RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 MGAT5BQ3V5L5 792 aa11.3□□□□□ -0.6
TMEM260-206ENST00000555046 CBWD6Q4V339 395 aa11.3□□□□□ -0.6
TMEM260-206ENST00000555046 CBWD3Q5JTY5 395 aa11.3□□□□□ -0.6
TMEM260-206ENST00000555046 CBWD5Q5RIA9 395 aa11.3□□□□□ -0.6
TMEM260-206ENST00000555046 CYP4A22Q5TCH4 519 aa11.3□□□□□ -0.6
TMEM260-206ENST00000555046 FAM171BQ6P995 826 aa11.3□□□□□ -0.6
TMEM260-206ENST00000555046 VSTM1Q6UX27 236 aa11.3□□□□□ -0.6
TMEM260-206ENST00000555046 OTOP3Q7RTS5 596 aa11.3□□□□□ -0.6
TMEM260-206ENST00000555046 DGLUCYQ7Z3D6 616 aa11.3□□□□□ -0.6
TMEM260-206ENST00000555046 CRYBG2Q8N1P7 616 aa11.3□□□□□ -0.6
TMEM260-206ENST00000555046 C12orf76Q8N812 135 aaPredicted RBP11.3□□□□□ -0.6
TMEM260-206ENST00000555046 ATAD1Q8NBU5 361 aa11.3□□□□□ -0.6
TMEM260-206ENST00000555046 EHBP1Q8NDI1 1231 aa11.3□□□□□ -0.6
TMEM260-206ENST00000555046 MYCBPAPQ8TBZ2 947 aa11.3□□□□□ -0.6
TMEM260-206ENST00000555046 JAKMIP2Q96AA8 810 aa11.3□□□□□ -0.6
TMEM260-206ENST00000555046 ACSF2Q96CM8 615 aaPredicted RBP11.3□□□□□ -0.6
TMEM260-206ENST00000555046 RMDN1Q96DB5 314 aa11.3□□□□□ -0.6
TMEM260-206ENST00000555046 FAM84AQ96KN4 292 aa11.3□□□□□ -0.6
TMEM260-206ENST00000555046 NT5C1BQ96P26 610 aa11.3□□□□□ -0.6
TMEM260-206ENST00000555046 BPIFA3Q9BQP9 254 aa11.3□□□□□ -0.6
TMEM260-206ENST00000555046 SYT15Q9BQS2 421 aa11.3□□□□□ -0.6
TMEM260-206ENST00000555046 TUBGCP2Q9BSJ2 902 aa11.3□□□□□ -0.6
TMEM260-206ENST00000555046 BCO2Q9BYV7 579 aa11.3□□□□□ -0.6
TMEM260-206ENST00000555046 WDR6Q9NNW5 1121 aaKnown RBP11.3□□□□□ -0.6
TMEM260-206ENST00000555046 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.3□□□□□ -0.66e-6■■□□□ 12.3
TMEM260-206ENST00000555046 GTF3C4Q9UKN8 822 aa11.3□□□□□ -0.6
TMEM260-206ENST00000555046 KIAA1257Q9ULG3 409 aa11.3□□□□□ -0.6
TMEM260-206ENST00000555046 POLIQ9UNA4 740 aa11.3□□□□□ -0.6
TMEM260-206ENST00000555046 USTQ9Y2C2 406 aa11.3□□□□□ -0.6
TMEM260-206ENST00000555046 INSL5Q9Y5Q6 135 aa11.3□□□□□ -0.6
TMEM260-206ENST00000555046 ZFP37Q9Y6Q3 630 aaPredicted RBP11.3□□□□□ -0.6
TMEM260-206ENST00000555046 ASH1LQ9NR48 2969 aaKnown RBP11.3□□□□□ -0.6
TMEM260-206ENST00000555046 ATP8B3O60423 1300 aa11.3□□□□□ -0.6
TMEM260-206ENST00000555046 CITO14578 2027 aa11.3□□□□□ -0.6
TMEM260-206ENST00000555046 TDRD15B5MCY1 1934 aaKnown RBP11.29□□□□□ -0.6
TMEM260-206ENST00000555046 MTMR11A4FU01 709 aa11.29□□□□□ -0.6
TMEM260-206ENST00000555046 KCNJ18B7U540 433 aa11.29□□□□□ -0.6
TMEM260-206ENST00000555046 MICAL2O94851 1124 aa11.29□□□□□ -0.6
TMEM260-206ENST00000555046 WEE2P0C1S8 567 aa11.29□□□□□ -0.6
TMEM260-206ENST00000555046 OR4Q2P0C623 313 aa11.29□□□□□ -0.6
TMEM260-206ENST00000555046 LMO2P25791 158 aa11.29□□□□□ -0.6
TMEM260-206ENST00000555046 MAGEA11P43364 429 aa11.29□□□□□ -0.6
TMEM260-206ENST00000555046 VCPP55072 806 aaKnown RBP11.29□□□□□ -0.6
TMEM260-206ENST00000555046 KCNJ12Q14500 433 aa11.29□□□□□ -0.6
TMEM260-206ENST00000555046 ST3GAL2Q16842 350 aa11.29□□□□□ -0.6
TMEM260-206ENST00000555046 CFAP221Q4G0U5 840 aa11.29□□□□□ -0.6
TMEM260-206ENST00000555046 VWA3BQ502W6 1294 aa11.29□□□□□ -0.6
TMEM260-206ENST00000555046 TCP11X2Q5H9J9 407 aa11.29□□□□□ -0.6
TMEM260-206ENST00000555046 GBP6Q6ZN66 633 aa11.29□□□□□ -0.6
TMEM260-206ENST00000555046 ENOSF1Q7L5Y1 443 aa11.29□□□□□ -0.6
TMEM260-206ENST00000555046 LRRTM3Q86VH5 581 aa11.29□□□□□ -0.6
TMEM260-206ENST00000555046 ADHFE1Q8IWW8 467 aa11.29□□□□□ -0.6
TMEM260-206ENST00000555046 SUGP1Q8IWZ8 645 aaKnown RBP11.29□□□□□ -0.6
TMEM260-206ENST00000555046 OR10T2Q8NGX3 314 aa11.29□□□□□ -0.6
TMEM260-206ENST00000555046 KBTBD7Q8WVZ9 684 aa11.29□□□□□ -0.6
TMEM260-206ENST00000555046 PGLYRP2Q96PD5 576 aa11.29□□□□□ -0.6
TMEM260-206ENST00000555046 RTP3Q9BQQ7 232 aa11.29□□□□□ -0.6
TMEM260-206ENST00000555046 MRPL45Q9BRJ2 306 aaKnown RBP11.29□□□□□ -0.6
TMEM260-206ENST00000555046 PI4K2AQ9BTU6 479 aa11.29□□□□□ -0.6
TMEM260-206ENST00000555046 APOL5Q9BWW9 433 aa11.29□□□□□ -0.6
TMEM260-206ENST00000555046 NT5C1AQ9BXI3 368 aa11.29□□□□□ -0.6
TMEM260-206ENST00000555046 ASPMQ8IZT6 3477 aa11.29□□□□□ -0.6
TMEM260-206ENST00000555046 NLRC5Q86WI3 1866 aa11.28□□□□□ -0.6
TMEM260-206ENST00000555046 TMEM221A6NGB7 291 aa11.28□□□□□ -0.6
TMEM260-206ENST00000555046 M0R296 226 aa11.28□□□□□ -0.6
TMEM260-206ENST00000555046 PES1O00541 588 aaKnown RBP11.28□□□□□ -0.6
TMEM260-206ENST00000555046 CCL16O15467 120 aa11.28□□□□□ -0.6
TMEM260-206ENST00000555046 RFPL2O75678 378 aa11.28□□□□□ -0.6
TMEM260-206ENST00000555046 HAPLN1P10915 354 aaPredicted RBP11.28□□□□□ -0.6
TMEM260-206ENST00000555046 ACAT1P24752 427 aaKnown RBP11.28□□□□□ -0.6
TMEM260-206ENST00000555046 ASPAP45381 313 aa11.28□□□□□ -0.6
TMEM260-206ENST00000555046 ZNF165P49910 485 aa11.28□□□□□ -0.6
TMEM260-206ENST00000555046 NDST1P52848 882 aa11.28□□□□□ -0.6
TMEM260-206ENST00000555046 CDH8P55286 799 aa11.28□□□□□ -0.6
TMEM260-206ENST00000555046 SLC8A3P57103 927 aa11.28□□□□□ -0.6
TMEM260-206ENST00000555046 INCA1Q0VD86 236 aa11.28□□□□□ -0.6
TMEM260-206ENST00000555046 TWF1Q12792 350 aa11.28□□□□□ -0.6
TMEM260-206ENST00000555046 EXOC3L4Q17RC7 722 aa11.28□□□□□ -0.6
TMEM260-206ENST00000555046 FKBP15Q5T1M5 1219 aa11.28□□□□□ -0.6
TMEM260-206ENST00000555046 SCARA3Q6AZY7 606 aa11.28□□□□□ -0.6
TMEM260-206ENST00000555046 IRF2BP1Q8IU81 584 aa11.28□□□□□ -0.6
TMEM260-206ENST00000555046 FAM200AQ8TCP9 573 aa11.28□□□□□ -0.6
TMEM260-206ENST00000555046 SEMA4DQ92854 862 aa11.28□□□□□ -0.6
TMEM260-206ENST00000555046 PBXIP1Q96AQ6 731 aa11.28□□□□□ -0.6
TMEM260-206ENST00000555046 MED15Q96RN5 788 aa11.28□□□□□ -0.6
TMEM260-206ENST00000555046 SEPT5Q99719 369 aaPredicted RBP11.28□□□□□ -0.6
TMEM260-206ENST00000555046 GPR88Q9GZN0 384 aa11.28□□□□□ -0.6
TMEM260-206ENST00000555046 IRF2BPLQ9H1B7 796 aa11.28□□□□□ -0.6
TMEM260-206ENST00000555046 DNAJC25Q9H1X3 360 aa11.28□□□□□ -0.6
TMEM260-206ENST00000555046 NDST4Q9H3R1 872 aa11.28□□□□□ -0.6
TMEM260-206ENST00000555046 SMYD3Q9H7B4 428 aa11.28□□□□□ -0.6
TMEM260-206ENST00000555046 APOBEC3GQ9HC16 384 aaKnown RBP11.28□□□□□ -0.6
TMEM260-206ENST00000555046 AVENQ9NQS1 362 aaPredicted RBP11.28□□□□□ -0.6
TMEM260-206ENST00000555046 FANCLQ9NW38 375 aa11.28□□□□□ -0.6
TMEM260-206ENST00000555046 ABI2Q9NYB9 513 aaPredicted RBP11.28□□□□□ -0.6
TMEM260-206ENST00000555046 ZMYM5Q9UJ78 669 aa11.28□□□□□ -0.6
TMEM260-206ENST00000555046 SLC27A5Q9Y2P5 690 aa11.28□□□□□ -0.6
TMEM260-206ENST00000555046 GCN1Q92616 2671 aaKnown RBP11.28□□□□□ -0.6
TMEM260-206ENST00000555046 SYCE3A1L190 88 aa11.27□□□□□ -0.61
TMEM260-206ENST00000555046 MYBPHLA2RUH7 354 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms