RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 C4BPAP04003 597 aaKnown RBP9.4□□□□□ -0.9
SNRPA1-206ENST00000558059 PDGFRBP09619 1106 aa9.4□□□□□ -0.9
SNRPA1-206ENST00000558059 FAM163BP0C2L3 166 aa9.4□□□□□ -0.9
SNRPA1-206ENST00000558059 DLG4P78352 724 aa9.4□□□□□ -0.9
SNRPA1-206ENST00000558059 PFKPQ01813 784 aa9.4□□□□□ -0.9
SNRPA1-206ENST00000558059 PRKCQQ04759 706 aa9.4□□□□□ -0.9
SNRPA1-206ENST00000558059 GRM2Q14416 872 aa9.4□□□□□ -0.9
SNRPA1-206ENST00000558059 VEPH1Q14D04 833 aa9.4□□□□□ -0.9
SNRPA1-206ENST00000558059 MLF2Q15773 248 aaPredicted RBP9.4□□□□□ -0.9
SNRPA1-206ENST00000558059 NFIL3Q16649 462 aa9.4□□□□□ -0.9
SNRPA1-206ENST00000558059 C1orf220Q5T0J3 134 aa9.4□□□□□ -0.9
SNRPA1-206ENST00000558059 SDHAF4Q5VUM1 108 aa9.4□□□□□ -0.9
SNRPA1-206ENST00000558059 TDRD10Q5VZ19 366 aaKnown RBP9.4□□□□□ -0.9
SNRPA1-206ENST00000558059 ADGRD1Q6QNK2 874 aa9.4□□□□□ -0.9
SNRPA1-206ENST00000558059 VITQ6UXI7 678 aa9.4□□□□□ -0.9
SNRPA1-206ENST00000558059 TMEM150AQ86TG1 271 aa9.4□□□□□ -0.9
SNRPA1-206ENST00000558059 GPIHBP1Q8IV16 184 aa9.4□□□□□ -0.9
SNRPA1-206ENST00000558059 ARID3BQ8IVW6 561 aaPredicted RBP9.4□□□□□ -0.9
SNRPA1-206ENST00000558059 MFSD6LQ8IWD5 586 aa9.4□□□□□ -0.9
SNRPA1-206ENST00000558059 CCDC105Q8IYK2 499 aa9.4□□□□□ -0.9
SNRPA1-206ENST00000558059 GUF1Q8N442 669 aaKnown RBP9.4□□□□□ -0.9
SNRPA1-206ENST00000558059 DTWD2Q8NBA8 298 aa9.4□□□□□ -0.9
SNRPA1-206ENST00000558059 FAM200AQ8TCP9 573 aa9.4□□□□□ -0.9
SNRPA1-206ENST00000558059 CCDC47Q96A33 483 aaKnown RBP9.4□□□□□ -0.9
SNRPA1-206ENST00000558059 SHDQ96IW2 340 aa9.4□□□□□ -0.9
SNRPA1-206ENST00000558059 LRRC3BQ96PB8 259 aa9.4□□□□□ -0.9
SNRPA1-206ENST00000558059 MMS19Q96T76 1030 aa9.4□□□□□ -0.9
SNRPA1-206ENST00000558059 PHOX2BQ99453 314 aa9.4□□□□□ -0.9
SNRPA1-206ENST00000558059 SYT15Q9BQS2 421 aa9.4□□□□□ -0.9
SNRPA1-206ENST00000558059 MRPL45Q9BRJ2 306 aaKnown RBP9.4□□□□□ -0.9
SNRPA1-206ENST00000558059 TRMT61BQ9BVS5 477 aaKnown RBP9.4□□□□□ -0.9
SNRPA1-206ENST00000558059 FOXQ1Q9C009 403 aa9.4□□□□□ -0.9
SNRPA1-206ENST00000558059 ATXN3LQ9H3M9 355 aa9.4□□□□□ -0.9
SNRPA1-206ENST00000558059 SLITRK6Q9H5Y7 841 aa9.4□□□□□ -0.9
SNRPA1-206ENST00000558059 VRTNQ9H8Y1 702 aa9.4□□□□□ -0.9
SNRPA1-206ENST00000558059 CRTAC1Q9NQ79 661 aa9.4□□□□□ -0.9
SNRPA1-206ENST00000558059 DLGAP2Q9P1A6 1054 aa9.4□□□□□ -0.9
SNRPA1-206ENST00000558059 CDH9Q9ULB4 789 aa9.4□□□□□ -0.9
SNRPA1-206ENST00000558059 MAPK8IP1Q9UQF2 711 aa9.4□□□□□ -0.9
SNRPA1-206ENST00000558059 KIF26AQ9ULI4 1882 aaPredicted RBP9.4□□□□□ -0.91
SNRPA1-206ENST00000558059 COL4A2P08572 1712 aa9.39□□□□□ -0.91
SNRPA1-206ENST00000558059 CALUO43852 315 aaPredicted RBP9.39□□□□□ -0.91
SNRPA1-206ENST00000558059 NOL4O94818 638 aa9.39□□□□□ -0.91
SNRPA1-206ENST00000558059 KIF20AO95235 890 aa9.39□□□□□ -0.91
SNRPA1-206ENST00000558059 VNN1O95497 513 aa9.39□□□□□ -0.91
SNRPA1-206ENST00000558059 F11P03951 625 aa9.39□□□□□ -0.91
SNRPA1-206ENST00000558059 DCNP07585 359 aaKnown RBP9.39□□□□□ -0.91
SNRPA1-206ENST00000558059 GLULP15104 373 aa9.39□□□□□ -0.91
SNRPA1-206ENST00000558059 PSMC3P17980 439 aa9.39□□□□□ -0.91
SNRPA1-206ENST00000558059 WEE1P30291 646 aa9.39□□□□□ -0.91
SNRPA1-206ENST00000558059 CDC25CP30307 473 aa9.39□□□□□ -0.91
SNRPA1-206ENST00000558059 GDI1P31150 447 aa9.39□□□□□ -0.91
SNRPA1-206ENST00000558059 ATICP31939 592 aa9.39□□□□□ -0.91
SNRPA1-206ENST00000558059 GNL1P36915 607 aaPredicted RBP9.39□□□□□ -0.91
SNRPA1-206ENST00000558059 MAGEA11P43364 429 aa9.39□□□□□ -0.91
SNRPA1-206ENST00000558059 AP3M2P53677 418 aa9.39□□□□□ -0.91
SNRPA1-206ENST00000558059 PSMC1P62191 440 aaKnown RBP9.39□□□□□ -0.91
SNRPA1-206ENST00000558059 CYP4F8P98187 520 aa9.39□□□□□ -0.91
SNRPA1-206ENST00000558059 TRPC3Q13507 836 aa9.39□□□□□ -0.91
SNRPA1-206ENST00000558059 PNOCQ13519 176 aa9.39□□□□□ -0.91
SNRPA1-206ENST00000558059 NCOA4Q13772 614 aa9.39□□□□□ -0.91
SNRPA1-206ENST00000558059 DDR2Q16832 855 aa9.39□□□□□ -0.91
SNRPA1-206ENST00000558059 WDR72Q3MJ13 1102 aa9.39□□□□□ -0.91
SNRPA1-206ENST00000558059 CFAP221Q4G0U5 840 aa9.39□□□□□ -0.91
SNRPA1-206ENST00000558059 ZCWPW2Q504Y3 356 aa9.39□□□□□ -0.91
SNRPA1-206ENST00000558059 GPR158Q5T848 1215 aa9.39□□□□□ -0.91
SNRPA1-206ENST00000558059 CEP135Q66GS9 1140 aa9.39□□□□□ -0.91
SNRPA1-206ENST00000558059 SPATA2LQ8IUW3 424 aaPredicted RBP9.39□□□□□ -0.91
SNRPA1-206ENST00000558059 STKLD1Q8NE28 680 aa9.39□□□□□ -0.91
SNRPA1-206ENST00000558059 PJA1Q8NG27 643 aa9.39□□□□□ -0.91
SNRPA1-206ENST00000558059 TMC2Q8TDI7 906 aa9.39□□□□□ -0.91
SNRPA1-206ENST00000558059 DEPDC1BQ8WUY9 529 aa9.39□□□□□ -0.91
SNRPA1-206ENST00000558059 SYAP1Q96A49 352 aaPredicted RBP9.39□□□□□ -0.91
SNRPA1-206ENST00000558059 FUBP3Q96I24 572 aaKnown RBP eCLIP9.39□□□□□ -0.91
SNRPA1-206ENST00000558059 SLC46A2Q9BY10 475 aa9.39□□□□□ -0.91
SNRPA1-206ENST00000558059 TASP1Q9H6P5 420 aa9.39□□□□□ -0.91
SNRPA1-206ENST00000558059 BRD9Q9H8M2 597 aa9.39□□□□□ -0.91
SNRPA1-206ENST00000558059 NXF1Q9UBU9 619 aaKnown RBP9.39□□□□□ -0.91
SNRPA1-206ENST00000558059 SIT1Q9Y3P8 196 aa9.39□□□□□ -0.91
SNRPA1-206ENST00000558059 MTF2Q9Y483 593 aaPredicted RBP9.39□□□□□ -0.91
SNRPA1-206ENST00000558059 ATG2BQ96BY7 2078 aa9.39□□□□□ -0.91
SNRPA1-206ENST00000558059 FANCMQ8IYD8 2048 aa9.39□□□□□ -0.91
SNRPA1-206ENST00000558059 EP300Q09472 2414 aaPredicted RBP9.39□□□□□ -0.91
SNRPA1-206ENST00000558059 KANSL1LA0AUZ9 987 aa9.38□□□□□ -0.91
SNRPA1-206ENST00000558059 GOLGA6L4A6NEF3 574 aa9.38□□□□□ -0.91
SNRPA1-206ENST00000558059 SLC38A8A6NNN8 435 aa9.38□□□□□ -0.91
SNRPA1-206ENST00000558059 ARNTLO00327 626 aa9.38□□□□□ -0.91
SNRPA1-206ENST00000558059 IKBKBO14920 756 aa9.38□□□□□ -0.91
SNRPA1-206ENST00000558059 MAPK13O15264 365 aa9.38□□□□□ -0.91
SNRPA1-206ENST00000558059 PHACTR2O75167 634 aa9.38□□□□□ -0.91
SNRPA1-206ENST00000558059 LRRN2O75325 713 aa9.38□□□□□ -0.91
SNRPA1-206ENST00000558059 AKAP3O75969 853 aa9.38□□□□□ -0.91
SNRPA1-206ENST00000558059 PRAMEF12O95522 483 aa9.38□□□□□ -0.91
SNRPA1-206ENST00000558059 CSH1P0DML2 217 aa9.38□□□□□ -0.91
SNRPA1-206ENST00000558059 CSH2P0DML3 217 aa9.38□□□□□ -0.91
SNRPA1-206ENST00000558059 CD72P21854 359 aa9.38□□□□□ -0.91
SNRPA1-206ENST00000558059 RFX1P22670 979 aa9.38□□□□□ -0.91
SNRPA1-206ENST00000558059 NR2F2P24468 414 aa9.38□□□□□ -0.91
SNRPA1-206ENST00000558059 CDH8P55286 799 aa9.38□□□□□ -0.91
SNRPA1-206ENST00000558059 NLRP12P59046 1061 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms