RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 SRSF4Q08170 494 aaKnown RBP5.2□□□□□ -1.58
PRPF39-210ENST00000556718 ZNF543Q08ER8 600 aa5.2□□□□□ -1.58
PRPF39-210ENST00000556718 TRIM14Q14142 442 aa5.2□□□□□ -1.58
PRPF39-210ENST00000556718 C1QL2Q7Z5L3 287 aa5.2□□□□□ -1.58
PRPF39-210ENST00000556718 BRI3BPQ8WY22 251 aa5.2□□□□□ -1.58
PRPF39-210ENST00000556718 LTV1Q96GA3 475 aaPredicted RBP5.2□□□□□ -1.58
PRPF39-210ENST00000556718 BOD1Q96IK1 185 aa5.2□□□□□ -1.58
PRPF39-210ENST00000556718 AIFM2Q9BRQ8 373 aa5.2□□□□□ -1.58
PRPF39-210ENST00000556718 WDR12Q9GZL7 423 aaKnown RBP5.2□□□□□ -1.58
PRPF39-210ENST00000556718 TBCCD1Q9NVR7 557 aa5.2□□□□□ -1.58
PRPF39-210ENST00000556718 PCDHA6Q9UN73 950 aa5.2□□□□□ -1.58
PRPF39-210ENST00000556718 PAXBP1Q9Y5B6 917 aa5.2□□□□□ -1.58
PRPF39-210ENST00000556718 PCDHA1Q9Y5I3 950 aa5.2□□□□□ -1.58
PRPF39-210ENST00000556718 PROB1E7EW31 1015 aa5.19□□□□□ -1.58
PRPF39-210ENST00000556718 MYO1FO00160 1098 aa5.19□□□□□ -1.58
PRPF39-210ENST00000556718 EIF5BO60841 1220 aaKnown RBP5.19□□□□□ -1.58
PRPF39-210ENST00000556718 FGAP02671 866 aa5.19□□□□□ -1.58
PRPF39-210ENST00000556718 SNRPA1P09661 255 aaKnown RBP5.19□□□□□ -1.58
PRPF39-210ENST00000556718 TECP42680 631 aa5.19□□□□□ -1.58
PRPF39-210ENST00000556718 KCNJ5P48544 419 aa5.19□□□□□ -1.58
PRPF39-210ENST00000556718 ZNF81P51508 661 aa5.19□□□□□ -1.58
PRPF39-210ENST00000556718 SUMO3P55854 103 aaPredicted RBP5.19□□□□□ -1.58
PRPF39-210ENST00000556718 HSD11B2P80365 405 aa5.19□□□□□ -1.58
PRPF39-210ENST00000556718 FMO1Q01740 532 aa5.19□□□□□ -1.58
PRPF39-210ENST00000556718 GRM1Q13255 1194 aa5.19□□□□□ -1.58
PRPF39-210ENST00000556718 SP140Q13342 867 aa5.19□□□□□ -1.58
PRPF39-210ENST00000556718 BIRC3Q13489 604 aa5.19□□□□□ -1.58
PRPF39-210ENST00000556718 DAG1Q14118 895 aa5.19□□□□□ -1.58
PRPF39-210ENST00000556718 RALBP1Q15311 655 aa5.19□□□□□ -1.58
PRPF39-210ENST00000556718 SLC44A4Q53GD3 710 aa5.19□□□□□ -1.58
PRPF39-210ENST00000556718 ZNF572Q7Z3I7 529 aaPredicted RBP5.19□□□□□ -1.58
PRPF39-210ENST00000556718 COL23A1Q86Y22 540 aaPredicted RBP5.19□□□□□ -1.58
PRPF39-210ENST00000556718 AOPEPQ8N6M6 819 aa5.19□□□□□ -1.58
PRPF39-210ENST00000556718 C9orf106Q8NAJ2 232 aa5.19□□□□□ -1.58
PRPF39-210ENST00000556718 SPATA5Q8NB90 893 aa5.19□□□□□ -1.58
PRPF39-210ENST00000556718 OR6B3Q8NGW1 331 aa5.19□□□□□ -1.58
PRPF39-210ENST00000556718 KBTBD7Q8WVZ9 684 aa5.19□□□□□ -1.58
PRPF39-210ENST00000556718 COLEC11Q9BWP8 271 aa5.19□□□□□ -1.58
PRPF39-210ENST00000556718 C1QTNF7Q9BXJ2 289 aa5.19□□□□□ -1.58
PRPF39-210ENST00000556718 GALNT9Q9HCQ5 603 aa5.19□□□□□ -1.58
PRPF39-210ENST00000556718 SERHLQ9NQF3 203 aa5.19□□□□□ -1.58
PRPF39-210ENST00000556718 SIDT1Q9NXL6 827 aaKnown RBP5.19□□□□□ -1.58
PRPF39-210ENST00000556718 SLC17A6Q9P2U8 582 aa5.19□□□□□ -1.58
PRPF39-210ENST00000556718 AFF4Q9UHB7 1163 aaKnown RBP5.19□□□□□ -1.58
PRPF39-210ENST00000556718 MAGED2Q9UNF1 606 aaPredicted RBP5.19□□□□□ -1.58
PRPF39-210ENST00000556718 USP19O94966 1318 aa5.19□□□□□ -1.58
PRPF39-210ENST00000556718 F2RL2O00254 374 aa5.18□□□□□ -1.58
PRPF39-210ENST00000556718 APOL1O14791 398 aa5.18□□□□□ -1.58
PRPF39-210ENST00000556718 TBC1D4O60343 1298 aa5.18□□□□□ -1.58
PRPF39-210ENST00000556718 AMY1AP04745 511 aa5.18□□□□□ -1.58
PRPF39-210ENST00000556718 CD1AP06126 327 aa5.18□□□□□ -1.58
PRPF39-210ENST00000556718 RAP2AP10114 183 aa5.18□□□□□ -1.58
PRPF39-210ENST00000556718 MTHFD1P11586 935 aaKnown RBP5.18□□□□□ -1.58
PRPF39-210ENST00000556718 ALOX15P16050 662 aaPredicted RBP5.18□□□□□ -1.58
PRPF39-210ENST00000556718 NPR1P16066 1061 aa5.18□□□□□ -1.58
PRPF39-210ENST00000556718 EN2P19622 333 aaPredicted RBP5.18□□□□□ -1.58
PRPF39-210ENST00000556718 ABCB4P21439 1286 aa5.18□□□□□ -1.58
PRPF39-210ENST00000556718 SLC6A2P23975 617 aa5.18□□□□□ -1.58
PRPF39-210ENST00000556718 PRDX5P30044 214 aa5.18□□□□□ -1.58
PRPF39-210ENST00000556718 GUCY1A2P33402 732 aa5.18□□□□□ -1.58
PRPF39-210ENST00000556718 CCT5P48643 541 aa5.18□□□□□ -1.58
PRPF39-210ENST00000556718 PIK3CGP48736 1102 aa5.18□□□□□ -1.58
PRPF39-210ENST00000556718 ICA1Q05084 483 aa5.18□□□□□ -1.58
PRPF39-210ENST00000556718 POU5F1BQ06416 359 aa5.18□□□□□ -1.58
PRPF39-210ENST00000556718 MTM1Q13496 603 aa5.18□□□□□ -1.58
PRPF39-210ENST00000556718 HABP2Q14520 560 aaPredicted RBP5.18□□□□□ -1.58
PRPF39-210ENST00000556718 STARD3Q14849 445 aa5.18□□□□□ -1.58
PRPF39-210ENST00000556718 PGBD2Q6P3X8 592 aa5.18□□□□□ -1.58
PRPF39-210ENST00000556718 ZNF783Q6ZMS7 281 aa5.18□□□□□ -1.58
PRPF39-210ENST00000556718 ZNF788Q6ZQV5 615 aa5.18□□□□□ -1.58
PRPF39-210ENST00000556718 LIX1LQ8IVB5 337 aa5.18□□□□□ -1.58
PRPF39-210ENST00000556718 SYTL1Q8IYJ3 562 aa5.18□□□□□ -1.58
PRPF39-210ENST00000556718 ZGPATQ8N5A5 531 aaKnown RBP5.18□□□□□ -1.58
PRPF39-210ENST00000556718 STON2Q8WXE9 905 aa5.18□□□□□ -1.58
PRPF39-210ENST00000556718 TNPO1Q92973 898 aaKnown RBP5.18□□□□□ -1.58
PRPF39-210ENST00000556718 C11orf54Q9H0W9 315 aaPredicted RBP5.18□□□□□ -1.58
PRPF39-210ENST00000556718 MRPL46Q9H2W6 279 aaKnown RBP5.18□□□□□ -1.58
PRPF39-210ENST00000556718 RNPEPQ9H4A4 650 aa5.18□□□□□ -1.58
PRPF39-210ENST00000556718 UNKLQ9H9P5 680 aaKnown RBP5.18□□□□□ -1.58
PRPF39-210ENST00000556718 SACM1LQ9NTJ5 587 aa5.18□□□□□ -1.58
PRPF39-210ENST00000556718 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.18□□□□□ -1.58
PRPF39-210ENST00000556718 ARPP21Q9UBL0 812 aaPredicted RBP5.18□□□□□ -1.58
PRPF39-210ENST00000556718 ZDHHC8Q9ULC8 765 aa5.18□□□□□ -1.58
PRPF39-210ENST00000556718 WIPF3A6NGB9 483 aa5.17□□□□□ -1.58
PRPF39-210ENST00000556718 ADAMTS3O15072 1205 aa5.17□□□□□ -1.58
PRPF39-210ENST00000556718 NCK2O43639 380 aa5.17□□□□□ -1.58
PRPF39-210ENST00000556718 PROP1O75360 226 aa5.17□□□□□ -1.58
PRPF39-210ENST00000556718 WDHD1O75717 1129 aaPredicted RBP5.17□□□□□ -1.58
PRPF39-210ENST00000556718 ZFPL1O95159 310 aa5.17□□□□□ -1.58
PRPF39-210ENST00000556718 GNAI2P04899 355 aa5.17□□□□□ -1.58
PRPF39-210ENST00000556718 TSHRP16473 764 aa5.17□□□□□ -1.58
PRPF39-210ENST00000556718 GCSHP23434 173 aa5.17□□□□□ -1.58
PRPF39-210ENST00000556718 SOX8P57073 446 aa5.17□□□□□ -1.58
PRPF39-210ENST00000556718 ATP8B2P98198 1209 aa5.17□□□□□ -1.58
PRPF39-210ENST00000556718 ELF2Q15723 593 aa5.17□□□□□ -1.58
PRPF39-210ENST00000556718 CYP2A13Q16696 494 aa5.17□□□□□ -1.58
PRPF39-210ENST00000556718 PABPC1LQ4VXU2 614 aaKnown RBP5.17□□□□□ -1.58
PRPF39-210ENST00000556718 DACT2Q5SW24 774 aa5.17□□□□□ -1.58
PRPF39-210ENST00000556718 EMC10Q5UCC4 262 aa5.17□□□□□ -1.58
PRPF39-210ENST00000556718 AFMIDQ63HM1 303 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms