RNA–Protein interactions for RNA: ENST00000555953.1

SCFD1-217, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-217ENST00000555953 TBC1D30Q9Y2I9 924 aa5.19□□□□□ -1.58
SCFD1-217ENST00000555953 ALG1L2C9J202 215 aa5.18□□□□□ -1.58
SCFD1-217ENST00000555953 IKBKBO14920 756 aa5.18□□□□□ -1.58
SCFD1-217ENST00000555953 KCNAB3O43448 404 aa5.18□□□□□ -1.58
SCFD1-217ENST00000555953 ONECUT2O95948 504 aa5.18□□□□□ -1.58
SCFD1-217ENST00000555953 ATXN1LP0C7T5 689 aaKnown RBP5.18□□□□□ -1.58
SCFD1-217ENST00000555953 HDCP19113 662 aa5.18□□□□□ -1.58
SCFD1-217ENST00000555953 PPIFP30405 207 aaKnown RBP5.18□□□□□ -1.58
SCFD1-217ENST00000555953 RECQLP46063 649 aaPredicted RBP5.18□□□□□ -1.58
SCFD1-217ENST00000555953 LOXL3P58215 753 aa5.18□□□□□ -1.58
SCFD1-217ENST00000555953 LAYNQ6UX15 382 aa5.18□□□□□ -1.58
SCFD1-217ENST00000555953 CATSPERGQ6ZRH7 1159 aa5.18□□□□□ -1.58
SCFD1-217ENST00000555953 LRRC71Q8N4P6 559 aa5.18□□□□□ -1.58
SCFD1-217ENST00000555953 PNLDC1Q8NA58 520 aaKnown RBP5.18□□□□□ -1.58
SCFD1-217ENST00000555953 FAM167AQ96KS9 214 aa5.18□□□□□ -1.58
SCFD1-217ENST00000555953 CAMKK2Q96RR4 588 aa5.18□□□□□ -1.58
SCFD1-217ENST00000555953 PTDSS2Q9BVG9 487 aa5.18□□□□□ -1.58
SCFD1-217ENST00000555953 KRTAP1-5Q9BYS1 174 aa5.18□□□□□ -1.58
SCFD1-217ENST00000555953 ASPSCR1Q9BZE9 553 aa5.18□□□□□ -1.58
SCFD1-217ENST00000555953 SPRTNQ9H040 489 aaPredicted RBP5.18□□□□□ -1.58
SCFD1-217ENST00000555953 ADAMTS5Q9UNA0 930 aa5.18□□□□□ -1.58
SCFD1-217ENST00000555953 WASHC2CQ9Y4E1 1318 aa5.18□□□□□ -1.58
SCFD1-217ENST00000555953 SMIM35A0A1B0GVV1 85 aa5.17□□□□□ -1.58
SCFD1-217ENST00000555953 UNC5CO95185 931 aa5.17□□□□□ -1.58
SCFD1-217ENST00000555953 POU2F2P09086 479 aa5.17□□□□□ -1.58
SCFD1-217ENST00000555953 PXNP49023 591 aaPredicted RBP5.17□□□□□ -1.58
SCFD1-217ENST00000555953 PDE1AP54750 535 aa5.17□□□□□ -1.58
SCFD1-217ENST00000555953 HOXA4Q00056 320 aaPredicted RBP5.17□□□□□ -1.58
SCFD1-217ENST00000555953 PLS1Q14651 629 aa5.17□□□□□ -1.58
SCFD1-217ENST00000555953 EMC10Q5UCC4 262 aa5.17□□□□□ -1.58
SCFD1-217ENST00000555953 RGS7BPQ6MZT1 257 aaPredicted RBP5.17□□□□□ -1.58
SCFD1-217ENST00000555953 CATIPQ7Z7H3 387 aa5.17□□□□□ -1.58
SCFD1-217ENST00000555953 CYP2W1Q8TAV3 490 aa5.17□□□□□ -1.58
SCFD1-217ENST00000555953 GLG1Q92896 1179 aa5.17□□□□□ -1.58
SCFD1-217ENST00000555953 R3HDM4Q96D70 268 aa5.17□□□□□ -1.58
SCFD1-217ENST00000555953 C5orf34Q96MH7 638 aa5.17□□□□□ -1.58
SCFD1-217ENST00000555953 PRSS22Q9GZN4 317 aa5.17□□□□□ -1.58
SCFD1-217ENST00000555953 GLOD4Q9HC38 313 aa5.17□□□□□ -1.58
SCFD1-217ENST00000555953 SBNO2Q9Y2G9 1366 aa5.16□□□□□ -1.58
SCFD1-217ENST00000555953 A1L4Q6 167 aa5.16□□□□□ -1.58
SCFD1-217ENST00000555953 KCNU1A8MYU2 1149 aa5.16□□□□□ -1.58
SCFD1-217ENST00000555953 PPEF2O14830 753 aa5.16□□□□□ -1.58
SCFD1-217ENST00000555953 ERC2O15083 957 aa5.16□□□□□ -1.58
SCFD1-217ENST00000555953 NPSP0C0P6 89 aa5.16□□□□□ -1.58
SCFD1-217ENST00000555953 ARHGAP25P42331 645 aa5.16□□□□□ -1.58
SCFD1-217ENST00000555953 NKX6-1P78426 367 aaPredicted RBP5.16□□□□□ -1.58
SCFD1-217ENST00000555953 IQCB1Q15051 598 aa5.16□□□□□ -1.58
SCFD1-217ENST00000555953 TRIM72Q6ZMU5 477 aa5.16□□□□□ -1.58
SCFD1-217ENST00000555953 PARS2Q7L3T8 475 aaKnown RBP5.16□□□□□ -1.58
SCFD1-217ENST00000555953 GALNT16Q8N428 558 aa5.16□□□□□ -1.58
SCFD1-217ENST00000555953 CELF5Q8N6W0 485 aaKnown RBP5.16□□□□□ -1.58
SCFD1-217ENST00000555953 C8orf58Q8NAV2 365 aa5.16□□□□□ -1.58
SCFD1-217ENST00000555953 RP9Q8TA86 221 aaKnown RBP5.16□□□□□ -1.58
SCFD1-217ENST00000555953 BRIX1Q8TDN6 353 aaKnown RBP5.16□□□□□ -1.58
SCFD1-217ENST00000555953 ASB2Q96Q27 587 aa5.16□□□□□ -1.58
SCFD1-217ENST00000555953 PDGFCQ9NRA1 345 aa5.16□□□□□ -1.58
SCFD1-217ENST00000555953 ELOVL5Q9NYP7 299 aa5.16□□□□□ -1.58
SCFD1-217ENST00000555953 H3BUI4 141 aa5.15□□□□□ -1.59
SCFD1-217ENST00000555953 SNUPNO95149 360 aaKnown RBP5.15□□□□□ -1.59
SCFD1-217ENST00000555953 SOX8P57073 446 aa5.15□□□□□ -1.59
SCFD1-217ENST00000555953 PGS1Q32NB8 556 aa5.15□□□□□ -1.59
SCFD1-217ENST00000555953 FCRL6Q6DN72 434 aa5.15□□□□□ -1.59
SCFD1-217ENST00000555953 Q6ZWC4 215 aa5.15□□□□□ -1.59
SCFD1-217ENST00000555953 TECPR1Q7Z6L1 1165 aa5.15□□□□□ -1.59
SCFD1-217ENST00000555953 RITA1Q96K30 269 aa5.15□□□□□ -1.59
SCFD1-217ENST00000555953 GTPBP4Q9BZE4 634 aaKnown RBP5.15□□□□□ -1.59
SCFD1-217ENST00000555953 VPS16Q9H269 839 aa5.15□□□□□ -1.59
SCFD1-217ENST00000555953 ANLNQ9NQW6 1124 aa5.15□□□□□ -1.59
SCFD1-217ENST00000555953 NDRG4Q9ULP0 352 aaKnown RBP5.15□□□□□ -1.59
SCFD1-217ENST00000555953 SPEF1Q9Y4P9 236 aa5.15□□□□□ -1.59
SCFD1-217ENST00000555953 CYP2D7A0A087X1C5 515 aa5.14□□□□□ -1.59
SCFD1-217ENST00000555953 TRIM38O00635 465 aa5.14□□□□□ -1.59
SCFD1-217ENST00000555953 TJP3O95049 919 aa5.14□□□□□ -1.59
SCFD1-217ENST00000555953 PDE8BO95263 885 aa5.14□□□□□ -1.59
SCFD1-217ENST00000555953 GRPP07492 148 aa5.14□□□□□ -1.59
SCFD1-217ENST00000555953 MMP13P45452 471 aa5.14□□□□□ -1.59
SCFD1-217ENST00000555953 DAZAP2Q15038 168 aaPredicted RBP5.14□□□□□ -1.59
SCFD1-217ENST00000555953 TMEM240Q5SV17 173 aa5.14□□□□□ -1.59
SCFD1-217ENST00000555953 AWAT2Q6E213 333 aa5.14□□□□□ -1.59
SCFD1-217ENST00000555953 KIRREL2Q6UWL6 708 aa5.14□□□□□ -1.59
SCFD1-217ENST00000555953 CNGA4Q8IV77 575 aa5.14□□□□□ -1.59
SCFD1-217ENST00000555953 XAGE5Q8WWM1 108 aa5.14□□□□□ -1.59
SCFD1-217ENST00000555953 SLC35A4Q96G79 324 aa5.14□□□□□ -1.59
SCFD1-217ENST00000555953 THAP7Q9BT49 309 aaPredicted RBP5.14□□□□□ -1.59
SCFD1-217ENST00000555953 PCDHA6Q9UN73 950 aa5.14□□□□□ -1.59
SCFD1-217ENST00000555953 PLEKHM1Q9Y4G2 1056 aa5.14□□□□□ -1.59
SCFD1-217ENST00000555953 hCG_1984214I3L0E3 225 aa5.13□□□□□ -1.59
SCFD1-217ENST00000555953 NTN1O95631 604 aa5.13□□□□□ -1.59
SCFD1-217ENST00000555953 IL33O95760 270 aa5.13□□□□□ -1.59
SCFD1-217ENST00000555953 VIPR2P41587 438 aa5.13□□□□□ -1.59
SCFD1-217ENST00000555953 CCT4P50991 539 aaKnown RBP5.13□□□□□ -1.59
SCFD1-217ENST00000555953 TPTEP56180 551 aa5.13□□□□□ -1.59
SCFD1-217ENST00000555953 E2F2Q14209 437 aa5.13□□□□□ -1.59
SCFD1-217ENST00000555953 AMOTQ4VCS5 1084 aa5.13□□□□□ -1.59
SCFD1-217ENST00000555953 CCDC157Q569K6 752 aa5.13□□□□□ -1.59
SCFD1-217ENST00000555953 DAZAP1Q96EP5 407 aaKnown RBP5.13□□□□□ -1.59
SCFD1-217ENST00000555953 MVB12AQ96EY5 273 aa5.13□□□□□ -1.59
SCFD1-217ENST00000555953 TUBA8Q9NY65 449 aaPredicted RBP5.13□□□□□ -1.59
SCFD1-217ENST00000555953 CCNL1Q9UK58 526 aaPredicted RBP5.13□□□□□ -1.59
SCFD1-217ENST00000555953 GABRQQ9UN88 632 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms