RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 MYL4P12829 197 aa13.16□□□□□ -0.3
SMAD3-205ENST00000558428 TRIM21P19474 475 aaKnown RBP13.16□□□□□ -0.3
SMAD3-205ENST00000558428 BDNFP23560 247 aa13.16□□□□□ -0.3
SMAD3-205ENST00000558428 MAGEA11P43364 429 aa13.16□□□□□ -0.3
SMAD3-205ENST00000558428 RPL10AP62906 217 aaKnown RBP13.16□□□□□ -0.3
SMAD3-205ENST00000558428 TYRO3Q06418 890 aa13.16□□□□□ -0.3
SMAD3-205ENST00000558428 INCA1Q0VD86 236 aa13.16□□□□□ -0.3
SMAD3-205ENST00000558428 TAF12Q16514 161 aa13.16□□□□□ -0.3
SMAD3-205ENST00000558428 DDR2Q16832 855 aa13.16□□□□□ -0.3
SMAD3-205ENST00000558428 SLC5A9Q2M3M2 681 aa13.16□□□□□ -0.3
SMAD3-205ENST00000558428 DNAJB7Q7Z6W7 309 aaPredicted RBP13.16□□□□□ -0.3
SMAD3-205ENST00000558428 ACOT1Q86TX2 421 aa13.16□□□□□ -0.3
SMAD3-205ENST00000558428 RNF135Q8IUD6 432 aa13.16□□□□□ -0.3
SMAD3-205ENST00000558428 ZDHHC14Q8IZN3 488 aa13.16□□□□□ -0.3
SMAD3-205ENST00000558428 LEMD2Q8NC56 503 aa13.16□□□□□ -0.3
SMAD3-205ENST00000558428 ENOX1Q8TC92 643 aaKnown RBP13.16□□□□□ -0.3
SMAD3-205ENST00000558428 GPR152Q8TDT2 470 aa13.16□□□□□ -0.3
SMAD3-205ENST00000558428 ING5Q8WYH8 240 aa13.16□□□□□ -0.3
SMAD3-205ENST00000558428 PSMG2Q969U7 264 aa13.16□□□□□ -0.3
SMAD3-205ENST00000558428 NT5C1BQ96P26 610 aa13.16□□□□□ -0.3
SMAD3-205ENST00000558428 ARID3AQ99856 593 aa13.16□□□□□ -0.3
SMAD3-205ENST00000558428 AVENQ9NQS1 362 aaPredicted RBP13.16□□□□□ -0.3
SMAD3-205ENST00000558428 SAMSN1Q9NSI8 373 aaKnown RBP13.16□□□□□ -0.3
SMAD3-205ENST00000558428 CLDN5O00501 218 aa13.15□□□□□ -0.3
SMAD3-205ENST00000558428 CILPO75339 1184 aa13.15□□□□□ -0.3
SMAD3-205ENST00000558428 PRKCSHP14314 528 aaPredicted RBP13.15□□□□□ -0.3
SMAD3-205ENST00000558428 TBXAS1P24557 533 aaPredicted RBP13.15□□□□□ -0.3
SMAD3-205ENST00000558428 GRIK1P39086 918 aa13.15□□□□□ -0.3
SMAD3-205ENST00000558428 CCR2P41597 374 aa13.15□□□□□ -0.3
SMAD3-205ENST00000558428 CUL2Q13617 745 aa13.15□□□□□ -0.3
SMAD3-205ENST00000558428 MAN2A1Q16706 1144 aa13.15□□□□□ -0.3
SMAD3-205ENST00000558428 ZNF394Q53GI3 561 aa13.15□□□□□ -0.3
SMAD3-205ENST00000558428 PRSS36Q5K4E3 855 aa13.15□□□□□ -0.3
SMAD3-205ENST00000558428 SDHAF4Q5VUM1 108 aa13.15□□□□□ -0.3
SMAD3-205ENST00000558428 VSTM1Q6UX27 236 aa13.15□□□□□ -0.3
SMAD3-205ENST00000558428 CRYBG2Q8N1P7 616 aa13.15□□□□□ -0.3
SMAD3-205ENST00000558428 TTC39CQ8N584 583 aa13.15□□□□□ -0.3
SMAD3-205ENST00000558428 EHBP1Q8NDI1 1231 aa13.15□□□□□ -0.3
SMAD3-205ENST00000558428 STKLD1Q8NE28 680 aa13.15□□□□□ -0.3
SMAD3-205ENST00000558428 LMO3Q8TAP4 145 aa13.15□□□□□ -0.3
SMAD3-205ENST00000558428 FGF13Q92913 245 aa13.15□□□□□ -0.3
SMAD3-205ENST00000558428 TCEAL4Q96EI5 215 aa13.15□□□□□ -0.3
SMAD3-205ENST00000558428 TWNKQ96RR1 684 aa13.15□□□□□ -0.3
SMAD3-205ENST00000558428 MED10Q9BTT4 135 aa13.15□□□□□ -0.3
SMAD3-205ENST00000558428 NT5C1AQ9BXI3 368 aa13.15□□□□□ -0.3
SMAD3-205ENST00000558428 B3GNT5Q9BYG0 378 aa13.15□□□□□ -0.3
SMAD3-205ENST00000558428 ZNF518BQ9C0D4 1074 aa13.15□□□□□ -0.3
SMAD3-205ENST00000558428 DNAI2Q9GZS0 605 aa13.15□□□□□ -0.3
SMAD3-205ENST00000558428 ZNF334Q9HCZ1 680 aaPredicted RBP13.15□□□□□ -0.3
SMAD3-205ENST00000558428 CISHQ9NSE2 258 aa13.15□□□□□ -0.3
SMAD3-205ENST00000558428 LIMD1Q9UGP4 676 aa13.15□□□□□ -0.3
SMAD3-205ENST00000558428 CDH7Q9ULB5 785 aa13.15□□□□□ -0.3
SMAD3-205ENST00000558428 ATP8B3O60423 1300 aa13.14□□□□□ -0.31
SMAD3-205ENST00000558428 ZNF638Q14966 1978 aaKnown RBP13.14□□□□□ -0.31
SMAD3-205ENST00000558428 DENND4CQ5VZ89 1909 aa13.14□□□□□ -0.31
SMAD3-205ENST00000558428 KCNJ18B7U540 433 aa13.14□□□□□ -0.31
SMAD3-205ENST00000558428 TRIM66O15016 1216 aa13.14□□□□□ -0.31
SMAD3-205ENST00000558428 CSH1P0DML2 217 aa13.14□□□□□ -0.31
SMAD3-205ENST00000558428 CSH2P0DML3 217 aa13.14□□□□□ -0.31
SMAD3-205ENST00000558428 LAMP2P13473 410 aa13.14□□□□□ -0.31
SMAD3-205ENST00000558428 CEBPBP17676 345 aa13.14□□□□□ -0.31
SMAD3-205ENST00000558428 ANXA13P27216 316 aa13.14□□□□□ -0.31
SMAD3-205ENST00000558428 EPHA5P54756 1037 aa13.14□□□□□ -0.31
SMAD3-205ENST00000558428 YWHAEP62258 255 aaKnown RBP13.14□□□□□ -0.31
SMAD3-205ENST00000558428 KCNJ12Q14500 433 aa13.14□□□□□ -0.31
SMAD3-205ENST00000558428 FAM35AQ86V20 835 aa13.14□□□□□ -0.31
SMAD3-205ENST00000558428 TMC8Q8IU68 726 aa13.14□□□□□ -0.31
SMAD3-205ENST00000558428 NPAS3Q8IXF0 933 aa13.14□□□□□ -0.31
SMAD3-205ENST00000558428 PPM1KQ8N3J5 372 aa13.14□□□□□ -0.31
SMAD3-205ENST00000558428 WHAMMQ8TF30 809 aa13.14□□□□□ -0.31
SMAD3-205ENST00000558428 TUBGCP2Q9BSJ2 902 aa13.14□□□□□ -0.31
SMAD3-205ENST00000558428 LRRC3Q9BY71 257 aa13.14□□□□□ -0.31
SMAD3-205ENST00000558428 ELOVL4Q9GZR5 314 aa13.14□□□□□ -0.31
SMAD3-205ENST00000558428 INTS2Q9H0H0 1204 aaKnown RBP13.14□□□□□ -0.31
SMAD3-205ENST00000558428 FAM49BQ9NUQ9 324 aa13.14□□□□□ -0.31
SMAD3-205ENST00000558428 GCNT4Q9P109 453 aa13.14□□□□□ -0.31
SMAD3-205ENST00000558428 EPS15L1Q9UBC2 864 aa13.14□□□□□ -0.31
SMAD3-205ENST00000558428 MUTYHQ9UIF7 546 aa13.14□□□□□ -0.31
SMAD3-205ENST00000558428 MAGED2Q9UNF1 606 aaPredicted RBP13.14□□□□□ -0.31
SMAD3-205ENST00000558428 ZFP37Q9Y6Q3 630 aaPredicted RBP13.14□□□□□ -0.31
SMAD3-205ENST00000558428 TRIOO75962 3097 aa13.14□□□□□ -0.31
SMAD3-205ENST00000558428 A0A1W2PRU2 124 aa13.13□□□□□ -0.31
SMAD3-205ENST00000558428 SLC38A8A6NNN8 435 aa13.13□□□□□ -0.31
SMAD3-205ENST00000558428 F8VP50 259 aa13.13□□□□□ -0.31
SMAD3-205ENST00000558428 PES1O00541 588 aaKnown RBP13.13□□□□□ -0.31
SMAD3-205ENST00000558428 NRG2O14511 850 aaPredicted RBP13.13□□□□□ -0.31
SMAD3-205ENST00000558428 MOSPD3O75425 235 aa13.13□□□□□ -0.31
SMAD3-205ENST00000558428 LETM1O95202 739 aaPredicted RBP13.13□□□□□ -0.31
SMAD3-205ENST00000558428 FGF19O95750 216 aa13.13□□□□□ -0.31
SMAD3-205ENST00000558428 ASGR2P07307 311 aa13.13□□□□□ -0.31
SMAD3-205ENST00000558428 CCDC130P13994 396 aa13.13□□□□□ -0.31
SMAD3-205ENST00000558428 GJA1P17302 382 aa13.13□□□□□ -0.31
SMAD3-205ENST00000558428 EEF1GP26641 437 aaKnown RBP13.13□□□□□ -0.31
SMAD3-205ENST00000558428 GABRR2P28476 465 aa13.13□□□□□ -0.31
SMAD3-205ENST00000558428 MYL5Q02045 173 aa13.13□□□□□ -0.31
SMAD3-205ENST00000558428 MTMR3Q13615 1198 aa13.13□□□□□ -0.31
SMAD3-205ENST00000558428 SKOR2Q2VWA4 1001 aaPredicted RBP13.13□□□□□ -0.31
SMAD3-205ENST00000558428 ANO6Q4KMQ2 910 aa13.13□□□□□ -0.31
SMAD3-205ENST00000558428 TCP11X2Q5H9J9 407 aa13.13□□□□□ -0.31
SMAD3-205ENST00000558428 GBP6Q6ZN66 633 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms