RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 MYL5Q02045 173 aa11.28□□□□□ -0.6
HNRNPC-232ENST00000557442 INCA1Q0VD86 236 aa11.28□□□□□ -0.6
HNRNPC-232ENST00000557442 KCNJ12Q14500 433 aa11.28□□□□□ -0.6
HNRNPC-232ENST00000557442 MAN2A1Q16706 1144 aa11.28□□□□□ -0.6
HNRNPC-232ENST00000557442 CFAP221Q4G0U5 840 aa11.28□□□□□ -0.6
HNRNPC-232ENST00000557442 ANO6Q4KMQ2 910 aa11.28□□□□□ -0.6
HNRNPC-232ENST00000557442 OTOP3Q7RTS5 596 aa11.28□□□□□ -0.6
HNRNPC-232ENST00000557442 ACOT1Q86TX2 421 aa11.28□□□□□ -0.6
HNRNPC-232ENST00000557442 UNC93AQ86WB7 457 aa11.28□□□□□ -0.6
HNRNPC-232ENST00000557442 GJD3Q8N144 294 aa11.28□□□□□ -0.6
HNRNPC-232ENST00000557442 TATDN2Q93075 761 aa11.28□□□□□ -0.6
HNRNPC-232ENST00000557442 ACSF2Q96CM8 615 aaPredicted RBP11.28□□□□□ -0.6
HNRNPC-232ENST00000557442 FUBP3Q96I24 572 aaKnown RBP eCLIP11.28□□□□□ -0.69e-8■■□□□ 14.1
HNRNPC-232ENST00000557442 FAXDC2Q96IV6 333 aa11.28□□□□□ -0.6
HNRNPC-232ENST00000557442 NT5C1BQ96P26 610 aa11.28□□□□□ -0.6
HNRNPC-232ENST00000557442 LPIN3Q9BQK8 851 aa11.28□□□□□ -0.6
HNRNPC-232ENST00000557442 NAT10Q9H0A0 1025 aaKnown RBP11.28□□□□□ -0.6
HNRNPC-232ENST00000557442 ASAH2Q9NR71 780 aa11.28□□□□□ -0.6
HNRNPC-232ENST00000557442 SAMSN1Q9NSI8 373 aaKnown RBP11.28□□□□□ -0.6
HNRNPC-232ENST00000557442 ATP8B3O60423 1300 aa11.27□□□□□ -0.61
HNRNPC-232ENST00000557442 C19orf67A6NJJ6 358 aa11.27□□□□□ -0.61
HNRNPC-232ENST00000557442 PES1O00541 588 aaKnown RBP11.27□□□□□ -0.61
HNRNPC-232ENST00000557442 CILPO75339 1184 aa11.27□□□□□ -0.61
HNRNPC-232ENST00000557442 LETM1O95202 739 aaPredicted RBP11.27□□□□□ -0.61
HNRNPC-232ENST00000557442 MYL4P12829 197 aa11.27□□□□□ -0.61
HNRNPC-232ENST00000557442 BDNFP23560 247 aa11.27□□□□□ -0.61
HNRNPC-232ENST00000557442 TBXAS1P24557 533 aaPredicted RBP11.27□□□□□ -0.61
HNRNPC-232ENST00000557442 EEF1GP26641 437 aaKnown RBP11.27□□□□□ -0.61
HNRNPC-232ENST00000557442 GPR15P49685 360 aa11.27□□□□□ -0.61
HNRNPC-232ENST00000557442 RPL10AP62906 217 aaKnown RBP11.27□□□□□ -0.61
HNRNPC-232ENST00000557442 CUL2Q13617 745 aa11.27□□□□□ -0.61
HNRNPC-232ENST00000557442 TAF12Q16514 161 aa11.27□□□□□ -0.61
HNRNPC-232ENST00000557442 SLC5A9Q2M3M2 681 aa11.27□□□□□ -0.61
HNRNPC-232ENST00000557442 SKOR2Q2VWA4 1001 aaPredicted RBP11.27□□□□□ -0.61
HNRNPC-232ENST00000557442 PDZD4Q76G19 769 aaPredicted RBP11.27□□□□□ -0.61
HNRNPC-232ENST00000557442 ITIH5Q86UX2 942 aa11.27□□□□□ -0.61
HNRNPC-232ENST00000557442 SCN4BQ8IWT1 228 aa11.27□□□□□ -0.61
HNRNPC-232ENST00000557442 HS6ST3Q8IZP7 471 aa11.27□□□□□ -0.61
HNRNPC-232ENST00000557442 PPM1KQ8N3J5 372 aa11.27□□□□□ -0.61
HNRNPC-232ENST00000557442 TTC39CQ8N584 583 aa11.27□□□□□ -0.61
HNRNPC-232ENST00000557442 STKLD1Q8NE28 680 aa11.27□□□□□ -0.61
HNRNPC-232ENST00000557442 GPR152Q8TDT2 470 aa11.27□□□□□ -0.61
HNRNPC-232ENST00000557442 GIPC2Q8TF65 315 aa11.27□□□□□ -0.61
HNRNPC-232ENST00000557442 ING5Q8WYH8 240 aa11.27□□□□□ -0.61
HNRNPC-232ENST00000557442 PSMG2Q969U7 264 aa11.27□□□□□ -0.61
HNRNPC-232ENST00000557442 TWNKQ96RR1 684 aa11.27□□□□□ -0.61
HNRNPC-232ENST00000557442 TUBGCP2Q9BSJ2 902 aa11.27□□□□□ -0.61
HNRNPC-232ENST00000557442 MED10Q9BTT4 135 aa11.27□□□□□ -0.61
HNRNPC-232ENST00000557442 NT5C1AQ9BXI3 368 aa11.27□□□□□ -0.61
HNRNPC-232ENST00000557442 ELOVL4Q9GZR5 314 aa11.27□□□□□ -0.61
HNRNPC-232ENST00000557442 DNAI2Q9GZS0 605 aa11.27□□□□□ -0.61
HNRNPC-232ENST00000557442 INTS2Q9H0H0 1204 aaKnown RBP11.27□□□□□ -0.61
HNRNPC-232ENST00000557442 CD320Q9NPF0 282 aa11.27□□□□□ -0.61
HNRNPC-232ENST00000557442 CISHQ9NSE2 258 aa11.27□□□□□ -0.61
HNRNPC-232ENST00000557442 FAM49BQ9NUQ9 324 aa11.27□□□□□ -0.61
HNRNPC-232ENST00000557442 USTQ9Y2C2 406 aa11.27□□□□□ -0.61
HNRNPC-232ENST00000557442 MRPS23Q9Y3D9 190 aaKnown RBP11.27□□□□□ -0.61
HNRNPC-232ENST00000557442 ASB3Q9Y575 518 aa11.27□□□□□ -0.61
HNRNPC-232ENST00000557442 CLDN5O00501 218 aa11.26□□□□□ -0.61
HNRNPC-232ENST00000557442 CCDC130P13994 396 aa11.26□□□□□ -0.61
HNRNPC-232ENST00000557442 ANXA13P27216 316 aa11.26□□□□□ -0.61
HNRNPC-232ENST00000557442 GRIK1P39086 918 aa11.26□□□□□ -0.61
HNRNPC-232ENST00000557442 MAGEA11P43364 429 aa11.26□□□□□ -0.61
HNRNPC-232ENST00000557442 YWHAEP62258 255 aaKnown RBP11.26□□□□□ -0.61
HNRNPC-232ENST00000557442 DDR2Q16832 855 aa11.26□□□□□ -0.61
HNRNPC-232ENST00000557442 ZNF394Q53GI3 561 aa11.26□□□□□ -0.61
HNRNPC-232ENST00000557442 TCP11X2Q5H9J9 407 aa11.26□□□□□ -0.61
HNRNPC-232ENST00000557442 CYP4A22Q5TCH4 519 aa11.26□□□□□ -0.61
HNRNPC-232ENST00000557442 SDHAF4Q5VUM1 108 aa11.26□□□□□ -0.61
HNRNPC-232ENST00000557442 CDKAL1Q5VV42 579 aa11.26□□□□□ -0.61
HNRNPC-232ENST00000557442 VSTM1Q6UX27 236 aa11.26□□□□□ -0.61
HNRNPC-232ENST00000557442 DNAJB7Q7Z6W7 309 aaPredicted RBP11.26□□□□□ -0.61
HNRNPC-232ENST00000557442 FAM35AQ86V20 835 aa11.26□□□□□ -0.61
HNRNPC-232ENST00000557442 AOPEPQ8N6M6 819 aa11.26□□□□□ -0.61
HNRNPC-232ENST00000557442 LEMD2Q8NC56 503 aa11.26□□□□□ -0.61
HNRNPC-232ENST00000557442 LMO3Q8TAP4 145 aa11.26□□□□□ -0.61
HNRNPC-232ENST00000557442 ITFG1Q8TB96 612 aa11.26□□□□□ -0.61
HNRNPC-232ENST00000557442 MYADMQ96S97 322 aa11.26□□□□□ -0.61
HNRNPC-232ENST00000557442 CRACR2AQ9BSW2 395 aa11.26□□□□□ -0.61
HNRNPC-232ENST00000557442 B3GNT5Q9BYG0 378 aa11.26□□□□□ -0.61
HNRNPC-232ENST00000557442 ZNF518BQ9C0D4 1074 aa11.26□□□□□ -0.61
HNRNPC-232ENST00000557442 AVENQ9NQS1 362 aaPredicted RBP11.26□□□□□ -0.61
HNRNPC-232ENST00000557442 KRT82Q9NSB4 513 aa11.26□□□□□ -0.61
HNRNPC-232ENST00000557442 FANCLQ9NW38 375 aa11.26□□□□□ -0.61
HNRNPC-232ENST00000557442 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.26□□□□□ -0.61
HNRNPC-232ENST00000557442 MIA3Q5JRA6 1907 aa11.26□□□□□ -0.61
HNRNPC-232ENST00000557442 ZNF197O14709 1029 aa11.25□□□□□ -0.61
HNRNPC-232ENST00000557442 TRIM66O15016 1216 aa11.25□□□□□ -0.61
HNRNPC-232ENST00000557442 CEBPBP17676 345 aa11.25□□□□□ -0.61
HNRNPC-232ENST00000557442 CCR2P41597 374 aa11.25□□□□□ -0.61
HNRNPC-232ENST00000557442 EPHA5P54756 1037 aa11.25□□□□□ -0.61
HNRNPC-232ENST00000557442 ZSCAN23Q3MJ62 389 aa11.25□□□□□ -0.61
HNRNPC-232ENST00000557442 VWA3BQ502W6 1294 aa11.25□□□□□ -0.61
HNRNPC-232ENST00000557442 MIIPQ5JXC2 388 aa11.25□□□□□ -0.61
HNRNPC-232ENST00000557442 PRSS36Q5K4E3 855 aa11.25□□□□□ -0.61
HNRNPC-232ENST00000557442 TRIM65Q6PJ69 517 aa11.25□□□□□ -0.61
HNRNPC-232ENST00000557442 GBP6Q6ZN66 633 aa11.25□□□□□ -0.61
HNRNPC-232ENST00000557442 TMC8Q8IU68 726 aa11.25□□□□□ -0.61
HNRNPC-232ENST00000557442 RNF135Q8IUD6 432 aa11.25□□□□□ -0.61
HNRNPC-232ENST00000557442 ARHGEF19Q8IW93 802 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms