936 PIK3CAP42336 1068 aa13.48□□□□□ -0.25
RABGGTA-207ENST00000558936 MAGEA11P43364 429 aa13.48□□□□□ -0.25
RABGGTA-207ENST00000558936 FMO5P49326 533 aa13.48□□□□□ -0.25
RABGGTA-207ENST00000558936 TUFMP49411 452 aaKnown RBP13.48□□□□□ -0.25
RABGGTA-207ENST00000558936 MXI1P50539 228 aa13.48□□□□□ -0.25
RABGGTA-207ENST00000558936 TNNC1P63316 161 aa13.48□□□□□ -0.25
RABGGTA-207ENST00000558936 TSPY1Q01534 308 aa13.48□□□□□ -0.25
RABGGTA-207ENST00000558936 NFE2Q16621 373 aaPredicted RBP13.48□□□□□ -0.25
RABGGTA-207ENST00000558936 PDZD4Q76G19 769 aaPredicted RBP13.48□□□□□ -0.25
RABGGTA-207ENST00000558936 BMP8AQ7Z5Y6 402 aa13.48□□□□□ -0.25
RABGGTA-207ENST00000558936 CEP63Q96MT8 703 aa13.48□□□□□ -0.25
RABGGTA-207ENST00000558936 TMEM63CQ9P1W3 806 aa13.48□□□□□ -0.25
RABGGTA-207ENST00000558936 AJAP1Q9UKB5 411 aaPredicted RBP13.48□□□□□ -0.25
RABGGTA-207ENST00000558936 CCL26Q9Y258 94 aa13.48□□□□□ -0.25
RABGGTA-207ENST00000558936 ZFP37Q9Y6Q3 630 aaPredicted RBP13.48□□□□□ -0.25
RABGGTA-207ENST00000558936 F8VP50 259 aa13.47□□□□□ -0.25
RABGGTA-207ENST00000558936 PMM2O15305 246 aa13.47□□□□□ -0.25
RABGGTA-207ENST00000558936 GABBR2O75899 941 aa13.47□□□□□ -0.25
RABGGTA-207ENST00000558936 CFHP08603 1231 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms