RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 MYBPHLA2RUH7 354 aa11.32□□□□□ -0.6
SPTLC2-205ENST00000556607 SHISA7A6NL88 538 aa11.32□□□□□ -0.6
SPTLC2-205ENST00000556607 ARNTLO00327 626 aa11.32□□□□□ -0.6
SPTLC2-205ENST00000556607 TGFB1I1O43294 461 aa11.32□□□□□ -0.6
SPTLC2-205ENST00000556607 ATP2C2O75185 946 aa11.32□□□□□ -0.6
SPTLC2-205ENST00000556607 CST3P01034 146 aaPredicted RBP11.32□□□□□ -0.6
SPTLC2-205ENST00000556607 HMGA1P17096 107 aaKnown RBP11.32□□□□□ -0.6
SPTLC2-205ENST00000556607 BDNFP23560 247 aa11.32□□□□□ -0.6
SPTLC2-205ENST00000556607 LMO2P25791 158 aa11.32□□□□□ -0.6
SPTLC2-205ENST00000556607 DDX6P26196 483 aaKnown RBP eCLIP11.32□□□□□ -0.6
SPTLC2-205ENST00000556607 ANXA13P27216 316 aa11.32□□□□□ -0.6
SPTLC2-205ENST00000556607 HOXD13P35453 343 aa11.32□□□□□ -0.6
SPTLC2-205ENST00000556607 ID4P47928 161 aa11.32□□□□□ -0.6
SPTLC2-205ENST00000556607 CXCL12P48061 93 aa11.32□□□□□ -0.6
SPTLC2-205ENST00000556607 NRLP54845 237 aa11.32□□□□□ -0.6
SPTLC2-205ENST00000556607 PLCB2Q00722 1185 aa11.32□□□□□ -0.6
SPTLC2-205ENST00000556607 MAPRE1Q15691 268 aaKnown RBP11.32□□□□□ -0.6
SPTLC2-205ENST00000556607 CCDC142Q17RM4 750 aa11.32□□□□□ -0.6
SPTLC2-205ENST00000556607 ITPRIPL2Q3MIP1 535 aa11.32□□□□□ -0.6
SPTLC2-205ENST00000556607 CNNM4Q6P4Q7 775 aa11.32□□□□□ -0.6
SPTLC2-205ENST00000556607 EPM2AIP1Q7L775 607 aaPredicted RBP11.32□□□□□ -0.6
SPTLC2-205ENST00000556607 RALGPS2Q86X27 583 aaPredicted RBP11.32□□□□□ -0.6
SPTLC2-205ENST00000556607 CXorf38Q8TB03 319 aa11.32□□□□□ -0.6
SPTLC2-205ENST00000556607 SPATA18Q8TC71 538 aa11.32□□□□□ -0.6
SPTLC2-205ENST00000556607 SCFD1Q8WVM8 642 aa11.32□□□□□ -0.6
SPTLC2-205ENST00000556607 RUBCNQ92622 972 aa11.32□□□□□ -0.6
SPTLC2-205ENST00000556607 SECISBP2LQ93073 1101 aaKnown RBP11.32□□□□□ -0.6
SPTLC2-205ENST00000556607 SPATA32Q96LK8 384 aa11.32□□□□□ -0.6
SPTLC2-205ENST00000556607 LRRC3BQ96PB8 259 aa11.32□□□□□ -0.6
SPTLC2-205ENST00000556607 CGRRF1Q99675 332 aa11.32□□□□□ -0.6
SPTLC2-205ENST00000556607 ABCB6Q9NP58 842 aa11.32□□□□□ -0.6
SPTLC2-205ENST00000556607 TDP1Q9NUW8 608 aa11.32□□□□□ -0.6
SPTLC2-205ENST00000556607 ZMYM5Q9UJ78 669 aa11.32□□□□□ -0.6
SPTLC2-205ENST00000556607 CDH9Q9ULB4 789 aa11.32□□□□□ -0.6
SPTLC2-205ENST00000556607 GREB1Q4ZG55 1949 aa11.31□□□□□ -0.6
SPTLC2-205ENST00000556607 CACNA1IQ9P0X4 2223 aa11.31□□□□□ -0.6
SPTLC2-205ENST00000556607 A0A1B0GVL5 298 aa11.31□□□□□ -0.6
SPTLC2-205ENST00000556607 GABRDO14764 452 aa11.31□□□□□ -0.6
SPTLC2-205ENST00000556607 ABL1P00519 1130 aa11.31□□□□□ -0.6
SPTLC2-205ENST00000556607 CKMP06732 381 aa11.31□□□□□ -0.6
SPTLC2-205ENST00000556607 CHRNB1P11230 501 aa11.31□□□□□ -0.6
SPTLC2-205ENST00000556607 CTHP32929 405 aa11.31□□□□□ -0.6
SPTLC2-205ENST00000556607 GNL1P36915 607 aaPredicted RBP11.31□□□□□ -0.6
SPTLC2-205ENST00000556607 MLLT6P55198 1093 aaPredicted RBP11.31□□□□□ -0.6
SPTLC2-205ENST00000556607 SNRPFP62306 86 aaKnown RBP11.31□□□□□ -0.6
SPTLC2-205ENST00000556607 CYP24A1Q07973 514 aa11.31□□□□□ -0.6
SPTLC2-205ENST00000556607 IFRD2Q12894 506 aaPredicted RBP11.31□□□□□ -0.6
SPTLC2-205ENST00000556607 BIRC3Q13489 604 aa11.31□□□□□ -0.6
SPTLC2-205ENST00000556607 RUNX3Q13761 415 aa11.31□□□□□ -0.6
SPTLC2-205ENST00000556607 PSMD6Q15008 389 aa11.31□□□□□ -0.6
SPTLC2-205ENST00000556607 KNOP1Q1ED39 458 aaKnown RBP11.31□□□□□ -0.6
SPTLC2-205ENST00000556607 WDR72Q3MJ13 1102 aa11.31□□□□□ -0.6
SPTLC2-205ENST00000556607 DGKKQ5KSL6 1271 aa11.31□□□□□ -0.6
SPTLC2-205ENST00000556607 TRIM68Q6AZZ1 485 aa11.31□□□□□ -0.6
SPTLC2-205ENST00000556607 TXNDC11Q6PKC3 985 aa11.31□□□□□ -0.6
SPTLC2-205ENST00000556607 KBTBD7Q8WVZ9 684 aa11.31□□□□□ -0.6
SPTLC2-205ENST00000556607 MYLPFQ96A32 169 aa11.31□□□□□ -0.6
SPTLC2-205ENST00000556607 FUBP3Q96I24 572 aaKnown RBP eCLIP11.31□□□□□ -0.6
SPTLC2-205ENST00000556607 IER2Q9BTL4 223 aa11.31□□□□□ -0.6
SPTLC2-205ENST00000556607 EBF3Q9H4W6 596 aa11.31□□□□□ -0.6
SPTLC2-205ENST00000556607 PRMT8Q9NR22 394 aaPredicted RBP11.31□□□□□ -0.6
SPTLC2-205ENST00000556607 CGNQ9P2M7 1197 aaKnown RBP11.31□□□□□ -0.6
SPTLC2-205ENST00000556607 NXF1Q9UBU9 619 aaKnown RBP11.31□□□□□ -0.6
SPTLC2-205ENST00000556607 RCOR1Q9UKL0 485 aa11.31□□□□□ -0.6
SPTLC2-205ENST00000556607 RAB23Q9ULC3 237 aa11.31□□□□□ -0.6
SPTLC2-205ENST00000556607 CCL26Q9Y258 94 aa11.31□□□□□ -0.6
SPTLC2-205ENST00000556607 ANAPC1Q9H1A4 1944 aa11.31□□□□□ -0.6
SPTLC2-205ENST00000556607 TRAV19A0A0A6YYK7 116 aa11.3□□□□□ -0.6
SPTLC2-205ENST00000556607 A8MXQ7 604 aa11.3□□□□□ -0.6
SPTLC2-205ENST00000556607 USP17L7P0C7H9 530 aa11.3□□□□□ -0.6
SPTLC2-205ENST00000556607 SLFN14P0C7P3 912 aa11.3□□□□□ -0.6
SPTLC2-205ENST00000556607 PFKFB1P16118 471 aa11.3□□□□□ -0.6
SPTLC2-205ENST00000556607 WARSP23381 471 aaKnown RBP11.3□□□□□ -0.6
SPTLC2-205ENST00000556607 WEE1P30291 646 aa11.3□□□□□ -0.6
SPTLC2-205ENST00000556607 KRT85P78386 507 aa11.3□□□□□ -0.6
SPTLC2-205ENST00000556607 SATB1Q01826 763 aa11.3□□□□□ -0.6
SPTLC2-205ENST00000556607 KCNB1Q14721 858 aa11.3□□□□□ -0.6
SPTLC2-205ENST00000556607 LPAL2Q16609 132 aa11.3□□□□□ -0.6
SPTLC2-205ENST00000556607 KMT5BQ4FZB7 885 aa11.3□□□□□ -0.6
SPTLC2-205ENST00000556607 CFAP221Q4G0U5 840 aa11.3□□□□□ -0.6
SPTLC2-205ENST00000556607 MDH1BQ5I0G3 518 aa11.3□□□□□ -0.6
SPTLC2-205ENST00000556607 HEATR6Q6AI08 1181 aaKnown RBP11.3□□□□□ -0.6
SPTLC2-205ENST00000556607 FAM171BQ6P995 826 aa11.3□□□□□ -0.6
SPTLC2-205ENST00000556607 PRR23BQ6ZRT6 265 aa11.3□□□□□ -0.6
SPTLC2-205ENST00000556607 TMEM150AQ86TG1 271 aa11.3□□□□□ -0.6
SPTLC2-205ENST00000556607 MON1AQ86VX9 555 aa11.3□□□□□ -0.6
SPTLC2-205ENST00000556607 ARL14EPQ8N8R7 260 aaPredicted RBP11.3□□□□□ -0.6
SPTLC2-205ENST00000556607 USP13Q92995 863 aaPredicted RBP11.3□□□□□ -0.6
SPTLC2-205ENST00000556607 CCDC47Q96A33 483 aaKnown RBP11.3□□□□□ -0.6
SPTLC2-205ENST00000556607 SYAP1Q96A49 352 aaPredicted RBP11.3□□□□□ -0.6
SPTLC2-205ENST00000556607 PAGE5Q96GU1 130 aa11.3□□□□□ -0.6
SPTLC2-205ENST00000556607 CYP2S1Q96SQ9 504 aa11.3□□□□□ -0.6
SPTLC2-205ENST00000556607 MRPL45Q9BRJ2 306 aaKnown RBP11.3□□□□□ -0.6
SPTLC2-205ENST00000556607 FAM126AQ9BYI3 521 aaPredicted RBP11.3□□□□□ -0.6
SPTLC2-205ENST00000556607 KIF9Q9HAQ2 790 aa11.3□□□□□ -0.6
SPTLC2-205ENST00000556607 GMEB2Q9UKD1 530 aa11.3□□□□□ -0.6
SPTLC2-205ENST00000556607 GTF3C3Q9Y5Q9 886 aa11.3□□□□□ -0.6
SPTLC2-205ENST00000556607 MYO15AQ9UKN7 3530 aa11.3□□□□□ -0.6
SPTLC2-205ENST00000556607 HELZP42694 1942 aaKnown RBP11.3□□□□□ -0.6
SPTLC2-205ENST00000556607 PTPRDP23468 1912 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms