RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 TLDC2A0PJX2 215 aa8.76□□□□□ -1.01
SPG11-209ENST00000558253 RRN3P2A6NIE6 340 aa8.76□□□□□ -1.01
SPG11-209ENST00000558253 ZNF487B1APH4 448 aa8.76□□□□□ -1.01
SPG11-209ENST00000558253 RNF8O76064 485 aa8.76□□□□□ -1.01
SPG11-209ENST00000558253 ARIH2O95376 493 aa8.76□□□□□ -1.01
SPG11-209ENST00000558253 KRT1P04264 644 aa8.76□□□□□ -1.01
SPG11-209ENST00000558253 SHBGP04278 402 aa8.76□□□□□ -1.01
SPG11-209ENST00000558253 SETSIPP0DME0 302 aa8.76□□□□□ -1.01
SPG11-209ENST00000558253 CETPP11597 493 aa8.76□□□□□ -1.01
SPG11-209ENST00000558253 HARSP12081 509 aaKnown RBP8.76□□□□□ -1.01
SPG11-209ENST00000558253 KLRC2P26717 231 aa8.76□□□□□ -1.01
SPG11-209ENST00000558253 TNFSF9P41273 254 aa8.76□□□□□ -1.01
SPG11-209ENST00000558253 VCPP55072 806 aaKnown RBP8.76□□□□□ -1.01
SPG11-209ENST00000558253 TAS2R40P59535 323 aa8.76□□□□□ -1.01
SPG11-209ENST00000558253 SNX1Q13596 522 aa8.76□□□□□ -1.01
SPG11-209ENST00000558253 MOGSQ13724 837 aa8.76□□□□□ -1.01
SPG11-209ENST00000558253 AUHQ13825 339 aaKnown RBP8.76□□□□□ -1.01
SPG11-209ENST00000558253 PRKG1Q13976 671 aa8.76□□□□□ -1.01
SPG11-209ENST00000558253 DCAF4L1Q3SXM0 396 aa8.76□□□□□ -1.01
SPG11-209ENST00000558253 LACTB2Q53H82 288 aaPredicted RBP8.76□□□□□ -1.01
SPG11-209ENST00000558253 ZC3H12AQ5D1E8 599 aaKnown RBP8.76□□□□□ -1.01
SPG11-209ENST00000558253 LDLRAD1Q5T700 205 aa8.76□□□□□ -1.01
SPG11-209ENST00000558253 MAMDC4Q6UXC1 1216 aa8.76□□□□□ -1.01
SPG11-209ENST00000558253 ARHGEF18Q6ZSZ5 1173 aa8.76□□□□□ -1.01
SPG11-209ENST00000558253 CCDC121Q6ZUS5 278 aa8.76□□□□□ -1.01
SPG11-209ENST00000558253 CCDC91Q7Z6B0 441 aa8.76□□□□□ -1.01
SPG11-209ENST00000558253 ZDHHC17Q8IUH5 632 aa8.76□□□□□ -1.01
SPG11-209ENST00000558253 C10orf67Q8IYJ2 551 aa8.76□□□□□ -1.01
SPG11-209ENST00000558253 ALLCQ8N6M5 410 aa8.76□□□□□ -1.01
SPG11-209ENST00000558253 ATXN2LQ8WWM7 1075 aaKnown RBP8.76□□□□□ -1.01
SPG11-209ENST00000558253 GRAMD1AQ96CP6 724 aa8.76□□□□□ -1.01
SPG11-209ENST00000558253 OPTNQ96CV9 577 aa8.76□□□□□ -1.01
SPG11-209ENST00000558253 TMEM176AQ96HP8 235 aa8.76□□□□□ -1.01
SPG11-209ENST00000558253 FGD4Q96M96 766 aa8.76□□□□□ -1.01
SPG11-209ENST00000558253 BEGAINQ9BUH8 593 aa8.76□□□□□ -1.01
SPG11-209ENST00000558253 CDT1Q9H211 546 aa8.76□□□□□ -1.01
SPG11-209ENST00000558253 CDC42EP4Q9H3Q1 356 aaKnown RBP8.76□□□□□ -1.01
SPG11-209ENST00000558253 CHST7Q9NS84 486 aa8.76□□□□□ -1.01
SPG11-209ENST00000558253 ASNSD1Q9NWL6 643 aa8.76□□□□□ -1.01
SPG11-209ENST00000558253 SLC5A4Q9NY91 659 aa8.76□□□□□ -1.01
SPG11-209ENST00000558253 SAMD15Q9P1V8 674 aa8.76□□□□□ -1.01
SPG11-209ENST00000558253 CHORDC1Q9UHD1 332 aaPredicted RBP8.76□□□□□ -1.01
SPG11-209ENST00000558253 ZNF148Q9UQR1 794 aa8.76□□□□□ -1.01
SPG11-209ENST00000558253 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.76□□□□□ -1.01
SPG11-209ENST00000558253 WDR81Q562E7 1941 aa8.76□□□□□ -1.01
SPG11-209ENST00000558253 hCG_1818297A0A087WSY0 165 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 IQCA1LA6NCM1 817 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 ADM5C9JUS6 153 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 DNALI1O14645 258 aaPredicted RBP8.75□□□□□ -1.01
SPG11-209ENST00000558253 ALOX15BO15296 676 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 TP73O15350 636 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 KIF1CO43896 1103 aaKnown RBP8.75□□□□□ -1.01
SPG11-209ENST00000558253 DDNO94850 711 aaPredicted RBP8.75□□□□□ -1.01
SPG11-209ENST00000558253 ERBB2P04626 1255 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 GSTA1P08263 222 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 FAM163BP0C2L3 166 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 STAG3L1P0CL83 205 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 HOXD8P13378 290 aaPredicted RBP8.75□□□□□ -1.01
SPG11-209ENST00000558253 CHN1P15882 459 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 DRD4P21917 467 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 PSMA2P25787 234 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 STIP1P31948 543 aaKnown RBP8.75□□□□□ -1.01
SPG11-209ENST00000558253 PHBP35232 272 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 CDKN2BP42772 138 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 MAGEA4P43358 317 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 RAD23BP54727 409 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 PSMC1P62191 440 aaKnown RBP8.75□□□□□ -1.01
SPG11-209ENST00000558253 FKBP1BP68106 108 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 ARHGAP1Q07960 439 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 INCA1Q0VD86 236 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 MYO1EQ12965 1108 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 TFDP2Q14188 446 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 TMEM132DQ14C87 1099 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 ZNF792Q3KQV3 632 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 TTC31Q49AM3 519 aaPredicted RBP8.75□□□□□ -1.01
SPG11-209ENST00000558253 FAM47CQ5HY64 1035 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 ZFYVE27Q5T4F4 411 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 IZUMO3Q5VZ72 239 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 IQSEC1Q6DN90 963 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 BBS12Q6ZW61 710 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 CENPUQ71F23 418 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 ARMCX2Q7L311 632 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 CCDC25Q86WR0 208 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 PASD1Q8IV76 773 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 MAP7D3Q8IWC1 876 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 SUGP1Q8IWZ8 645 aaKnown RBP8.75□□□□□ -1.01
SPG11-209ENST00000558253 WDTC1Q8N5D0 677 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 LINC01465Q8N7H1 131 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 GBP7Q8N8V2 638 aaPredicted RBP8.75□□□□□ -1.01
SPG11-209ENST00000558253 CCDC197Q8NCU1 140 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 CMASQ8NFW8 434 aaPredicted RBP8.75□□□□□ -1.01
SPG11-209ENST00000558253 NLGN2Q8NFZ4 835 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 STK32AQ8WU08 396 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 USP6NLQ92738 828 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 SLC10A4Q96EP9 437 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 SGSM3Q96HU1 749 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 SEC16BQ96JE7 1060 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 NLRP4Q96MN2 994 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 ACAP3Q96P50 834 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 MCEEQ96PE7 176 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms