RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 SMG9Q9H0W8 520 aaKnown RBP26.16■■□□□ 1.78
PRKCH-216ENST00000555542 GDPD2Q9HCC8 539 aa26.16■■□□□ 1.78
PRKCH-216ENST00000555542 OBP2AQ9NY56 170 aa26.16■■□□□ 1.78
PRKCH-216ENST00000555542 NXF1Q9UBU9 619 aaKnown RBP26.16■■□□□ 1.78
PRKCH-216ENST00000555542 COL4A2P08572 1712 aa26.15■■□□□ 1.78
PRKCH-216ENST00000555542 PRAMEF12O95522 483 aa26.15■■□□□ 1.78
PRKCH-216ENST00000555542 PRR29P0C7W0 189 aa26.15■■□□□ 1.78
PRKCH-216ENST00000555542 DDX6P26196 483 aaKnown RBP eCLIP26.15■■□□□ 1.78
PRKCH-216ENST00000555542 ARHGAP29Q52LW3 1261 aa26.15■■□□□ 1.78
PRKCH-216ENST00000555542 ZC3H14Q6PJT7 736 aaKnown RBP26.15■■□□□ 1.78
PRKCH-216ENST00000555542 ASCL5Q7RTU5 278 aa26.15■■□□□ 1.78
PRKCH-216ENST00000555542 BPIFB1Q8TDL5 484 aa26.15■■□□□ 1.78
PRKCH-216ENST00000555542 ZNF516Q92618 1163 aa26.15■■□□□ 1.78
PRKCH-216ENST00000555542 SYAP1Q96A49 352 aaPredicted RBP26.15■■□□□ 1.78
PRKCH-216ENST00000555542 MRPL45Q9BRJ2 306 aaKnown RBP26.15■■□□□ 1.78
PRKCH-216ENST00000555542 SLC46A2Q9BY10 475 aa26.15■■□□□ 1.78
PRKCH-216ENST00000555542 THG1LQ9NWX6 298 aaKnown RBP26.15■■□□□ 1.78
PRKCH-216ENST00000555542 A0A1W2PQ27 194 aa26.14■■□□□ 1.78
PRKCH-216ENST00000555542 A0A1W2PQ64 194 aa26.14■■□□□ 1.78
PRKCH-216ENST00000555542 A0A1W2PQD8 194 aa26.14■■□□□ 1.78
PRKCH-216ENST00000555542 PRR23AA6NEV1 266 aa26.14■■□□□ 1.78
PRKCH-216ENST00000555542 SLC38A8A6NNN8 435 aa26.14■■□□□ 1.78
PRKCH-216ENST00000555542 F11P03951 625 aa26.14■■□□□ 1.78
PRKCH-216ENST00000555542 NR3C1P04150 777 aa26.14■■□□□ 1.78
PRKCH-216ENST00000555542 SP9P0CG40 484 aa26.14■■□□□ 1.78
PRKCH-216ENST00000555542 GNL1P36915 607 aaPredicted RBP26.14■■□□□ 1.78
PRKCH-216ENST00000555542 MYL6P60660 151 aa26.14■■□□□ 1.78
PRKCH-216ENST00000555542 CEP135Q66GS9 1140 aa26.14■■□□□ 1.78
PRKCH-216ENST00000555542 FAM171BQ6P995 826 aa26.14■■□□□ 1.78
PRKCH-216ENST00000555542 LIMS2Q7Z4I7 341 aa26.14■■□□□ 1.78
PRKCH-216ENST00000555542 CMTM8Q8IZV2 173 aa26.14■■□□□ 1.78
PRKCH-216ENST00000555542 CELF5Q8N6W0 485 aaKnown RBP26.14■■□□□ 1.78
PRKCH-216ENST00000555542 CCDC34Q96HJ3 373 aa26.14■■□□□ 1.78
PRKCH-216ENST00000555542 ZFYVE19Q96K21 471 aa26.14■■□□□ 1.78
PRKCH-216ENST00000555542 R4GN57 208 aa26.14■■□□□ 1.78
PRKCH-216ENST00000555542 ZNF638Q14966 1978 aaKnown RBP26.14■■□□□ 1.77
PRKCH-216ENST00000555542 PATJQ8NI35 1801 aa26.14■■□□□ 1.77
PRKCH-216ENST00000555542 OBSL1O75147 1896 aa26.13■■□□□ 1.77
PRKCH-216ENST00000555542 FAM237AA0A1B0GTK4 181 aa26.13■■□□□ 1.77
PRKCH-216ENST00000555542 PDXKO00764 312 aa26.13■■□□□ 1.77
PRKCH-216ENST00000555542 CALUO43852 315 aaPredicted RBP26.13■■□□□ 1.77
PRKCH-216ENST00000555542 CCNE1P24864 410 aa26.13■■□□□ 1.77
PRKCH-216ENST00000555542 ANXA13P27216 316 aa26.13■■□□□ 1.77
PRKCH-216ENST00000555542 ATICP31939 592 aa26.13■■□□□ 1.77
PRKCH-216ENST00000555542 GRIK1P39086 918 aa26.13■■□□□ 1.77
PRKCH-216ENST00000555542 AP3M2P53677 418 aa26.13■■□□□ 1.77
PRKCH-216ENST00000555542 TXNDC8Q6A555 127 aa26.13■■□□□ 1.77
PRKCH-216ENST00000555542 KRBA2Q6ZNG9 492 aa26.13■■□□□ 1.77
PRKCH-216ENST00000555542 TTC8Q8TAM2 541 aa26.13■■□□□ 1.77
PRKCH-216ENST00000555542 CLDN23Q96B33 292 aa26.13■■□□□ 1.77
PRKCH-216ENST00000555542 KCTD10Q9H3F6 313 aa26.13■■□□□ 1.77
PRKCH-216ENST00000555542 CRTAC1Q9NQ79 661 aa26.13■■□□□ 1.77
PRKCH-216ENST00000555542 FRMD4BQ9Y2L6 1034 aa26.13■■□□□ 1.77
PRKCH-216ENST00000555542 DENND4CQ5VZ89 1909 aa26.13■■□□□ 1.77
PRKCH-216ENST00000555542 LRRIQ3A6PVS8 624 aaPredicted RBP26.12■■□□□ 1.77
PRKCH-216ENST00000555542 ARNTLO00327 626 aa26.12■■□□□ 1.77
PRKCH-216ENST00000555542 TACC1O75410 805 aa26.12■■□□□ 1.77
PRKCH-216ENST00000555542 NOL4O94818 638 aa26.12■■□□□ 1.77
PRKCH-216ENST00000555542 BDNFP23560 247 aa26.12■■□□□ 1.77
PRKCH-216ENST00000555542 WEE1P30291 646 aa26.12■■□□□ 1.77
PRKCH-216ENST00000555542 MAGEA11P43364 429 aa26.12■■□□□ 1.77
PRKCH-216ENST00000555542 RPS9P46781 194 aaKnown RBP26.12■■□□□ 1.77
PRKCH-216ENST00000555542 PLCB2Q00722 1185 aa26.12■■□□□ 1.77
PRKCH-216ENST00000555542 ZNF699Q32M78 642 aa26.12■■□□□ 1.77
PRKCH-216ENST00000555542 MDH1BQ5I0G3 518 aa26.12■■□□□ 1.77
PRKCH-216ENST00000555542 TMEM150AQ86TG1 271 aa26.12■■□□□ 1.77
PRKCH-216ENST00000555542 SLC9A9Q8IVB4 645 aa26.12■■□□□ 1.77
PRKCH-216ENST00000555542 PARD3BQ8TEW8 1205 aa26.12■■□□□ 1.77
PRKCH-216ENST00000555542 MSANTD3Q96H12 275 aa26.12■■□□□ 1.77
PRKCH-216ENST00000555542 LRRC3BQ96PB8 259 aa26.12■■□□□ 1.77
PRKCH-216ENST00000555542 GZF1Q9H116 711 aaPredicted RBP26.12■■□□□ 1.77
PRKCH-216ENST00000555542 GOLPH3LQ9H4A5 285 aa26.12■■□□□ 1.77
PRKCH-216ENST00000555542 C8orf33Q9H7E9 229 aaPredicted RBP26.12■■□□□ 1.77
PRKCH-216ENST00000555542 TRPC7Q9HCX4 862 aa26.12■■□□□ 1.77
PRKCH-216ENST00000555542 ZNF202O95125 648 aa26.11■■□□□ 1.77
PRKCH-216ENST00000555542 SOX9P48436 509 aa26.11■■□□□ 1.77
PRKCH-216ENST00000555542 TDRD10Q5VZ19 366 aaKnown RBP26.11■■□□□ 1.77
PRKCH-216ENST00000555542 C1orf228Q6PIY5 440 aa26.11■■□□□ 1.77
PRKCH-216ENST00000555542 VSTM1Q6UX27 236 aa26.11■■□□□ 1.77
PRKCH-216ENST00000555542 TTC16Q8NEE8 873 aa26.11■■□□□ 1.77
PRKCH-216ENST00000555542 MYCBPAPQ8TBZ2 947 aa26.11■■□□□ 1.77
PRKCH-216ENST00000555542 PLEKHO2Q8TD55 490 aa26.11■■□□□ 1.77
PRKCH-216ENST00000555542 TRMT2BQ96GJ1 504 aaKnown RBP26.11■■□□□ 1.77
PRKCH-216ENST00000555542 PCED1BQ96HM7 432 aa26.11■■□□□ 1.77
PRKCH-216ENST00000555542 DMAC2Q9NW81 257 aa26.11■■□□□ 1.77
PRKCH-216ENST00000555542 GOLGA6L4A6NEF3 574 aa26.1■■□□□ 1.77
PRKCH-216ENST00000555542 SHISA7A6NL88 538 aa26.1■■□□□ 1.77
PRKCH-216ENST00000555542 A8MXQ7 604 aa26.1■■□□□ 1.77
PRKCH-216ENST00000555542 RHOBTB3O94955 611 aa26.1■■□□□ 1.77
PRKCH-216ENST00000555542 STAU1O95793 577 aaKnown RBP26.1■■□□□ 1.77
PRKCH-216ENST00000555542 CSTF1Q05048 431 aaKnown RBP26.1■■□□□ 1.77
PRKCH-216ENST00000555542 DPYDQ12882 1025 aa26.1■■□□□ 1.77
PRKCH-216ENST00000555542 NCOA4Q13772 614 aa26.1■■□□□ 1.77
PRKCH-216ENST00000555542 ZNF667Q5HYK9 610 aa26.1■■□□□ 1.77
PRKCH-216ENST00000555542 MON1AQ86VX9 555 aa26.1■■□□□ 1.77
PRKCH-216ENST00000555542 KIF9Q9HAQ2 790 aa26.1■■□□□ 1.77
PRKCH-216ENST00000555542 LMAN1LQ9HAT1 526 aa26.1■■□□□ 1.77
PRKCH-216ENST00000555542 TDP1Q9NUW8 608 aa26.1■■□□□ 1.77
PRKCH-216ENST00000555542 GTSE1Q9NYZ3 720 aa26.1■■□□□ 1.77
PRKCH-216ENST00000555542 FBXO4Q9UKT5 387 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms