RNA–Protein interactions for RNA: ENST00000555907.5

RAD51B-222, Transcript of RAD51 paralog B, human

TSL 5

Gene RAD51B, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD51B-222	ENST00000555907	DNAI2	Q9GZS0	605 aa		12.05	□□□□□ -0.48
RAD51B-222	ENST00000555907	SMOC2	Q9H3U7	446 aa		12.05	□□□□□ -0.48
RAD51B-222	ENST00000555907	SMYD3	Q9H7B4	428 aa		12.05	□□□□□ -0.48
RAD51B-222	ENST00000555907	MARCH5	Q9NX47	278 aa		12.05	□□□□□ -0.48
RAD51B-222	ENST00000555907	CACNG4	Q9UBN1	327 aa		12.05	□□□□□ -0.48
RAD51B-222	ENST00000555907	PCDHB4	Q9Y5E5	795 aa		12.05	□□□□□ -0.48
RAD51B-222	ENST00000555907	MYO10	Q9HD67	2058 aa		12.04	□□□□□ -0.48
RAD51B-222	ENST00000555907	SSU72P8	A0A1W2PR75	194 aa		12.04	□□□□□ -0.48
RAD51B-222	ENST00000555907	CYP26A1	O43174	497 aa		12.04	□□□□□ -0.48
RAD51B-222	ENST00000555907	GFPT2	O94808	682 aa		12.04	□□□□□ -0.48
RAD51B-222	ENST00000555907	CXCL14	O95715	111 aa		12.04	□□□□□ -0.48
RAD51B-222	ENST00000555907	SRGAP2B	P0DMP2	458 aa		12.04	□□□□□ -0.48
RAD51B-222	ENST00000555907	ODC1	P11926	461 aa		12.04	□□□□□ -0.48
RAD51B-222	ENST00000555907	CA8	P35219	290 aa		12.04	□□□□□ -0.48
RAD51B-222	ENST00000555907	BRCC3	P46736	316 aa		12.04	□□□□□ -0.48
RAD51B-222	ENST00000555907	RAD23B	P54727	409 aa		12.04	□□□□□ -0.48
RAD51B-222	ENST00000555907	PTK2	Q05397	1052 aa		12.04	□□□□□ -0.48
RAD51B-222	ENST00000555907	MRPL58	Q14197	206 aa	Known RBP	12.04	□□□□□ -0.48
RAD51B-222	ENST00000555907	BMS1	Q14692	1282 aa	Known RBP	12.04	□□□□□ -0.48
RAD51B-222	ENST00000555907	ASIC2	Q16515	512 aa		12.04	□□□□□ -0.48
RAD51B-222	ENST00000555907	WSCD1	Q658N2	575 aa		12.04	□□□□□ -0.48
RAD51B-222	ENST00000555907	E4F1	Q66K89	784 aa	Predicted RBP	12.04	□□□□□ -0.48
RAD51B-222	ENST00000555907	TMEM270	Q6UE05	265 aa		12.04	□□□□□ -0.48
RAD51B-222	ENST00000555907	METTL23	Q86XA0	190 aa		12.04	□□□□□ -0.48
RAD51B-222	ENST00000555907	ZNF677	Q86XU0	584 aa		12.04	□□□□□ -0.48
RAD51B-222	ENST00000555907	VPS52	Q8N1B4	723 aa		12.04	□□□□□ -0.48
RAD51B-222	ENST00000555907	MRPL43	Q8N983	215 aa	Known RBP	12.04	□□□□□ -0.48
RAD51B-222	ENST00000555907	RABGGTA	Q92696	567 aa		12.04	□□□□□ -0.48
RAD51B-222	ENST00000555907	TMEM176A	Q96HP8	235 aa		12.04	□□□□□ -0.48
RAD51B-222	ENST00000555907	SYT11	Q9BT88	431 aa		12.04	□□□□□ -0.48
RAD51B-222	ENST00000555907	NT5C1A	Q9BXI3	368 aa		12.04	□□□□□ -0.48
RAD51B-222	ENST00000555907	OXCT2	Q9BYC2	517 aa	Predicted RBP	12.04	□□□□□ -0.48
RAD51B-222	ENST00000555907	PRG3	Q9Y2Y8	225 aa	Predicted RBP	12.04	□□□□□ -0.48
RAD51B-222	ENST00000555907	SF3B1	O75533	1304 aa	Known RBP eCLIP	12.04	□□□□□ -0.48
RAD51B-222	ENST00000555907	USP34	Q70CQ2	3546 aa		12.03	□□□□□ -0.48
RAD51B-222	ENST00000555907	C2orf71	A6NGG8	1288 aa		12.03	□□□□□ -0.48
RAD51B-222	ENST00000555907		F8W810	466 aa		12.03	□□□□□ -0.48
RAD51B-222	ENST00000555907	PTMA	P06454	111 aa	Known RBP	12.03	□□□□□ -0.48
RAD51B-222	ENST00000555907	KRT5	P13647	590 aa		12.03	□□□□□ -0.48
RAD51B-222	ENST00000555907	NDST1	P52848	882 aa		12.03	□□□□□ -0.48
RAD51B-222	ENST00000555907	GOLGA8F	Q08AF8	430 aa		12.03	□□□□□ -0.48
RAD51B-222	ENST00000555907	GOLGA8DP	Q0D2H9	430 aa		12.03	□□□□□ -0.48
RAD51B-222	ENST00000555907	KLHL30	Q0D2K2	578 aa		12.03	□□□□□ -0.48
RAD51B-222	ENST00000555907	KCNC3	Q14003	757 aa		12.03	□□□□□ -0.48
RAD51B-222	ENST00000555907	ASTE1	Q2TB18	679 aa	Predicted RBP	12.03	□□□□□ -0.48
RAD51B-222	ENST00000555907	FUT10	Q6P4F1	479 aa		12.03	□□□□□ -0.48
RAD51B-222	ENST00000555907	CYP26C1	Q6V0L0	522 aa		12.03	□□□□□ -0.48
RAD51B-222	ENST00000555907	TMEM184A	Q6ZMB5	413 aa		12.03	□□□□□ -0.48
RAD51B-222	ENST00000555907	SCARA5	Q6ZMJ2	495 aa		12.03	□□□□□ -0.48
RAD51B-222	ENST00000555907	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	12.03	□□□□□ -0.48
RAD51B-222	ENST00000555907	DDX53	Q86TM3	631 aa	Known RBP	12.03	□□□□□ -0.48
RAD51B-222	ENST00000555907	TMEM139	Q8IV31	216 aa		12.03	□□□□□ -0.48
RAD51B-222	ENST00000555907	CCDC170	Q8IYT3	715 aa		12.03	□□□□□ -0.48
RAD51B-222	ENST00000555907	ADGRF2	Q8IZF7	708 aa		12.03	□□□□□ -0.48
RAD51B-222	ENST00000555907	SLC4A11	Q8NBS3	891 aa		12.03	□□□□□ -0.48
RAD51B-222	ENST00000555907	RBBP8NL	Q8NC74	664 aa	Predicted RBP	12.03	□□□□□ -0.48
RAD51B-222	ENST00000555907	KREMEN2	Q8NCW0	462 aa		12.03	□□□□□ -0.48
RAD51B-222	ENST00000555907	BCL7C	Q8WUZ0	217 aa	Predicted RBP	12.03	□□□□□ -0.48
RAD51B-222	ENST00000555907	AUTS2	Q8WXX7	1259 aa		12.03	□□□□□ -0.48
RAD51B-222	ENST00000555907	DDX1	Q92499	740 aa	Known RBP	12.03	□□□□□ -0.48
RAD51B-222	ENST00000555907	RIPOR3	Q96MK2	946 aa		12.03	□□□□□ -0.48
RAD51B-222	ENST00000555907	BAG1	Q99933	345 aa	Predicted RBP	12.03	□□□□□ -0.48
RAD51B-222	ENST00000555907	ACBD6	Q9BR61	282 aa		12.03	□□□□□ -0.48
RAD51B-222	ENST00000555907	GPR62	Q9BZJ7	368 aa		12.03	□□□□□ -0.48
RAD51B-222	ENST00000555907	ELOVL4	Q9GZR5	314 aa		12.03	□□□□□ -0.48
RAD51B-222	ENST00000555907	ZBP1	Q9H171	429 aa		12.03	□□□□□ -0.48
RAD51B-222	ENST00000555907	SNX25	Q9H3E2	840 aa		12.03	□□□□□ -0.48
RAD51B-222	ENST00000555907	CHST7	Q9NS84	486 aa		12.03	□□□□□ -0.48
RAD51B-222	ENST00000555907	NOCT	Q9UK39	431 aa	Known RBP	12.03	□□□□□ -0.48
RAD51B-222	ENST00000555907	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	12.02	□□□□□ -0.49
RAD51B-222	ENST00000555907	GALR2	O43603	387 aa	Predicted RBP	12.02	□□□□□ -0.49
RAD51B-222	ENST00000555907	NRDC	O43847	1150 aa		12.02	□□□□□ -0.49
RAD51B-222	ENST00000555907	TBC1D4	O60343	1298 aa		12.02	□□□□□ -0.49
RAD51B-222	ENST00000555907	CLASP2	O75122	1294 aa	Known RBP	12.02	□□□□□ -0.49
RAD51B-222	ENST00000555907	VDR	P11473	427 aa		12.02	□□□□□ -0.49
RAD51B-222	ENST00000555907	CYP11B1	P15538	503 aa		12.02	□□□□□ -0.49
RAD51B-222	ENST00000555907	CD58	P19256	250 aa		12.02	□□□□□ -0.49
RAD51B-222	ENST00000555907	PCSK1	P29120	753 aa		12.02	□□□□□ -0.49
RAD51B-222	ENST00000555907	USP8	P40818	1118 aa		12.02	□□□□□ -0.49
RAD51B-222	ENST00000555907	RAP1GAP	P47736	663 aa		12.02	□□□□□ -0.49
RAD51B-222	ENST00000555907	CDR2	Q01850	454 aa		12.02	□□□□□ -0.49
RAD51B-222	ENST00000555907	CNGA2	Q16280	664 aa		12.02	□□□□□ -0.49
RAD51B-222	ENST00000555907	USP41	Q3LFD5	358 aa		12.02	□□□□□ -0.49
RAD51B-222	ENST00000555907	FAM171A1	Q5VUB5	890 aa		12.02	□□□□□ -0.49
RAD51B-222	ENST00000555907	ANKRD54	Q6NXT1	300 aa		12.02	□□□□□ -0.49
RAD51B-222	ENST00000555907	OSTM1	Q86WC4	334 aa		12.02	□□□□□ -0.49
RAD51B-222	ENST00000555907	THEM5	Q8N1Q8	247 aa		12.02	□□□□□ -0.49
RAD51B-222	ENST00000555907	OR6B3	Q8NGW1	331 aa		12.02	□□□□□ -0.49
RAD51B-222	ENST00000555907	ZNF606	Q8WXB4	792 aa		12.02	□□□□□ -0.49
RAD51B-222	ENST00000555907	SUSD6	Q92537	303 aa		12.02	□□□□□ -0.49
RAD51B-222	ENST00000555907	TNIP3	Q96KP6	325 aa		12.02	□□□□□ -0.49
RAD51B-222	ENST00000555907	CHP1	Q99653	195 aa		12.02	□□□□□ -0.49
RAD51B-222	ENST00000555907	AGPAT1	Q99943	283 aa		12.02	□□□□□ -0.49
RAD51B-222	ENST00000555907	HAUS4	Q9H6D7	363 aa		12.02	□□□□□ -0.49
RAD51B-222	ENST00000555907	ARHGAP20	Q9P2F6	1191 aa		12.02	□□□□□ -0.49
RAD51B-222	ENST00000555907	CDH9	Q9ULB4	789 aa		12.02	□□□□□ -0.49
RAD51B-222	ENST00000555907	NME7	Q9Y5B8	376 aa		12.02	□□□□□ -0.49
RAD51B-222	ENST00000555907	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	12.02	□□□□□ -0.49
RAD51B-222	ENST00000555907	PRR23A	A6NEV1	266 aa		12.01	□□□□□ -0.49
RAD51B-222	ENST00000555907		A8MXQ7	604 aa		12.01	□□□□□ -0.49

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