RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 ASB16Q96NS5 453 aa14.61□□□□□ -0.07
SNX6-203ENST00000555416 SNX25Q9H3E2 840 aa14.61□□□□□ -0.07
SNX6-203ENST00000555416 ABCB6Q9NP58 842 aa14.61□□□□□ -0.07
SNX6-203ENST00000555416 PTPN1P18031 435 aaKnown RBP14.6□□□□□ -0.07
SNX6-203ENST00000555416 BDNFP23560 247 aa14.6□□□□□ -0.07
SNX6-203ENST00000555416 STX17P56962 302 aa14.6□□□□□ -0.07
SNX6-203ENST00000555416 FKBP3Q00688 224 aaKnown RBP14.6□□□□□ -0.07
SNX6-203ENST00000555416 SGSM1Q2NKQ1 1148 aa14.6□□□□□ -0.07
SNX6-203ENST00000555416 CFAP221Q4G0U5 840 aa14.6□□□□□ -0.07
SNX6-203ENST00000555416 ITIH5Q86UX2 942 aa14.6□□□□□ -0.07
SNX6-203ENST00000555416 SCN4BQ8IWT1 228 aa14.6□□□□□ -0.07
SNX6-203ENST00000555416 SIX5Q8N196 739 aa14.6□□□□□ -0.07
SNX6-203ENST00000555416 LEMD2Q8NC56 503 aa14.6□□□□□ -0.07
SNX6-203ENST00000555416 ZSCAN18Q8TBC5 510 aaPredicted RBP14.6□□□□□ -0.07
SNX6-203ENST00000555416 MYCBPAPQ8TBZ2 947 aa14.6□□□□□ -0.07
SNX6-203ENST00000555416 NELFBQ8WX92 580 aa14.6□□□□□ -0.07
SNX6-203ENST00000555416 DHTKD1Q96HY7 919 aaPredicted RBP14.6□□□□□ -0.07
SNX6-203ENST00000555416 LRRC3BQ96PB8 259 aa14.6□□□□□ -0.07
SNX6-203ENST00000555416 MED15Q96RN5 788 aa14.6□□□□□ -0.07
SNX6-203ENST00000555416 TSG101Q99816 390 aa14.6□□□□□ -0.07
SNX6-203ENST00000555416 B3GNT5Q9BYG0 378 aa14.6□□□□□ -0.07
SNX6-203ENST00000555416 ATXN3LQ9H3M9 355 aa14.6□□□□□ -0.07
SNX6-203ENST00000555416 CA14Q9ULX7 337 aa14.6□□□□□ -0.07
SNX6-203ENST00000555416 PTPRDP23468 1912 aa14.6□□□□□ -0.07
SNX6-203ENST00000555416 KMT2EQ8IZD2 1858 aa14.59□□□□□ -0.07
SNX6-203ENST00000555416 SLC38A8A6NNN8 435 aa14.59□□□□□ -0.07
SNX6-203ENST00000555416 A8MXQ7 604 aa14.59□□□□□ -0.07
SNX6-203ENST00000555416 PSMA7O14818 248 aa14.59□□□□□ -0.07
SNX6-203ENST00000555416 ECI2O75521 394 aa14.59□□□□□ -0.07
SNX6-203ENST00000555416 TADA3O75528 432 aa14.59□□□□□ -0.07
SNX6-203ENST00000555416 CLSTN1O94985 981 aa14.59□□□□□ -0.07
SNX6-203ENST00000555416 F11P03951 625 aa14.59□□□□□ -0.07
SNX6-203ENST00000555416 FAM163BP0C2L3 166 aa14.59□□□□□ -0.07
SNX6-203ENST00000555416 EPB41P11171 864 aaKnown RBP14.59□□□□□ -0.07
SNX6-203ENST00000555416 MAGEA11P43364 429 aa14.59□□□□□ -0.07
SNX6-203ENST00000555416 NLRP12P59046 1061 aa14.59□□□□□ -0.07
SNX6-203ENST00000555416 CYP27A1Q02318 531 aa14.59□□□□□ -0.07
SNX6-203ENST00000555416 LRRC63Q05C16 580 aa14.59□□□□□ -0.07
SNX6-203ENST00000555416 ENPEPQ07075 957 aa14.59□□□□□ -0.07
SNX6-203ENST00000555416 GRM2Q14416 872 aa14.59□□□□□ -0.07
SNX6-203ENST00000555416 VEPH1Q14D04 833 aa14.59□□□□□ -0.07
SNX6-203ENST00000555416 CBWD6Q4V339 395 aa14.59□□□□□ -0.07
SNX6-203ENST00000555416 CBWD3Q5JTY5 395 aa14.59□□□□□ -0.07
SNX6-203ENST00000555416 CBWD5Q5RIA9 395 aa14.59□□□□□ -0.07
SNX6-203ENST00000555416 GPR158Q5T848 1215 aa14.59□□□□□ -0.07
SNX6-203ENST00000555416 CWF19L1Q69YN2 538 aaKnown RBP14.59□□□□□ -0.07
SNX6-203ENST00000555416 VITQ6UXI7 678 aa14.59□□□□□ -0.07
SNX6-203ENST00000555416 PAQR9Q6ZVX9 377 aa14.59□□□□□ -0.07
SNX6-203ENST00000555416 MTSS1LQ765P7 747 aa14.59□□□□□ -0.07
SNX6-203ENST00000555416 SMARCD2Q92925 531 aa14.59□□□□□ -0.07
SNX6-203ENST00000555416 FUBP3Q96I24 572 aaKnown RBP eCLIP14.59□□□□□ -0.07
SNX6-203ENST00000555416 BCO2Q9BYV7 579 aa14.59□□□□□ -0.07
SNX6-203ENST00000555416 ZNF518BQ9C0D4 1074 aa14.59□□□□□ -0.07
SNX6-203ENST00000555416 TMEM8AQ9HCN3 771 aa14.59□□□□□ -0.07
SNX6-203ENST00000555416 SLC2A4RGQ9NR83 387 aa14.59□□□□□ -0.07
SNX6-203ENST00000555416 LMBRD1Q9NUN5 540 aa14.59□□□□□ -0.07
SNX6-203ENST00000555416 KIAA1468Q9P260 1216 aa14.59□□□□□ -0.07
SNX6-203ENST00000555416 MAGEC2Q9UBF1 373 aaPredicted RBP14.59□□□□□ -0.07
SNX6-203ENST00000555416 FBXL21Q9UKT6 434 aa14.59□□□□□ -0.07
SNX6-203ENST00000555416 MAGED2Q9UNF1 606 aaPredicted RBP14.59□□□□□ -0.07
SNX6-203ENST00000555416 CTNND2Q9UQB3 1225 aa14.59□□□□□ -0.07
SNX6-203ENST00000555416 SLC16A3O15427 465 aaKnown RBP14.58□□□□□ -0.08
SNX6-203ENST00000555416 PI15O43692 258 aa14.58□□□□□ -0.08
SNX6-203ENST00000555416 NOL4O94818 638 aa14.58□□□□□ -0.08
SNX6-203ENST00000555416 PRAMEF12O95522 483 aa14.58□□□□□ -0.08
SNX6-203ENST00000555416 USP46P62068 366 aa14.58□□□□□ -0.08
SNX6-203ENST00000555416 RPL10AP62906 217 aaKnown RBP14.58□□□□□ -0.08
SNX6-203ENST00000555416 NOP14P78316 857 aaKnown RBP14.58□□□□□ -0.08
SNX6-203ENST00000555416 C4orf50Q6ZRC1 276 aa14.58□□□□□ -0.08
SNX6-203ENST00000555416 ACOT1Q86TX2 421 aa14.58□□□□□ -0.08
SNX6-203ENST00000555416 TMEM105Q8N8V8 129 aa14.58□□□□□ -0.08
SNX6-203ENST00000555416 B3GALNT2Q8NCR0 500 aa14.58□□□□□ -0.08
SNX6-203ENST00000555416 TAF4BQ92750 862 aa14.58□□□□□ -0.08
SNX6-203ENST00000555416 SLC35C1Q96A29 364 aa14.58□□□□□ -0.08
SNX6-203ENST00000555416 ELSPBP1Q96BH3 223 aa14.58□□□□□ -0.08
SNX6-203ENST00000555416 TWNKQ96RR1 684 aa14.58□□□□□ -0.08
SNX6-203ENST00000555416 SLC46A2Q9BY10 475 aa14.58□□□□□ -0.08
SNX6-203ENST00000555416 SMG9Q9H0W8 520 aaKnown RBP14.58□□□□□ -0.08
SNX6-203ENST00000555416 CLSTN2Q9H4D0 955 aa14.58□□□□□ -0.08
SNX6-203ENST00000555416 SLITRK6Q9H5Y7 841 aa14.58□□□□□ -0.08
SNX6-203ENST00000555416 TRPV4Q9HBA0 871 aa14.58□□□□□ -0.08
SNX6-203ENST00000555416 ZFP14Q9HCL3 533 aa14.58□□□□□ -0.08
SNX6-203ENST00000555416 WNT16Q9UBV4 365 aa14.58□□□□□ -0.08
SNX6-203ENST00000555416 MUC6Q6W4X9 2439 aa14.57□□□□□ -0.08
SNX6-203ENST00000555416 OBSL1O75147 1896 aa14.57□□□□□ -0.08
SNX6-203ENST00000555416 GREB1Q4ZG55 1949 aa14.57□□□□□ -0.08
SNX6-203ENST00000555416 F8VP50 259 aa14.57□□□□□ -0.08
SNX6-203ENST00000555416 AVPR2P30518 371 aa14.57□□□□□ -0.08
SNX6-203ENST00000555416 GTF2H1P32780 548 aa14.57□□□□□ -0.08
SNX6-203ENST00000555416 MXI1P50539 228 aa14.57□□□□□ -0.08
SNX6-203ENST00000555416 NDST1P52848 882 aa14.57□□□□□ -0.08
SNX6-203ENST00000555416 DCAF17Q5H9S7 520 aaPredicted RBP14.57□□□□□ -0.08
SNX6-203ENST00000555416 KRT39Q6A163 491 aa14.57□□□□□ -0.08
SNX6-203ENST00000555416 ARID3BQ8IVW6 561 aaPredicted RBP14.57□□□□□ -0.08
SNX6-203ENST00000555416 FLCNQ8NFG4 579 aa14.57□□□□□ -0.08
SNX6-203ENST00000555416 WHAMMQ8TF30 809 aa14.57□□□□□ -0.08
SNX6-203ENST00000555416 TATDN2Q93075 761 aa14.57□□□□□ -0.08
SNX6-203ENST00000555416 MYRFLQ96LU7 910 aa14.57□□□□□ -0.08
SNX6-203ENST00000555416 IPO9Q96P70 1041 aaKnown RBP14.57□□□□□ -0.08
SNX6-203ENST00000555416 ARID3AQ99856 593 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms