RNA–Protein interactions for RNA: ENST00000555740.5

PCNX4-210, Transcript of pecanex 4, humanhuman

TSL 2

Gene PCNX4, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-210ENST00000555740 PLXNA3P51805 1871 aa8.29□□□□□ -1.08
PCNX4-210ENST00000555740 CASTOR2A6NHX0 329 aa8.29□□□□□ -1.08
PCNX4-210ENST00000555740 BTNL10A8MVZ5 291 aa8.29□□□□□ -1.08
PCNX4-210ENST00000555740 CYP26A1O43174 497 aa8.29□□□□□ -1.08
PCNX4-210ENST00000555740 LSM8O95777 96 aaKnown RBP8.29□□□□□ -1.08
PCNX4-210ENST00000555740 DEFB103AP81534 67 aa8.29□□□□□ -1.08
PCNX4-210ENST00000555740 FMO1Q01740 532 aa8.29□□□□□ -1.08
PCNX4-210ENST00000555740 TCEAL1Q15170 157 aa8.29□□□□□ -1.08
PCNX4-210ENST00000555740 STILQ15468 1287 aa8.29□□□□□ -1.08
PCNX4-210ENST00000555740 COL13A1Q5TAT6 717 aaPredicted RBP8.29□□□□□ -1.08
PCNX4-210ENST00000555740 ARHGAP17Q68EM7 881 aa8.29□□□□□ -1.08
PCNX4-210ENST00000555740 TOGARAM2Q6ZUX3 1019 aa8.29□□□□□ -1.08
PCNX4-210ENST00000555740 ADGRF2Q8IZF7 708 aa8.29□□□□□ -1.08
PCNX4-210ENST00000555740 SLC4A11Q8NBS3 891 aa8.29□□□□□ -1.08
PCNX4-210ENST00000555740 ZNF830Q96NB3 372 aaPredicted RBP8.29□□□□□ -1.08
PCNX4-210ENST00000555740 DNAI2Q9GZS0 605 aa8.29□□□□□ -1.08
PCNX4-210ENST00000555740 CWH43Q9H720 699 aa8.29□□□□□ -1.08
PCNX4-210ENST00000555740 SPTLC3Q9NUV7 552 aa8.29□□□□□ -1.08
PCNX4-210ENST00000555740 NXF1Q9UBU9 619 aaKnown RBP8.29□□□□□ -1.08
PCNX4-210ENST00000555740 NME7Q9Y5B8 376 aa8.29□□□□□ -1.08
PCNX4-210ENST00000555740 SNX9Q9Y5X1 595 aa8.29□□□□□ -1.08
PCNX4-210ENST00000555740 EPN1Q9Y6I3 576 aaPredicted RBP8.29□□□□□ -1.08
PCNX4-210ENST00000555740 NCANO14594 1321 aa8.28□□□□□ -1.08
PCNX4-210ENST00000555740 PLXNA4Q9HCM2 1894 aa8.28□□□□□ -1.08
PCNX4-210ENST00000555740 DDX3XO00571 662 aaKnown RBP eCLIP8.28□□□□□ -1.08
PCNX4-210ENST00000555740 ZNF263O14978 683 aa8.28□□□□□ -1.08
PCNX4-210ENST00000555740 SYN3O14994 580 aa8.28□□□□□ -1.08
PCNX4-210ENST00000555740 PJA2O43164 708 aa8.28□□□□□ -1.08
PCNX4-210ENST00000555740 CYP1A1P04798 512 aaPredicted RBP8.28□□□□□ -1.08
PCNX4-210ENST00000555740 RAP1GAPP47736 663 aa8.28□□□□□ -1.08
PCNX4-210ENST00000555740 GATMP50440 423 aa8.28□□□□□ -1.08
PCNX4-210ENST00000555740 EPHB4P54760 987 aa8.28□□□□□ -1.08
PCNX4-210ENST00000555740 MTF1Q14872 753 aa8.28□□□□□ -1.08
PCNX4-210ENST00000555740 TDRD12Q587J7 1177 aaKnown RBP8.28□□□□□ -1.08
PCNX4-210ENST00000555740 TMEM270Q6UE05 265 aa8.28□□□□□ -1.08
PCNX4-210ENST00000555740 SLC47A2Q86VL8 602 aa8.28□□□□□ -1.08
PCNX4-210ENST00000555740 OSTM1Q86WC4 334 aa8.28□□□□□ -1.08
PCNX4-210ENST00000555740 ZNF280BQ86YH2 543 aa8.28□□□□□ -1.08
PCNX4-210ENST00000555740 CRYBG2Q8N1P7 616 aa8.28□□□□□ -1.08
PCNX4-210ENST00000555740 TXLNBQ8N3L3 684 aa8.28□□□□□ -1.08
PCNX4-210ENST00000555740 APPL2Q8NEU8 664 aa8.28□□□□□ -1.08
PCNX4-210ENST00000555740 SLC20A1Q8WUM9 679 aa8.28□□□□□ -1.08
PCNX4-210ENST00000555740 ELMO3Q96BJ8 720 aa8.28□□□□□ -1.08
PCNX4-210ENST00000555740 SENP8Q96LD8 212 aa8.28□□□□□ -1.08
PCNX4-210ENST00000555740 CCDC42Q96M95 316 aa8.28□□□□□ -1.08
PCNX4-210ENST00000555740 TWNKQ96RR1 684 aa8.28□□□□□ -1.08
PCNX4-210ENST00000555740 MRPL45Q9BRJ2 306 aaKnown RBP8.28□□□□□ -1.08
PCNX4-210ENST00000555740 ETNK1Q9HBU6 452 aa8.28□□□□□ -1.08
PCNX4-210ENST00000555740 HMGXB4Q9UGU5 601 aa8.28□□□□□ -1.08
PCNX4-210ENST00000555740 ATG2AQ2TAZ0 1938 aa8.28□□□□□ -1.08
PCNX4-210ENST00000555740 GOLGA6L9A6NEM1 432 aa8.28□□□□□ -1.08
PCNX4-210ENST00000555740 TBKBP1A7MCY6 615 aa8.28□□□□□ -1.08
PCNX4-210ENST00000555740 CYB561D2O14569 222 aa8.28□□□□□ -1.08
PCNX4-210ENST00000555740 HUS1O60921 280 aa8.28□□□□□ -1.08
PCNX4-210ENST00000555740 FGBP02675 491 aa8.28□□□□□ -1.08
PCNX4-210ENST00000555740 CCDC175P0C221 793 aa8.28□□□□□ -1.08
PCNX4-210ENST00000555740 LINC00271P0C7V0 271 aa8.28□□□□□ -1.08
PCNX4-210ENST00000555740 VDRP11473 427 aa8.28□□□□□ -1.08
PCNX4-210ENST00000555740 GZMAP12544 262 aa8.28□□□□□ -1.08
PCNX4-210ENST00000555740 KRT5P13647 590 aa8.28□□□□□ -1.08
PCNX4-210ENST00000555740 GNA15P30679 374 aa8.28□□□□□ -1.08
PCNX4-210ENST00000555740 SLC11A1P49279 550 aa8.28□□□□□ -1.08
PCNX4-210ENST00000555740 NDST1P52848 882 aa8.28□□□□□ -1.08
PCNX4-210ENST00000555740 GSCP56915 257 aaPredicted RBP8.28□□□□□ -1.08
PCNX4-210ENST00000555740 KRT83P78385 493 aa8.28□□□□□ -1.08
PCNX4-210ENST00000555740 ELAVL2Q12926 359 aaKnown RBP8.28□□□□□ -1.08
PCNX4-210ENST00000555740 CLEC16AQ2KHT3 1053 aa8.28□□□□□ -1.08
PCNX4-210ENST00000555740 TIGD5Q53EQ6 642 aa8.28□□□□□ -1.08
PCNX4-210ENST00000555740 GPR65Q8IYL9 337 aa8.28□□□□□ -1.08
PCNX4-210ENST00000555740 CCAR2Q8N163 923 aaKnown RBP8.28□□□□□ -1.08
PCNX4-210ENST00000555740 TMEM176AQ96HP8 235 aa8.28□□□□□ -1.08
PCNX4-210ENST00000555740 PKMYT1Q99640 499 aa8.28□□□□□ -1.08
PCNX4-210ENST00000555740 PAAF1Q9BRP4 392 aa8.28□□□□□ -1.08
PCNX4-210ENST00000555740 NT5C1AQ9BXI3 368 aa8.28□□□□□ -1.08
PCNX4-210ENST00000555740 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.28□□□□□ -1.08
PCNX4-210ENST00000555740 STK39Q9UEW8 545 aa8.28□□□□□ -1.08
PCNX4-210ENST00000555740 PPP2R2CQ9Y2T4 447 aa8.28□□□□□ -1.08
PCNX4-210ENST00000555740 A0A087X0T9 212 aa8.27□□□□□ -1.09
PCNX4-210ENST00000555740 MED7O43513 233 aa8.27□□□□□ -1.09
PCNX4-210ENST00000555740 WEE2P0C1S8 567 aa8.27□□□□□ -1.09
PCNX4-210ENST00000555740 FAM228BP0C875 321 aa8.27□□□□□ -1.09
PCNX4-210ENST00000555740 LAG3P18627 525 aa8.27□□□□□ -1.09
PCNX4-210ENST00000555740 FGFR3P22607 806 aa8.27□□□□□ -1.09
PCNX4-210ENST00000555740 FSHRP23945 695 aa8.27□□□□□ -1.09
PCNX4-210ENST00000555740 LHX1P48742 406 aa8.27□□□□□ -1.09
PCNX4-210ENST00000555740 VAV2P52735 878 aa8.27□□□□□ -1.09
PCNX4-210ENST00000555740 EPHA4P54764 986 aa8.27□□□□□ -1.09
PCNX4-210ENST00000555740 CENPCQ03188 943 aa8.27□□□□□ -1.09
PCNX4-210ENST00000555740 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.27□□□□□ -1.09
PCNX4-210ENST00000555740 ZNF365Q70YC5 407 aa8.27□□□□□ -1.09
PCNX4-210ENST00000555740 ZSWIM1Q9BR11 485 aa8.27□□□□□ -1.09
PCNX4-210ENST00000555740 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.27□□□□□ -1.09
PCNX4-210ENST00000555740 HERC2P3Q9BVR0 1158 aa8.27□□□□□ -1.09
PCNX4-210ENST00000555740 COLEC11Q9BWP8 271 aa8.27□□□□□ -1.09
PCNX4-210ENST00000555740 OXCT2Q9BYC2 517 aaPredicted RBP8.27□□□□□ -1.09
PCNX4-210ENST00000555740 ZNF518BQ9C0D4 1074 aa8.27□□□□□ -1.09
PCNX4-210ENST00000555740 LHX5Q9H2C1 402 aa8.27□□□□□ -1.09
PCNX4-210ENST00000555740 MTIF3Q9H2K0 278 aaKnown RBP8.27□□□□□ -1.09
PCNX4-210ENST00000555740 DNAJB4Q9UDY4 337 aa8.27□□□□□ -1.09
PCNX4-210ENST00000555740 NAGPAQ9UK23 515 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms