RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 MATKP42679 507 aa6.3□□□□□ -1.4
ATXN3-245ENST00000556958 PSMC5P62195 406 aa6.3□□□□□ -1.4
ATXN3-245ENST00000556958 PTH1RQ03431 593 aa6.3□□□□□ -1.4
ATXN3-245ENST00000556958 NFATC3Q12968 1075 aa6.3□□□□□ -1.4
ATXN3-245ENST00000556958 GRIK2Q13002 908 aa6.3□□□□□ -1.4
ATXN3-245ENST00000556958 MRPL58Q14197 206 aaKnown RBP6.3□□□□□ -1.4
ATXN3-245ENST00000556958 CCDC157Q569K6 752 aa6.3□□□□□ -1.4
ATXN3-245ENST00000556958 TRIM68Q6AZZ1 485 aa6.3□□□□□ -1.4
ATXN3-245ENST00000556958 ZNF280DQ6N043 979 aa6.3□□□□□ -1.4
ATXN3-245ENST00000556958 DHRS13Q6UX07 377 aa6.3□□□□□ -1.4
ATXN3-245ENST00000556958 GAREM2Q75VX8 874 aa6.3□□□□□ -1.4
ATXN3-245ENST00000556958 DNAJB7Q7Z6W7 309 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-245ENST00000556958 FERMT3Q86UX7 667 aa6.3□□□□□ -1.4
ATXN3-245ENST00000556958 TMC8Q8IU68 726 aa6.3□□□□□ -1.4
ATXN3-245ENST00000556958 ZNF654Q8IZM8 581 aa6.3□□□□□ -1.4
ATXN3-245ENST00000556958 CMTM8Q8IZV2 173 aa6.3□□□□□ -1.4
ATXN3-245ENST00000556958 VWA5B2Q8N398 1253 aa6.3□□□□□ -1.4
ATXN3-245ENST00000556958 DEFB119Q8N690 84 aa6.3□□□□□ -1.4
ATXN3-245ENST00000556958 ZNF713Q8N859 430 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-245ENST00000556958 FRMD1Q8N878 549 aa6.3□□□□□ -1.4
ATXN3-245ENST00000556958 TRIML1Q8N9V2 468 aa6.3□□□□□ -1.4
ATXN3-245ENST00000556958 APPL2Q8NEU8 664 aa6.3□□□□□ -1.4
ATXN3-245ENST00000556958 BAHD1Q8TBE0 780 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-245ENST00000556958 OTUD7AQ8TE49 926 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-245ENST00000556958 HMGB4Q8WW32 186 aa6.3□□□□□ -1.4
ATXN3-245ENST00000556958 TTC9Q92623 222 aa6.3□□□□□ -1.4
ATXN3-245ENST00000556958 ATP2A3Q93084 1043 aa6.3□□□□□ -1.4
ATXN3-245ENST00000556958 CEP170P1Q96L14 293 aa6.3□□□□□ -1.4
ATXN3-245ENST00000556958 OCSTAMPQ9BR26 566 aa6.3□□□□□ -1.4
ATXN3-245ENST00000556958 ALG2Q9H553 416 aa6.3□□□□□ -1.4
ATXN3-245ENST00000556958 DHX33Q9H6R0 707 aaKnown RBP6.3□□□□□ -1.4
ATXN3-245ENST00000556958 GAREM1Q9H706 876 aa6.3□□□□□ -1.4
ATXN3-245ENST00000556958 GPRC5CQ9NQ84 441 aa6.3□□□□□ -1.4
ATXN3-245ENST00000556958 TDP1Q9NUW8 608 aa6.3□□□□□ -1.4
ATXN3-245ENST00000556958 YIPF1Q9Y548 306 aa6.3□□□□□ -1.4
ATXN3-245ENST00000556958 TICRRQ7Z2Z1 1910 aa6.3□□□□□ -1.4
ATXN3-245ENST00000556958 LRRK2Q5S007 2527 aa6.29□□□□□ -1.4
ATXN3-245ENST00000556958 A0A1B0GTW7 788 aa6.29□□□□□ -1.4
ATXN3-245ENST00000556958 hCG_1642624A0A1W2PR95 340 aa6.29□□□□□ -1.4
ATXN3-245ENST00000556958 SLC35F4A4IF30 521 aa6.29□□□□□ -1.4
ATXN3-245ENST00000556958 NDUFS2O75306 463 aa6.29□□□□□ -1.4
ATXN3-245ENST00000556958 CILPO75339 1184 aa6.29□□□□□ -1.4
ATXN3-245ENST00000556958 STBD1O95210 358 aa6.29□□□□□ -1.4
ATXN3-245ENST00000556958 PLEKHA8P1O95397 391 aa6.29□□□□□ -1.4
ATXN3-245ENST00000556958 C1SP09871 688 aa6.29□□□□□ -1.4
ATXN3-245ENST00000556958 ARSAP15289 507 aa6.29□□□□□ -1.4
ATXN3-245ENST00000556958 SDSP20132 328 aa6.29□□□□□ -1.4
ATXN3-245ENST00000556958 U2AF2P26368 475 aaKnown RBP eCLIP6.29□□□□□ -1.4
ATXN3-245ENST00000556958 MARCKSP29966 332 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-245ENST00000556958 CIITAP33076 1130 aa6.29□□□□□ -1.4
ATXN3-245ENST00000556958 GRK6P43250 576 aa6.29□□□□□ -1.4
ATXN3-245ENST00000556958 BRCC3P46736 316 aa6.29□□□□□ -1.4
ATXN3-245ENST00000556958 USP11P51784 963 aa6.29□□□□□ -1.4
ATXN3-245ENST00000556958 CLCNKBP51801 687 aa6.29□□□□□ -1.4
ATXN3-245ENST00000556958 SEC13P55735 322 aa6.29□□□□□ -1.4
ATXN3-245ENST00000556958 VEPH1Q14D04 833 aa6.29□□□□□ -1.4
ATXN3-245ENST00000556958 NAB2Q15742 525 aa6.29□□□□□ -1.4
ATXN3-245ENST00000556958 TAF12Q16514 161 aa6.29□□□□□ -1.4
ATXN3-245ENST00000556958 UPP1Q16831 310 aa6.29□□□□□ -1.4
ATXN3-245ENST00000556958 INAVAQ3KP66 663 aa6.29□□□□□ -1.4
ATXN3-245ENST00000556958 LRCH2Q5VUJ6 765 aa6.29□□□□□ -1.4
ATXN3-245ENST00000556958 JAKMIP3Q5VZ66 844 aa6.29□□□□□ -1.4
ATXN3-245ENST00000556958 NFXL1Q6ZNB6 911 aa6.29□□□□□ -1.4
ATXN3-245ENST00000556958 ANO5Q75V66 913 aa6.29□□□□□ -1.4
ATXN3-245ENST00000556958 OTUD6AQ7L8S5 288 aa6.29□□□□□ -1.4
ATXN3-245ENST00000556958 NCOA7Q8NI08 942 aa6.29□□□□□ -1.4
ATXN3-245ENST00000556958 FAM174AQ8TBP5 190 aa6.29□□□□□ -1.4
ATXN3-245ENST00000556958 IGDCC4Q8TDY8 1250 aa6.29□□□□□ -1.4
ATXN3-245ENST00000556958 SNRNP27Q8WVK2 155 aaKnown RBP6.29□□□□□ -1.4
ATXN3-245ENST00000556958 EZH1Q92800 747 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-245ENST00000556958 PSMG2Q969U7 264 aa6.29□□□□□ -1.4
ATXN3-245ENST00000556958 RILPL2Q969X0 211 aa6.29□□□□□ -1.4
ATXN3-245ENST00000556958 ZNF419Q96HQ0 510 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-245ENST00000556958 HSPA12BQ96MM6 686 aa6.29□□□□□ -1.4
ATXN3-245ENST00000556958 ADPGKQ9BRR6 497 aa6.29□□□□□ -1.4
ATXN3-245ENST00000556958 POLR3CQ9BUI4 534 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-245ENST00000556958 SLC46A2Q9BY10 475 aa6.29□□□□□ -1.4
ATXN3-245ENST00000556958 UNC45AQ9H3U1 944 aa6.29□□□□□ -1.4
ATXN3-245ENST00000556958 LRRC4CQ9HCJ2 640 aa6.29□□□□□ -1.4
ATXN3-245ENST00000556958 NUB1Q9Y5A7 615 aa6.29□□□□□ -1.4
ATXN3-245ENST00000556958 PCDHGA1Q9Y5H4 931 aa6.29□□□□□ -1.4
ATXN3-245ENST00000556958 C2CD3Q4AC94 2353 aa6.29□□□□□ -1.4
ATXN3-245ENST00000556958 SPAG17Q6Q759 2223 aa6.28□□□□□ -1.4
ATXN3-245ENST00000556958 TCRBV21S2A2A0A5A6 115 aa6.28□□□□□ -1.4
ATXN3-245ENST00000556958 CDC14CA4D256 554 aa6.28□□□□□ -1.4
ATXN3-245ENST00000556958 TMEM150BA6NC51 233 aa6.28□□□□□ -1.4
ATXN3-245ENST00000556958 MYMKA6NI61 221 aa6.28□□□□□ -1.4
ATXN3-245ENST00000556958 CCDC69A6NI79 296 aa6.28□□□□□ -1.4
ATXN3-245ENST00000556958 TTLL8A6PVC2 850 aa6.28□□□□□ -1.4
ATXN3-245ENST00000556958 I3L4J1 428 aa6.28□□□□□ -1.4
ATXN3-245ENST00000556958 K7EQS6 105 aa6.28□□□□□ -1.4
ATXN3-245ENST00000556958 HIP1O00291 1037 aa6.28□□□□□ -1.4
ATXN3-245ENST00000556958 TBX3O15119 743 aa6.28□□□□□ -1.4
ATXN3-245ENST00000556958 KLF8O95600 359 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-245ENST00000556958 SFTPCP11686 197 aa6.28□□□□□ -1.4
ATXN3-245ENST00000556958 MYF5P13349 255 aa6.28□□□□□ -1.4
ATXN3-245ENST00000556958 DDX6P26196 483 aaKnown RBP eCLIP6.28□□□□□ -1.4
ATXN3-245ENST00000556958 IFNAR2P48551 515 aa6.28□□□□□ -1.4
ATXN3-245ENST00000556958 INHBCP55103 352 aa6.28□□□□□ -1.4
ATXN3-245ENST00000556958 NPEPPSP55786 919 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms